RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 SBF2Q86WG5 1849 aa12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 CLSTN1O94985 981 aa12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 INTS5Q6P9B9 1019 aaKnown RBP12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 PIBF1Q8WXW3 757 aa12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 COL5A3P25940 1745 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 GADD45BO75293 160 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 CCT2P78371 535 aaKnown RBP12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 FOXO4P98177 505 aa12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 RAB3GAP1Q15042 981 aa12.3□□□□□ -0.44
CAPRIN1-201ENST00000341394 FAM196AQ6ZSG2 479 aa12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 KINO60870 393 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 DNM1Q05193 864 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 NUP62CLQ9H1M0 184 aa12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 PI4K2BQ8TCG2 481 aa12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 MAP7D2Q96T17 732 aa12.29□□□□□ -0.44
CAPRIN1-201ENST00000341394 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 RXRBP28702 533 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 RBM6P78332 1123 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 RRP12Q5JTH9 1297 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 ERCC4Q92889 916 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.443e-9■■□□□ 14.2
CAPRIN1-201ENST00000341394 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 H7C1W4 665 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 RFC4P35249 363 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 KRT85P78386 507 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 HMGN5P82970 282 aaKnown RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 NFXL1Q6ZNB6 911 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 KIF2CQ99661 725 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 COL4A1P02462 1669 aa12.28□□□□□ -0.44
CAPRIN1-201ENST00000341394 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.44
CAPRIN1-201ENST00000341394 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.44
CAPRIN1-201ENST00000341394 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.44
CAPRIN1-201ENST00000341394 TAF1P21675 1872 aa12.27□□□□□ -0.44
CAPRIN1-201ENST00000341394 TNNT1P13805 278 aa12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 RNF20Q5VTR2 975 aa12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 SYNE3Q6ZMZ3 975 aa12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 RABL6Q3YEC7 729 aaPredicted RBP12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 CEP126Q9P2H0 1117 aa12.27□□□□□ -0.45
CAPRIN1-201ENST00000341394 UTP14AQ9BVJ6 771 aaKnown RBP12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 TMEM63CQ9P1W3 806 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 VGLL3A8MV65 326 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 CHGBP05060 677 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 GJB2P29033 226 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 EIF5P55010 431 aaKnown RBP12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 BLOC1S2Q6QNY1 142 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 NLRP10Q86W26 655 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 ZBTB38Q8NAP3 1195 aaPredicted RBP12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 ZKSCAN5Q9Y2L8 839 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 RREB1Q92766 1687 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 RAD21O60216 631 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 FKBP4Q02790 459 aaKnown RBP eCLIP12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 LRSAM1Q6UWE0 723 aa12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 PUS3Q9BZE2 481 aaKnown RBP12.26□□□□□ -0.45
CAPRIN1-201ENST00000341394 MYH3P11055 1940 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 NOC3LQ8WTT2 800 aaKnown RBP12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 APBA3O96018 575 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 PCCAP05165 728 aaPredicted RBP12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 STK38Q15208 465 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 LRRC24Q50LG9 513 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 TRAPPC3LQ5T215 181 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 CHST3Q7LGC8 479 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 TFCP2Q12800 502 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 LUZP1Q86V48 1076 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 EDC3Q96F86 508 aaKnown RBP12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 MPHOSPH8Q99549 860 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 STAP2Q9UGK3 403 aa12.25□□□□□ -0.45
CAPRIN1-201ENST00000341394 SERPINC1P01008 464 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 TPM3P06753 285 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 PTGS1P23219 599 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.452e-7■■■□□ 15.7
CAPRIN1-201ENST00000341394 RNF216Q9NWF9 866 aaPredicted RBP12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 CASZ1Q86V15 1759 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 STX6O43752 255 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 PPARDQ03181 441 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 USPL1Q5W0Q7 1092 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 GOLGA6L1Q8N7Z2 621 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 ECHDC1Q9NTX5 307 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
CAPRIN1-201ENST00000341394 OFD1O75665 1012 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms