RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TTC41PQ6P2S7 1318 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CIB2O75838 187 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 ZWINTO95229 277 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 HLA-DOAP06340 250 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 ZBTB16Q05516 673 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 BICD1Q96G01 975 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 IBSPP21815 317 aaPredicted RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 KIF5AQ12840 1032 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 SMAP1Q8IYB5 467 aaPredicted RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 TMX3Q96JJ7 454 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 PUF60Q9UHX1 559 aaKnown RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 KRT13P13646 458 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 TRIM14Q14142 442 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 IFIT1BQ5T764 474 aaKnown RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 RRAGBQ5VZM2 374 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 VPS18Q9P253 973 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 CALML3P27482 149 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 INTS4Q96HW7 963 aaKnown RBP5.44□□□□□ -1.54
RC3H1-201ENST00000258349 PIK3C2GO75747 1445 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 ZBTB43O43298 467 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 F13A1P00488 732 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 UBXN1Q04323 297 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 POTEDQ86YR6 584 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 AOPEPQ8N6M6 819 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 ZMYND15Q9H091 742 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 STIM2Q9P246 746 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 ELP1O95163 1332 aa5.44□□□□□ -1.54
RC3H1-201ENST00000258349 NBPF7P0C2Y1 421 aaPredicted RBP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 GNAT2P19087 354 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 KRT2P35908 639 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 TRAF1Q13077 416 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 SETDB1Q15047 1291 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 GSTA5Q7RTV2 222 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 NEK11Q8NG66 645 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 RAB3IL1Q8TBN0 382 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 TEX13AQ9BXU3 409 aaPredicted RBP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 MTRF1LQ9UGC7 380 aaKnown RBP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 DNAI1Q9UI46 699 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 PARD3Q8TEW0 1356 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 MSANTD4Q8NCY6 345 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 TRERF1Q96PN7 1200 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CEP83Q9Y592 693 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 KDM5DQ9BY66 1539 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 ERCC6LQ2NKX8 1250 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 DNAJC21Q5F1R6 531 aaKnown RBP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 GBP6Q6ZN66 633 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC144CPQ8IYA2 1237 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 TRPM2O94759 1503 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 A0A1B0GUL7 405 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 GNAQP50148 359 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 SF3B2Q13435 895 aaKnown RBP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 LRRIQ1Q96JM4 1722 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 GDPD2Q9HCC8 539 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC160A6NGH7 325 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 TNNC1P63316 161 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 MAP7D1Q3KQU3 841 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC184Q52MB2 194 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 AFAP1L1Q8TED9 768 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 SDSP20132 328 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 MRPS9P82933 396 aaKnown RBP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 PPP1R42Q7Z4L9 355 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 MCMDC2Q4G0Z9 681 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 ESR2Q92731 530 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC114Q96M63 670 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 UHRF1BP1Q6BDS2 1440 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 PPIP5K1Q6PFW1 1433 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CPLX4Q7Z7G2 160 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 KIAA1524Q8TCG1 905 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 ATRIPQ8WXE1 791 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 ESYT1Q9BSJ8 1104 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 XRCC6P12956 609 aaKnown RBP eCLIP5.43□□□□□ -1.54
RC3H1-201ENST00000258349 MICALL1Q8N3F8 863 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 CCDC110Q8TBZ0 833 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 RASSF4Q9H2L5 321 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 ZSWIM4Q9H7M6 989 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 ODF2LQ9ULJ1 636 aa5.43□□□□□ -1.54
RC3H1-201ENST00000258349 NDC80O14777 642 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 SMC5Q8IY18 1101 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 ALG1Q9BT22 464 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TRIM7Q9C029 511 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 MBIPQ9NS73 344 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 HDAC9Q9UKV0 1011 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CEP57Q86XR8 500 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 STMN2Q93045 179 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 UTP14AQ9BVJ6 771 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TFIP11Q9UBB9 837 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 MKRN1Q9UHC7 482 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CLASP1Q7Z460 1538 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 WDHD1O75717 1129 aaPredicted RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CALM1P0DP23 149 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CALM2P0DP24 149 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CALM3P0DP25 149 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 ARFGAP2Q8N6H7 521 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 GPR161Q8N6U8 529 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 UTP11Q9Y3A2 253 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 COL17A1Q9UMD9 1497 aaPredicted RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 TCOF1Q13428 1488 aaKnown RBP5.42□□□□□ -1.54
RC3H1-201ENST00000258349 PLB1Q6P1J6 1458 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 CD109Q6YHK3 1445 aa5.42□□□□□ -1.54
RC3H1-201ENST00000258349 Q6ZUG5 572 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms