RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 RRP9O43818 475 aaKnown RBP20.58■□□□□ 0.89
TRAF3IP1-201ENST00000373327 NR1I2O75469 434 aa20.58■□□□□ 0.89
TRAF3IP1-201ENST00000373327 SLC3A2P08195 630 aaKnown RBP20.58■□□□□ 0.89
TRAF3IP1-201ENST00000373327 TNNT1P13805 278 aa20.58■□□□□ 0.89
TRAF3IP1-201ENST00000373327 PCMTD1Q96MG8 357 aaPredicted RBP20.58■□□□□ 0.89
TRAF3IP1-201ENST00000373327 SPDYE4A6NLX3 237 aa20.58■□□□□ 0.88
TRAF3IP1-201ENST00000373327 SNAP23O00161 211 aa20.58■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ANO10Q9NW15 660 aa20.58■□□□□ 0.88
TRAF3IP1-201ENST00000373327 JMYQ8N9B5 988 aa20.58■□□□□ 0.88
TRAF3IP1-201ENST00000373327 TPM3P06753 285 aa20.57■□□□□ 0.88
TRAF3IP1-201ENST00000373327 PHKBQ93100 1093 aa20.57■□□□□ 0.88
TRAF3IP1-201ENST00000373327 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
TRAF3IP1-201ENST00000373327 SPECC1Q5M775 1068 aa20.57■□□□□ 0.88
TRAF3IP1-201ENST00000373327 TMC6Q7Z403 805 aa20.57■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ATP6V1AP38606 617 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 MAGEB6Q8N7X4 407 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 PCDH11XQ9BZA7 1347 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 PCDH11YQ9BZA8 1340 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 GPAA1O43292 621 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 SLC5A1P13866 664 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 PPP1R9BQ96SB3 815 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ZSCAN16Q9H4T2 348 aaPredicted RBP20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 HOOK1Q9UJC3 728 aaKnown RBP20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 E7EWF7 191 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 UVSSAQ2YD98 709 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 NOL10Q9BSC4 688 aaKnown RBP20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 GJB4Q9NTQ9 266 aa20.56■□□□□ 0.88
TRAF3IP1-201ENST00000373327 NIP7Q9Y221 180 aaKnown RBP eCLIP20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 hCG_1642624A0A1W2PR95 340 aa20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 CDKL5O76039 1030 aa20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 KCNQ4P56696 695 aa20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 NECTIN1Q15223 517 aa20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 CMTR1Q8N1G2 835 aaKnown RBP20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 MNS1Q8NEH6 495 aa20.55■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ADGRB2O60241 1585 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 CPLX3Q8WVH0 158 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 CBX8Q9HC52 389 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ATP2B2Q01814 1243 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 LRMPQ12912 555 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 HSPD1P10809 573 aaKnown RBP20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 PRKCSHP14314 528 aaPredicted RBP20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 XBP1P17861 261 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 STX1AQ16623 288 aa20.54■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ZBTB43O43298 467 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 DDIT3P35638 169 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 PRDM1O75626 825 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ZNF771Q7L3S4 317 aaPredicted RBP20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 SCRN1Q12765 414 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 USP28Q96RU2 1077 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 DHX8Q14562 1220 aaKnown RBP20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 GTF3C6Q969F1 213 aa20.53■□□□□ 0.88
TRAF3IP1-201ENST00000373327 MRPS27Q92552 414 aaKnown RBP20.52■□□□□ 0.88
TRAF3IP1-201ENST00000373327 ARMT1Q9H993 441 aa20.52■□□□□ 0.88
TRAF3IP1-201ENST00000373327 MBD4O95243 580 aa20.52■□□□□ 0.87
TRAF3IP1-201ENST00000373327 CYP7A1P22680 504 aa20.52■□□□□ 0.87
TRAF3IP1-201ENST00000373327 SLAIN2Q9P270 581 aa20.52■□□□□ 0.87
TRAF3IP1-201ENST00000373327 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 PTPN14Q15678 1187 aa20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 DLC1Q96QB1 1528 aa20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 SPTLC2O15270 562 aa20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 CTDSPL2Q05D32 466 aa20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 SSRP1Q08945 709 aaKnown RBP20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NRKQ7Z2Y5 1582 aa20.51■□□□□ 0.87
TRAF3IP1-201ENST00000373327 ADD1P35611 737 aaKnown RBP20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 AMOTL1Q8IY63 956 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 PDCL2Q8N4E4 241 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 HAUS7Q99871 368 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 BRMS1Q9HCU9 246 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 GREM2Q9H772 168 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 IGSF3O75054 1194 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 SKILP12757 684 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 SYKP43405 635 aa20.5■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NRBP1Q9UHY1 535 aa20.49■□□□□ 0.87
TRAF3IP1-201ENST00000373327 PTPN21Q16825 1174 aa20.49■□□□□ 0.87
TRAF3IP1-201ENST00000373327 TTC14Q96N46 770 aa20.49■□□□□ 0.87
TRAF3IP1-201ENST00000373327 FGAP02671 866 aa20.49■□□□□ 0.87
TRAF3IP1-201ENST00000373327 AFMP43652 599 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 HELLSQ9NRZ9 838 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 ZFYP08048 801 aaPredicted RBP20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 PDIA4P13667 645 aaKnown RBP20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 TCIRG1Q13488 830 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 MEX3CQ5U5Q3 659 aaKnown RBP20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 A0A0G2JLW4 131 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 PDE4CQ08493 712 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NEURL4Q96JN8 1562 aa20.48■□□□□ 0.87
TRAF3IP1-201ENST00000373327 NPHP4O75161 1426 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms