RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 GRIK5Q16478 980 aa9.47□□□□□ -0.89
RFXAP-202ENST00000472888 MUC3BQ9H195 1237 aa9.47□□□□□ -0.89
RFXAP-202ENST00000472888 NDUFB5O43674 189 aa9.46□□□□□ -0.9
RFXAP-202ENST00000472888 TXNDC2Q86VQ3 553 aa9.46□□□□□ -0.9
RFXAP-202ENST00000472888 IL22RA1Q8N6P7 574 aa9.46□□□□□ -0.9
RFXAP-202ENST00000472888 TP53INP1Q96A56 240 aa9.46□□□□□ -0.9
RFXAP-202ENST00000472888 FZD6O60353 706 aa9.45□□□□□ -0.9
RFXAP-202ENST00000472888 KIF4AO95239 1232 aa9.45□□□□□ -0.9
RFXAP-202ENST00000472888 NEFLP07196 543 aa9.45□□□□□ -0.9
RFXAP-202ENST00000472888 NRG1Q02297 640 aaPredicted RBP9.45□□□□□ -0.9
RFXAP-202ENST00000472888 CEP135Q66GS9 1140 aa9.45□□□□□ -0.9
RFXAP-202ENST00000472888 FMR1NBQ8N0W7 255 aaPredicted RBP9.45□□□□□ -0.9
RFXAP-202ENST00000472888 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
RFXAP-202ENST00000472888 PHACTR2O75167 634 aa9.44□□□□□ -0.9
RFXAP-202ENST00000472888 CYP2E1P05181 493 aaPredicted RBP9.44□□□□□ -0.9
RFXAP-202ENST00000472888 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
RFXAP-202ENST00000472888 MAP4K3Q8IVH8 894 aa9.44□□□□□ -0.9
RFXAP-202ENST00000472888 C1orf127Q8N9H9 656 aa9.44□□□□□ -0.9
RFXAP-202ENST00000472888 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
RFXAP-202ENST00000472888 CCDC87Q9NVE4 849 aa9.44□□□□□ -0.9
RFXAP-202ENST00000472888 CNTN3Q9P232 1028 aa9.44□□□□□ -0.9
RFXAP-202ENST00000472888 A6NHS1 94 aa9.43□□□□□ -0.9
RFXAP-202ENST00000472888 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
RFXAP-202ENST00000472888 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
RFXAP-202ENST00000472888 GJD3Q8N144 294 aa9.43□□□□□ -0.9
RFXAP-202ENST00000472888 PBX4Q9BYU1 374 aa9.43□□□□□ -0.9
RFXAP-202ENST00000472888 KANSL3Q9P2N6 904 aa9.43□□□□□ -0.9
RFXAP-202ENST00000472888 TNFRSF21O75509 655 aa9.42□□□□□ -0.9
RFXAP-202ENST00000472888 CEP120Q8N960 986 aa9.42□□□□□ -0.9
RFXAP-202ENST00000472888 CITED4Q96RK1 184 aa9.42□□□□□ -0.9
RFXAP-202ENST00000472888 USP21Q9UK80 565 aa9.42□□□□□ -0.9
RFXAP-202ENST00000472888 TRIM33Q9UPN9 1127 aa9.42□□□□□ -0.9
RFXAP-202ENST00000472888 PPME1Q9Y570 386 aa9.42□□□□□ -0.9
RFXAP-202ENST00000472888 EDN3P14138 238 aa9.41□□□□□ -0.9
RFXAP-202ENST00000472888 ATP11AP98196 1134 aa9.41□□□□□ -0.9
RFXAP-202ENST00000472888 FAM117BQ6P1L5 589 aa9.41□□□□□ -0.9
RFXAP-202ENST00000472888 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
RFXAP-202ENST00000472888 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
RFXAP-202ENST00000472888 SALL4Q9UJQ4 1053 aa9.41□□□□□ -0.9
RFXAP-202ENST00000472888 PTPRAP18433 802 aa9.4□□□□□ -0.9
RFXAP-202ENST00000472888 CDC27P30260 824 aa9.4□□□□□ -0.9
RFXAP-202ENST00000472888 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
RFXAP-202ENST00000472888 LACRTQ9GZZ8 138 aa9.4□□□□□ -0.9
RFXAP-202ENST00000472888 RNF112Q9ULX5 631 aa9.4□□□□□ -0.9
RFXAP-202ENST00000472888 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.9
RFXAP-202ENST00000472888 CABP4P57796 275 aa9.39□□□□□ -0.91
RFXAP-202ENST00000472888 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
RFXAP-202ENST00000472888 AMOTL2Q9Y2J4 779 aa9.39□□□□□ -0.91
RFXAP-202ENST00000472888 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
RFXAP-202ENST00000472888 BIN2Q9UBW5 565 aaPredicted RBP9.38□□□□□ -0.91
RFXAP-202ENST00000472888 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
RFXAP-202ENST00000472888 CHRDQ9H2X0 955 aa9.37□□□□□ -0.91
RFXAP-202ENST00000472888 ZFYVE28Q9HCC9 887 aa9.37□□□□□ -0.91
RFXAP-202ENST00000472888 FOXD3Q9UJU5 478 aaPredicted RBP9.37□□□□□ -0.91
RFXAP-202ENST00000472888 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
RFXAP-202ENST00000472888 PDE2AO00408 941 aaPredicted RBP9.36□□□□□ -0.91
RFXAP-202ENST00000472888 EREGO14944 169 aa9.36□□□□□ -0.91
RFXAP-202ENST00000472888 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
RFXAP-202ENST00000472888 POP1Q99575 1024 aaKnown RBP9.36□□□□□ -0.91
RFXAP-202ENST00000472888 DZANK1Q9NVP4 752 aa9.36□□□□□ -0.91
RFXAP-202ENST00000472888 LINC01387J3KSC0 135 aa9.35□□□□□ -0.91
RFXAP-202ENST00000472888 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
RFXAP-202ENST00000472888 NOS3P29474 1203 aa9.35□□□□□ -0.91
RFXAP-202ENST00000472888 KCNA1Q09470 495 aa9.35□□□□□ -0.91
RFXAP-202ENST00000472888 ECM1Q16610 540 aa9.35□□□□□ -0.91
RFXAP-202ENST00000472888 OSMRQ99650 979 aa9.35□□□□□ -0.91
RFXAP-202ENST00000472888 DLL1O00548 723 aa9.34□□□□□ -0.91
RFXAP-202ENST00000472888 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
RFXAP-202ENST00000472888 MEGF10Q96KG7 1140 aa9.34□□□□□ -0.91
RFXAP-202ENST00000472888 ADAM19Q9H013 955 aa9.34□□□□□ -0.91
RFXAP-202ENST00000472888 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
RFXAP-202ENST00000472888 CDC25BP30305 580 aa9.33□□□□□ -0.92
RFXAP-202ENST00000472888 IREB2P48200 963 aaKnown RBP9.33□□□□□ -0.92
RFXAP-202ENST00000472888 TMEM102Q8N9M5 508 aaPredicted RBP9.33□□□□□ -0.92
RFXAP-202ENST00000472888 KLHL23Q8NBE8 558 aa9.33□□□□□ -0.92
RFXAP-202ENST00000472888 DMRTB1Q96MA1 342 aa9.33□□□□□ -0.92
RFXAP-202ENST00000472888 ARL4DP49703 201 aa9.32□□□□□ -0.92
RFXAP-202ENST00000472888 WNT8BQ93098 351 aa9.32□□□□□ -0.92
RFXAP-202ENST00000472888 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
RFXAP-202ENST00000472888 TRAIPQ9BWF2 469 aa9.32□□□□□ -0.92
RFXAP-202ENST00000472888 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
RFXAP-202ENST00000472888 COL17A1Q9UMD9 1497 aaPredicted RBP9.32□□□□□ -0.92
RFXAP-202ENST00000472888 H3BRJ5 948 aa9.31□□□□□ -0.92
RFXAP-202ENST00000472888 CPNE3O75131 537 aaKnown RBP9.31□□□□□ -0.92
RFXAP-202ENST00000472888 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
RFXAP-202ENST00000472888 BSNDQ8WZ55 320 aa9.31□□□□□ -0.92
RFXAP-202ENST00000472888 NXPE3Q969Y0 559 aa9.31□□□□□ -0.92
RFXAP-202ENST00000472888 FAM129BQ96TA1 746 aa9.31□□□□□ -0.92
RFXAP-202ENST00000472888 SEC31BQ9NQW1 1179 aa9.31□□□□□ -0.92
RFXAP-202ENST00000472888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.31□□□□□ -0.92
RFXAP-202ENST00000472888 NFKBIEO00221 500 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 FSCN2O14926 492 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
RFXAP-202ENST00000472888 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 TXNDC11Q6PKC3 985 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 PRR23CQ6ZRP0 262 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 RBCK1Q9BYM8 510 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 AKTIPQ9H8T0 292 aa9.3□□□□□ -0.92
RFXAP-202ENST00000472888 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms