RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
CHTOP-206ENST00000495554 DTNBO60941 627 aa17.53■□□□□ 0.4
CHTOP-206ENST00000495554 GREM2Q9H772 168 aa17.53■□□□□ 0.4
CHTOP-206ENST00000495554 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
CHTOP-206ENST00000495554 ADORA1P30542 326 aa17.52■□□□□ 0.4
CHTOP-206ENST00000495554 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.4
CHTOP-206ENST00000495554 BBXQ8WY36 941 aaPredicted RBP17.52■□□□□ 0.4
CHTOP-206ENST00000495554 IRS4O14654 1257 aaPredicted RBP17.52■□□□□ 0.39
CHTOP-206ENST00000495554 TOM1O60784 492 aa17.52■□□□□ 0.39
CHTOP-206ENST00000495554 Q6ZUG5 572 aa17.52■□□□□ 0.39
CHTOP-206ENST00000495554 FAM184AQ8NB25 1140 aa17.52■□□□□ 0.39
CHTOP-206ENST00000495554 RNF214Q8ND24 703 aa17.52■□□□□ 0.39
CHTOP-206ENST00000495554 GTF3C6Q969F1 213 aa17.52■□□□□ 0.39
CHTOP-206ENST00000495554 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.39
CHTOP-206ENST00000495554 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
CHTOP-206ENST00000495554 ITGA6P23229 1130 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 STK3Q13188 491 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 ITPK1Q13572 414 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 LOC102724428A0A0B4J2F2 783 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 CTSWP56202 376 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 SIK1P57059 783 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 KRT85P78386 507 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 LRRFIP1Q32MZ4 808 aaKnown RBP17.51■□□□□ 0.39
CHTOP-206ENST00000495554 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
CHTOP-206ENST00000495554 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
CHTOP-206ENST00000495554 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
CHTOP-206ENST00000495554 A0A0G2JS52 829 aa17.5■□□□□ 0.39
CHTOP-206ENST00000495554 KCNQ2O43526 872 aa17.5■□□□□ 0.39
CHTOP-206ENST00000495554 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
CHTOP-206ENST00000495554 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
CHTOP-206ENST00000495554 SPEF2Q9C093 1822 aa17.5■□□□□ 0.39
CHTOP-206ENST00000495554 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
CHTOP-206ENST00000495554 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
CHTOP-206ENST00000495554 NWD2Q9ULI1 1742 aa17.49■□□□□ 0.39
CHTOP-206ENST00000495554 MAST3O60307 1309 aa17.49■□□□□ 0.39
CHTOP-206ENST00000495554 ELP1O95163 1332 aa17.49■□□□□ 0.39
CHTOP-206ENST00000495554 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
CHTOP-206ENST00000495554 PDE8AO60658 829 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
CHTOP-206ENST00000495554 TTC39AQ5SRH9 613 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 STOX1Q6ZVD7 989 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 BCCIPQ9P287 314 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHTOP-206ENST00000495554 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHTOP-206ENST00000495554 SCARF1Q14162 830 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 SUSD4Q5VX71 490 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 BRF1Q92994 677 aa17.48■□□□□ 0.39
CHTOP-206ENST00000495554 ANKRD18BA2A2Z9 1011 aa17.47■□□□□ 0.39
CHTOP-206ENST00000495554 ZFYP08048 801 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-206ENST00000495554 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
CHTOP-206ENST00000495554 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-206ENST00000495554 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
CHTOP-206ENST00000495554 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
CHTOP-206ENST00000495554 SCAND2PQ9GZW5 306 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-206ENST00000495554 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-206ENST00000495554 LLPHQ9BRT6 129 aaKnown RBP17.47■□□□□ 0.39
CHTOP-206ENST00000495554 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 NOL7Q9UMY1 257 aaKnown RBP17.46■□□□□ 0.39
CHTOP-206ENST00000495554 MYH3P11055 1940 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 ABCC12Q96J65 1359 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 PFKFB2O60825 505 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 EXOSC10Q01780 885 aaKnown RBP17.46■□□□□ 0.39
CHTOP-206ENST00000495554 METTL24Q5JXM2 366 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 AGXT2Q9BYV1 514 aa17.46■□□□□ 0.39
CHTOP-206ENST00000495554 JAK2O60674 1132 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 ATP2B3Q16720 1220 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 FAM98CQ17RN3 349 aaKnown RBP17.45■□□□□ 0.38
CHTOP-206ENST00000495554 E7EWF7 191 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 RRP9O43818 475 aaKnown RBP17.45■□□□□ 0.38
CHTOP-206ENST00000495554 SCRN1Q12765 414 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
CHTOP-206ENST00000495554 M0R2C6 588 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 ZAP70P43403 619 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 PI16Q6UXB8 463 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 RREB1Q92766 1687 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 HCLS1P14317 486 aaPredicted RBP17.44■□□□□ 0.38
CHTOP-206ENST00000495554 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 SMARCC2Q8TAQ2 1214 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 CCDC39Q9UFE4 941 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 CTNNA3Q9UI47 895 aa17.44■□□□□ 0.38
CHTOP-206ENST00000495554 PDE8BO95263 885 aa17.43■□□□□ 0.38
CHTOP-206ENST00000495554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHTOP-206ENST00000495554 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
CHTOP-206ENST00000495554 AK7Q96M32 723 aa17.43■□□□□ 0.38
CHTOP-206ENST00000495554 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
CHTOP-206ENST00000495554 FAM177BA6PVY3 158 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 H3BQV1 296 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 IFFO2Q5TF58 517 aa17.42■□□□□ 0.38
CHTOP-206ENST00000495554 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms