RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 KRT222Q8N1A0 295 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 TRAIPQ9BWF2 469 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 SAMD15Q9P1V8 674 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 EPS15L1Q9UBC2 864 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 ITIH3Q06033 890 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 E2F5Q15329 346 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 NFKBIBQ15653 356 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 CRACR2BQ8N4Y2 399 aaPredicted RBP6.09□□□□□ -1.43
USF3-202ENST00000478658 NOX5Q96PH1 765 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 C22orf23Q9BZE7 217 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 I3L4J1 428 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 AK2P54819 239 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 YWHAEP62258 255 aaKnown RBP6.09□□□□□ -1.43
USF3-202ENST00000478658 ARID5AQ03989 594 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 RUFY3Q7L099 469 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 PLCB1Q9NQ66 1216 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 C16orf62Q7Z3J2 963 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 HAUS1Q96CS2 278 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 NUP62CLQ9H1M0 184 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 TCP11L1Q9NUJ3 509 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 MPP6Q9NZW5 540 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 SLC13A4Q9UKG4 626 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 MTRF1O75570 445 aaKnown RBP6.09□□□□□ -1.43
USF3-202ENST00000478658 BAG3O95817 575 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 PRKCQQ04759 706 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 ZSCAN29Q8IWY8 852 aaPredicted RBP6.09□□□□□ -1.43
USF3-202ENST00000478658 CCDC65Q8IXS2 484 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 EFCAB13Q8IY85 973 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 DTNBP1Q96EV8 351 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
USF3-202ENST00000478658 NFKBIL1Q9UBC1 381 aaPredicted RBP6.09□□□□□ -1.43
USF3-202ENST00000478658 ESYT2A0FGR8 921 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 SKOR1P84550 965 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 NEDD9Q14511 834 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 B4GALNT3Q6L9W6 998 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 HDXQ7Z353 690 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 TEX9Q8N6V9 391 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 FSIP1Q8NA03 581 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 SYTL4Q96C24 671 aaPredicted RBP6.09□□□□□ -1.44
USF3-202ENST00000478658 TXLNGQ9NUQ3 528 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 SLC8A2Q9UPR5 921 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 LOC105371045A0A1W2PR82 267 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 PPARGP37231 505 aaPredicted RBP6.09□□□□□ -1.44
USF3-202ENST00000478658 IGHMBP2P38935 993 aaKnown RBP6.09□□□□□ -1.44
USF3-202ENST00000478658 COG7P83436 770 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 SNX30Q5VWJ9 437 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 AFAP1L1Q8TED9 768 aa6.09□□□□□ -1.44
USF3-202ENST00000478658 SCG3Q8WXD2 468 aaKnown RBP6.09□□□□□ -1.44
USF3-202ENST00000478658 FMN1Q68DA7 1419 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 ZNF197O14709 1029 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 OCM2P0CE71 109 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 OCMP0CE72 109 aaPredicted RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 PPP6R1Q9UPN7 881 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 SOX12O15370 315 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 GSNP06396 782 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 PIP4K2BP78356 416 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 CEP85Q6P2H3 762 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 FAM200AQ8TCP9 573 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 OTUB1Q96FW1 271 aaPredicted RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 BIN1O00499 593 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 KCNA4P22459 653 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 ARHGAP4P98171 946 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 CAVIN4Q5BKX8 364 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 CEP126Q9P2H0 1117 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 GOLGA8AA7E2F4 631 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 GOLGA8BA8MQT2 603 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 CDC45O75419 566 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 P4HA1P13674 534 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 HLTFQ14527 1009 aaKnown RBP eCLIP6.08□□□□□ -1.44
USF3-202ENST00000478658 CCDC121Q6ZUS5 278 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 NLRP13Q86W25 1043 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 ZCRB1Q8TBF4 217 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 NHEJ1Q9H9Q4 299 aaPredicted RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 NOP56O00567 594 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 RRP9O43818 475 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 UBTFL1P0CB47 393 aaPredicted RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 CYP26C1Q6V0L0 522 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 PDZD4Q76G19 769 aaPredicted RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 UPF3BQ9BZI7 483 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 DONSONQ9NYP3 566 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 TSPY1Q01534 308 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 NOL8Q76FK4 1167 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 SRLQ86TD4 932 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 ST13P5Q8NFI4 369 aaPredicted RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 CSRNP1Q96S65 589 aa6.08□□□□□ -1.44
USF3-202ENST00000478658 SRRTQ9BXP5 876 aaKnown RBP6.08□□□□□ -1.44
USF3-202ENST00000478658 GHRP10912 638 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 SMTNP53814 917 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 TUBB2AQ13885 445 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 CYTH1Q15438 398 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 LCA5Q86VQ0 697 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 TUBB2BQ9BVA1 445 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 GLT8D2Q9H1C3 349 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 CYP46A1Q9Y6A2 500 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 TXNDC9O14530 226 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 KRT7P08729 469 aa6.07□□□□□ -1.44
USF3-202ENST00000478658 GABPAQ06546 454 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms