RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 USP16Q9Y5T5 823 aa8.2□□□□□ -1.1
RAB5B-201ENST00000360299 KCNQ3O43525 872 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 SSFA2P28290 1259 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 OTUD7BQ6GQQ9 843 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 TBC1D2Q9BYX2 928 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 PHAXQ9H814 394 aaKnown RBP8.19□□□□□ -1.1
RAB5B-201ENST00000360299 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 ITGA6P23229 1130 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 SLC16A10Q8TF71 515 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 GOLIM4O00461 696 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 LDHBP07195 334 aaKnown RBP8.19□□□□□ -1.1
RAB5B-201ENST00000360299 RPS8P62241 208 aaKnown RBP8.19□□□□□ -1.1
RAB5B-201ENST00000360299 HOMER1Q86YM7 354 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 CTCFLQ8NI51 663 aaPredicted RBP8.19□□□□□ -1.1
RAB5B-201ENST00000360299 SMCR8Q8TEV9 937 aaPredicted RBP8.19□□□□□ -1.1
RAB5B-201ENST00000360299 NCOA3Q9Y6Q9 1424 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 RLBP1P12271 317 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 GTF2IP78347 998 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 MASTLQ96GX5 879 aa8.19□□□□□ -1.1
RAB5B-201ENST00000360299 CCDC178Q5BJE1 867 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 FAM43AQ8N2R8 423 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 DBNDD1Q9H9R9 158 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 USP32Q8NFA0 1604 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 IQCA1LA6NCM1 817 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 NPR1P16066 1061 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 WWC2Q6AWC2 1192 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 KIAA0825Q8IV33 1275 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 CCDC83Q8IWF9 413 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 TMTC2Q8N394 836 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 HOOK2Q96ED9 719 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 NUP62CLQ9H1M0 184 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 RAD50Q92878 1312 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 PPP1R12BO60237 982 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-201ENST00000360299 HIBADHP31937 336 aaKnown RBP8.18□□□□□ -1.1
RAB5B-201ENST00000360299 IL6STP40189 918 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-201ENST00000360299 ARHGEF6Q15052 776 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 SNX21Q969T3 373 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 SCLT1Q96NL6 688 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 NEK1Q96PY6 1258 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 MAGEC2Q9UBF1 373 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-201ENST00000360299 PTPRUQ92729 1446 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 CYP27B1O15528 508 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 TAF5LO75529 589 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 GPS2Q13227 327 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 TTLL7Q6ZT98 887 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 SMARCE1Q969G3 411 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 ESYT1Q9BSJ8 1104 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 FHDC1Q9C0D6 1143 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-201ENST00000360299 BMP2KQ9NSY1 1161 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-201ENST00000360299 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 MST1RQ04912 1400 aa8.18□□□□□ -1.1
RAB5B-201ENST00000360299 AOX1Q06278 1338 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 C2orf69Q8N8R5 385 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 NCOA7Q8NI08 942 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 C8orf76Q96K31 380 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 ZNF277Q9NRM2 450 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 SLC12A7Q9Y666 1083 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 RANBP6O60518 1105 aaKnown RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 ADRA2BP18089 450 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 TCP10Q12799 353 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CIAPIN1Q6FI81 312 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 NAA16Q6N069 864 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CEP57L1Q8IYX8 460 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 UPF1Q92900 1129 aaKnown RBP eCLIP8.17□□□□□ -1.13e-9■■□□□ 13.3
RAB5B-201ENST00000360299 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CTAGE5O15320 804 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CYP7A1P22680 504 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 MCMDC2Q4G0Z9 681 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 RNF214Q8ND24 703 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 METTL22Q9BUU2 404 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 ATG3Q9NT62 314 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 R3HCC1Q9Y3T6 440 aaKnown RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 KIF13AQ9H1H9 1805 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 ERBB4Q15303 1308 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 IGSF1Q8N6C5 1336 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 A0A0U1RQG5 324 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CBFA2T2O43439 604 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 ZNF76P36508 570 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 EPS15P42566 896 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 CEBPZQ03701 1054 aaKnown RBP8.17□□□□□ -1.1
RAB5B-201ENST00000360299 PDE4BQ07343 736 aa8.17□□□□□ -1.1
RAB5B-201ENST00000360299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 TNFAIP1Q13829 316 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 CRNKL1Q9BZJ0 848 aaKnown RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 CNNM2Q9H8M5 875 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 DCCP43146 1447 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 IFIT3O14879 490 aaKnown RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 KIF5BP33176 963 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 CATIPQ7Z7H3 387 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 IVNS1ABPQ9Y6Y0 642 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 MCM5P33992 734 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 SEC63Q9UGP8 760 aaKnown RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 CD163L1Q9NR16 1453 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 EPB41L2O43491 1005 aaKnown RBP8.16□□□□□ -1.1
RAB5B-201ENST00000360299 OFD1O75665 1012 aa8.16□□□□□ -1.1
RAB5B-201ENST00000360299 SMC2O95347 1197 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms