RNA–Protein interactions for RNA: ENST00000584322.1

BRIP1-206, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 3

Gene BRIP1, Length 716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-206ENST00000584322 SPSB2Q99619 263 aa12.83□□□□□ -0.36
BRIP1-206ENST00000584322 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
BRIP1-206ENST00000584322 EIF5P55010 431 aaKnown RBP12.82□□□□□ -0.36
BRIP1-206ENST00000584322 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
BRIP1-206ENST00000584322 KRT24Q2M2I5 525 aa12.82□□□□□ -0.36
BRIP1-206ENST00000584322 MSS51Q4VC12 460 aa12.82□□□□□ -0.36
BRIP1-206ENST00000584322 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
BRIP1-206ENST00000584322 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
BRIP1-206ENST00000584322 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
BRIP1-206ENST00000584322 FKBPLQ9UIM3 349 aa12.82□□□□□ -0.36
BRIP1-206ENST00000584322 SCN7AQ01118 1682 aa12.82□□□□□ -0.36
BRIP1-206ENST00000584322 PTPRCP08575 1304 aa12.82□□□□□ -0.36
BRIP1-206ENST00000584322 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
BRIP1-206ENST00000584322 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
BRIP1-206ENST00000584322 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
BRIP1-206ENST00000584322 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
BRIP1-206ENST00000584322 NUP98P52948 1817 aa12.81□□□□□ -0.36
BRIP1-206ENST00000584322 COL15A1P39059 1388 aa12.81□□□□□ -0.36
BRIP1-206ENST00000584322 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 ANKRD36CQ5JPF3 1778 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 PRAMEF22A3QJZ6 481 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
BRIP1-206ENST00000584322 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
BRIP1-206ENST00000584322 EIF2S2P20042 333 aaKnown RBP12.8□□□□□ -0.36
BRIP1-206ENST00000584322 CTHP32929 405 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 NR1H3Q13133 447 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 KRTAP3-3Q9BYR6 98 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 KRTAP3-2Q9BYR7 98 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 ZBTB1Q9Y2K1 713 aa12.8□□□□□ -0.36
BRIP1-206ENST00000584322 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
BRIP1-206ENST00000584322 ARFGEF2Q9Y6D5 1785 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
BRIP1-206ENST00000584322 IPO8O15397 1037 aaKnown RBP12.79□□□□□ -0.36
BRIP1-206ENST00000584322 COPS2P61201 443 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 SLC15A2Q16348 729 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
BRIP1-206ENST00000584322 CLEC4GQ6UXB4 293 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
BRIP1-206ENST00000584322 SSH1Q8WYL5 1049 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 KCTD12Q96CX2 325 aaKnown RBP12.79□□□□□ -0.36
BRIP1-206ENST00000584322 PPP1R12CQ9BZL4 782 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 STK32BQ9NY57 414 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
BRIP1-206ENST00000584322 A1BGP04217 495 aa12.78□□□□□ -0.36
BRIP1-206ENST00000584322 CCNYL3P0C7X3 344 aa12.78□□□□□ -0.36
BRIP1-206ENST00000584322 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
BRIP1-206ENST00000584322 TRAIPQ9BWF2 469 aa12.78□□□□□ -0.36
BRIP1-206ENST00000584322 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
BRIP1-206ENST00000584322 ZBBXA8MT70 800 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.37
BRIP1-206ENST00000584322 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 ARMC2Q8NEN0 867 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 PBXIP1Q96AQ6 731 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 EVA1BQ9NVM1 165 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 MAP10Q9P2G4 905 aa12.77□□□□□ -0.37
BRIP1-206ENST00000584322 MMP16P51512 607 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 PDE4CQ08493 712 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 KIF6Q6ZMV9 814 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
BRIP1-206ENST00000584322 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
BRIP1-206ENST00000584322 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
BRIP1-206ENST00000584322 RFX1P22670 979 aa12.75□□□□□ -0.37
BRIP1-206ENST00000584322 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
BRIP1-206ENST00000584322 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
BRIP1-206ENST00000584322 RNF123Q5XPI4 1314 aa12.75□□□□□ -0.37
BRIP1-206ENST00000584322 MAP3K15Q6ZN16 1313 aa12.75□□□□□ -0.37
BRIP1-206ENST00000584322 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
BRIP1-206ENST00000584322 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
BRIP1-206ENST00000584322 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
BRIP1-206ENST00000584322 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
BRIP1-206ENST00000584322 TRIM28Q13263 835 aaKnown RBP12.74□□□□□ -0.37
BRIP1-206ENST00000584322 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
BRIP1-206ENST00000584322 KSR2Q6VAB6 950 aa12.74□□□□□ -0.37
BRIP1-206ENST00000584322 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
BRIP1-206ENST00000584322 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
BRIP1-206ENST00000584322 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
BRIP1-206ENST00000584322 PNPLA7Q6ZV29 1317 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 ZPR1O75312 459 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 MYL6BP14649 208 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 RFC4P35249 363 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 KCNQ4P56696 695 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 FKBP5Q13451 457 aaPredicted RBP12.73□□□□□ -0.37
BRIP1-206ENST00000584322 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
BRIP1-206ENST00000584322 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms