RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 NOLC1Q14978 699 aaKnown RBP eCLIP29.32■■■□□ 2.28
LMBR1-209ENST00000434453 SASS6Q6UVJ0 657 aa29.32■■■□□ 2.28
LMBR1-209ENST00000434453 KCNF1Q9H3M0 494 aa29.32■■■□□ 2.28
LMBR1-209ENST00000434453 HSPA2P54652 639 aa29.32■■■□□ 2.28
LMBR1-209ENST00000434453 NCOA5Q9HCD5 579 aaKnown RBP29.32■■■□□ 2.28
LMBR1-209ENST00000434453 CEP126Q9P2H0 1117 aa29.32■■■□□ 2.28
LMBR1-209ENST00000434453 CCT2P78371 535 aaKnown RBP29.31■■■□□ 2.28
LMBR1-209ENST00000434453 NAA16Q6N069 864 aaPredicted RBP29.31■■■□□ 2.28
LMBR1-209ENST00000434453 ANO6Q4KMQ2 910 aa29.3■■■□□ 2.28
LMBR1-209ENST00000434453 CHST3Q7LGC8 479 aa29.3■■■□□ 2.28
LMBR1-209ENST00000434453 BICD2Q8TD16 824 aa29.3■■■□□ 2.28
LMBR1-209ENST00000434453 CBX8Q9HC52 389 aa29.3■■■□□ 2.28
LMBR1-209ENST00000434453 SPTLC3Q9NUV7 552 aa29.3■■■□□ 2.28
LMBR1-209ENST00000434453 FTOQ9C0B1 505 aaKnown RBP eCLIP29.29■■■□□ 2.28
LMBR1-209ENST00000434453 PDIA3P30101 505 aaKnown RBP29.29■■■□□ 2.28
LMBR1-209ENST00000434453 FOSBP53539 338 aa29.29■■■□□ 2.28
LMBR1-209ENST00000434453 FKBP4Q02790 459 aaKnown RBP eCLIP29.29■■■□□ 2.28
LMBR1-209ENST00000434453 CCDC57Q2TAC2 916 aa29.29■■■□□ 2.28
LMBR1-209ENST00000434453 XAGE2Q96GT9 111 aa29.29■■■□□ 2.28
LMBR1-209ENST00000434453 CFAP45Q9UL16 551 aa29.29■■■□□ 2.28
LMBR1-209ENST00000434453 HMGN5P82970 282 aaKnown RBP29.28■■■□□ 2.28
LMBR1-209ENST00000434453 TRIM28Q13263 835 aaKnown RBP29.28■■■□□ 2.28
LMBR1-209ENST00000434453 SCARF1Q14162 830 aa29.28■■■□□ 2.28
LMBR1-209ENST00000434453 MYH7P12883 1935 aa29.28■■■□□ 2.28
LMBR1-209ENST00000434453 SPC24Q8NBT2 197 aa29.27■■■□□ 2.28
LMBR1-209ENST00000434453 STRN4Q9NRL3 753 aa29.27■■■□□ 2.28
LMBR1-209ENST00000434453 PPFIA3O75145 1194 aa29.26■■■□□ 2.28
LMBR1-209ENST00000434453 CEBPZQ03701 1054 aaKnown RBP29.26■■■□□ 2.28
LMBR1-209ENST00000434453 ZNF274Q96GC6 653 aaPredicted RBP29.26■■■□□ 2.28
LMBR1-209ENST00000434453 FAM89AQ96GI7 184 aa29.26■■■□□ 2.28
LMBR1-209ENST00000434453 CCDC85AQ96PX6 553 aaPredicted RBP29.26■■■□□ 2.28
LMBR1-209ENST00000434453 RCOR1Q9UKL0 485 aa29.26■■■□□ 2.28
LMBR1-209ENST00000434453 GPHNQ9NQX3 736 aaPredicted RBP29.26■■■□□ 2.27
LMBR1-209ENST00000434453 ZNF330Q9Y3S2 320 aaPredicted RBP29.26■■■□□ 2.27
LMBR1-209ENST00000434453 FBXL16Q8N461 479 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 PLA2G12BQ9BX93 195 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 FBXO3Q9UK99 471 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 DDX60Q8IY21 1712 aaKnown RBP29.25■■■□□ 2.27
LMBR1-209ENST00000434453 PCCAP05165 728 aaPredicted RBP29.25■■■□□ 2.27
LMBR1-209ENST00000434453 CSF1RP07333 972 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 RBM10P98175 930 aaKnown RBP29.25■■■□□ 2.27
LMBR1-209ENST00000434453 ILDR1Q86SU0 546 aaPredicted RBP29.25■■■□□ 2.27
LMBR1-209ENST00000434453 ASAP1Q9ULH1 1129 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 PYCARDQ9ULZ3 195 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 AKAP11Q9UKA4 1901 aa29.25■■■□□ 2.27
LMBR1-209ENST00000434453 EVCP57679 992 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 CCDC158Q5M9N0 1113 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 TTC39AQ5SRH9 613 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 KIAA1524Q8TCG1 905 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 FDPSP14324 419 aaKnown RBP29.24■■■□□ 2.27
LMBR1-209ENST00000434453 DNAJC10Q8IXB1 793 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 SYNE4Q8N205 404 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 USP28Q96RU2 1077 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 TMOD3Q9NYL9 352 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 AKAP2Q9Y2D5 859 aa29.24■■■□□ 2.27
LMBR1-209ENST00000434453 UBE2Q2Q8WVN8 375 aa29.23■■■□□ 2.27
LMBR1-209ENST00000434453 RIC1Q4ADV7 1423 aa29.23■■■□□ 2.27
LMBR1-209ENST00000434453 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.23■■■□□ 2.27
LMBR1-209ENST00000434453 PI16Q6UXB8 463 aa29.22■■■□□ 2.27
LMBR1-209ENST00000434453 CARMIL3Q8ND23 1372 aa29.22■■■□□ 2.27
LMBR1-209ENST00000434453 TDRD7Q8NHU6 1098 aaKnown RBP29.22■■■□□ 2.27
LMBR1-209ENST00000434453 DNAJC25Q9H1X3 360 aa29.22■■■□□ 2.27
LMBR1-209ENST00000434453 GOLPH3LQ9H4A5 285 aa29.22■■■□□ 2.27
LMBR1-209ENST00000434453 SLAIN2Q9P270 581 aa29.22■■■□□ 2.27
LMBR1-209ENST00000434453 NAP1L2Q9ULW6 460 aaPredicted RBP29.22■■■□□ 2.27
LMBR1-209ENST00000434453 ITGB4P16144 1822 aa29.22■■■□□ 2.27
LMBR1-209ENST00000434453 DYNC1I1O14576 645 aa29.21■■■□□ 2.27
LMBR1-209ENST00000434453 ZAP70P43403 619 aa29.21■■■□□ 2.27
LMBR1-209ENST00000434453 GORABQ5T7V8 394 aa29.21■■■□□ 2.27
LMBR1-209ENST00000434453 ZBTB38Q8NAP3 1195 aaPredicted RBP29.21■■■□□ 2.27
LMBR1-209ENST00000434453 PIGBQ92521 554 aa29.21■■■□□ 2.27
LMBR1-209ENST00000434453 HAND2P61296 217 aa29.21■■■□□ 2.27
LMBR1-209ENST00000434453 GUCY1B3Q02153 619 aa29.21■■■□□ 2.27
LMBR1-209ENST00000434453 PUS7LQ9H0K6 701 aaKnown RBP29.21■■■□□ 2.27
LMBR1-209ENST00000434453 FGAP02671 866 aa29.2■■■□□ 2.27
LMBR1-209ENST00000434453 DNTTIP2Q5QJE6 756 aaKnown RBP29.2■■■□□ 2.27
LMBR1-209ENST00000434453 PDCL3Q9H2J4 239 aa29.2■■■□□ 2.27
LMBR1-209ENST00000434453 KIF3AQ9Y496 699 aa29.2■■■□□ 2.27
LMBR1-209ENST00000434453 MYO5AQ9Y4I1 1855 aaKnown RBP29.2■■■□□ 2.26
LMBR1-209ENST00000434453 TPM3P06753 285 aa29.2■■■□□ 2.26
LMBR1-209ENST00000434453 ZFYP08048 801 aaPredicted RBP29.2■■■□□ 2.26
LMBR1-209ENST00000434453 ZNF165P49910 485 aa29.2■■■□□ 2.26
LMBR1-209ENST00000434453 SNW1Q13573 536 aaKnown RBP29.2■■■□□ 2.26
LMBR1-209ENST00000434453 WASHC4Q2M389 1173 aa29.2■■■□□ 2.26
LMBR1-209ENST00000434453 HSP90AB3PQ58FF7 597 aa29.2■■■□□ 2.26
LMBR1-209ENST00000434453 IFIT5Q13325 482 aaKnown RBP29.19■■■□□ 2.26
LMBR1-209ENST00000434453 CCAR1Q8IX12 1150 aaKnown RBP29.19■■■□□ 2.26
LMBR1-209ENST00000434453 PLA2G4DQ86XP0 818 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 MYRIPQ8NFW9 859 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 RIPOR2Q9Y4F9 1068 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 MYH3P11055 1940 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 PTGS1P23219 599 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 KIF6Q6ZMV9 814 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 VSIG10Q8N0Z9 540 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 APPBP2Q92624 585 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 FAM13BQ9NYF5 915 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 CTNNA3Q9UI47 895 aa29.18■■■□□ 2.26
LMBR1-209ENST00000434453 EVA1CP58658 441 aa29.17■■■□□ 2.26
LMBR1-209ENST00000434453 HLFQ16534 295 aa29.17■■■□□ 2.26
LMBR1-209ENST00000434453 ATL3Q6DD88 541 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms