RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SLC51AQ86UW1 340 aa6.99□□□□□ -1.29
SSR3-204ENST00000467733 TTC9Q92623 222 aa6.99□□□□□ -1.29
SSR3-204ENST00000467733 LPIN3Q9BQK8 851 aa6.99□□□□□ -1.29
SSR3-204ENST00000467733 ABCC1P33527 1531 aa6.99□□□□□ -1.29
SSR3-204ENST00000467733 CPS1P31327 1500 aa6.98□□□□□ -1.29
SSR3-204ENST00000467733 CLTCQ00610 1675 aaKnown RBP6.98□□□□□ -1.29
SSR3-204ENST00000467733 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
SSR3-204ENST00000467733 DKK1O94907 266 aa6.98□□□□□ -1.29
SSR3-204ENST00000467733 CPB1P15086 417 aa6.98□□□□□ -1.29
SSR3-204ENST00000467733 IREB2P48200 963 aaKnown RBP6.98□□□□□ -1.29
SSR3-204ENST00000467733 HDGFL1Q5TGJ6 251 aa6.98□□□□□ -1.29
SSR3-204ENST00000467733 EFCAB2Q5VUJ9 269 aa6.98□□□□□ -1.29
SSR3-204ENST00000467733 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
SSR3-204ENST00000467733 BTBD11A6QL63 1104 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 UBTFP17480 764 aaKnown RBP6.97□□□□□ -1.29
SSR3-204ENST00000467733 RASA1P20936 1047 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 NOS3P29474 1203 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 HSPA1LP34931 641 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 GPLD1P80108 840 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 GRIK5Q16478 980 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 PERM1Q5SV97 790 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 DHX32Q7L7V1 743 aaKnown RBP6.97□□□□□ -1.29
SSR3-204ENST00000467733 TRPM4Q8TD43 1214 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
SSR3-204ENST00000467733 LRRIQ1Q96JM4 1722 aa6.96□□□□□ -1.29
SSR3-204ENST00000467733 INPP5BP32019 993 aa6.96□□□□□ -1.3
SSR3-204ENST00000467733 ARSDP51689 593 aa6.96□□□□□ -1.3
SSR3-204ENST00000467733 PRR23CQ6ZRP0 262 aa6.96□□□□□ -1.3
SSR3-204ENST00000467733 BCS1LQ9Y276 419 aa6.96□□□□□ -1.3
SSR3-204ENST00000467733 ALKQ9UM73 1620 aa6.96□□□□□ -1.3
SSR3-204ENST00000467733 NEURL4Q96JN8 1562 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 IGFBP4P22692 258 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 IDH3AP50213 366 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 MCTP1Q6DN14 999 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 AFAP1Q8N556 730 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 GOLGA2P5Q9HBQ8 144 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
SSR3-204ENST00000467733 CDC42BPAQ5VT25 1732 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 PLXNC1O60486 1568 aa6.95□□□□□ -1.3
SSR3-204ENST00000467733 TROQ12816 1431 aaPredicted RBP6.94□□□□□ -1.3
SSR3-204ENST00000467733 RARAP10276 462 aa6.94□□□□□ -1.3
SSR3-204ENST00000467733 GRNP28799 593 aaKnown RBP6.94□□□□□ -1.3
SSR3-204ENST00000467733 NRLP54845 237 aa6.94□□□□□ -1.3
SSR3-204ENST00000467733 LARP1Q6PKG0 1096 aaKnown RBP6.94□□□□□ -1.3
SSR3-204ENST00000467733 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
SSR3-204ENST00000467733 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
SSR3-204ENST00000467733 SAMD9LQ8IVG5 1584 aa6.94□□□□□ -1.3
SSR3-204ENST00000467733 DNMT1P26358 1616 aaKnown RBP6.94□□□□□ -1.3
SSR3-204ENST00000467733 RNF17Q9BXT8 1623 aaKnown RBP6.94□□□□□ -1.3
SSR3-204ENST00000467733 CLIP1P30622 1438 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 A2ML1A8K2U0 1454 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 KRT25Q7Z3Z0 450 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
SSR3-204ENST00000467733 SMG9Q9H0W8 520 aaKnown RBP6.93□□□□□ -1.3
SSR3-204ENST00000467733 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 PCMTD2Q9NV79 361 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 INO80Q9ULG1 1556 aaPredicted RBP6.93□□□□□ -1.3
SSR3-204ENST00000467733 ZMYM3Q14202 1370 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 PTPRKQ15262 1439 aa6.93□□□□□ -1.3
SSR3-204ENST00000467733 SHANK2Q9UPX8 1470 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 SYNMO15061 1565 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 VWDEQ8N2E2 1590 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 ZBTB42B2RXF5 422 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 DLL1O00548 723 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 TOM1O60784 492 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 DEAF1O75398 565 aaPredicted RBP6.92□□□□□ -1.3
SSR3-204ENST00000467733 FSTP19883 344 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 PIP4K2BP78356 416 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
SSR3-204ENST00000467733 MAFBQ9Y5Q3 323 aaPredicted RBP6.92□□□□□ -1.3
SSR3-204ENST00000467733 FMN1Q68DA7 1419 aa6.92□□□□□ -1.3
SSR3-204ENST00000467733 ATP7AQ04656 1500 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 PAX4O43316 350 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 EIF2AK2P19525 551 aaKnown RBP6.91□□□□□ -1.3
SSR3-204ENST00000467733 TARSP26639 723 aaKnown RBP6.91□□□□□ -1.3
SSR3-204ENST00000467733 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
SSR3-204ENST00000467733 DGKZQ13574 1117 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 TMEM130Q8N3G9 435 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 IFT43Q96FT9 208 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 KLK14Q9P0G3 267 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 EEA1Q15075 1411 aa6.91□□□□□ -1.3
SSR3-204ENST00000467733 DEPDC5O75140 1603 aa6.9□□□□□ -1.3
SSR3-204ENST00000467733 ADGBQ8N7X0 1667 aa6.9□□□□□ -1.3
SSR3-204ENST00000467733 STRCP1A6NGW2 1772 aa6.9□□□□□ -1.3
SSR3-204ENST00000467733 GSC2O15499 205 aa6.9□□□□□ -1.3
SSR3-204ENST00000467733 FOXO3O43524 673 aa6.9□□□□□ -1.3
SSR3-204ENST00000467733 RANGAP1P46060 587 aaPredicted RBP6.9□□□□□ -1.3
SSR3-204ENST00000467733 PLAURQ03405 335 aa6.9□□□□□ -1.3
SSR3-204ENST00000467733 CDK11AQ9UQ88 783 aaPredicted RBP6.9□□□□□ -1.3
SSR3-204ENST00000467733 SYCP2Q9BX26 1530 aa6.9□□□□□ -1.31
SSR3-204ENST00000467733 IQGAP1P46940 1657 aa6.9□□□□□ -1.31
SSR3-204ENST00000467733 SETD1AO15047 1707 aaKnown RBP6.9□□□□□ -1.31
SSR3-204ENST00000467733 SRCAPQ6ZRS2 3230 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 F8W735 103 aaPredicted RBP6.89□□□□□ -1.31
SSR3-204ENST00000467733 PTCD1O75127 700 aaKnown RBP6.89□□□□□ -1.31
SSR3-204ENST00000467733 SASH3O75995 380 aa6.89□□□□□ -1.31
SSR3-204ENST00000467733 MICAL2O94851 1124 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms