RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ubxn10Q8BG34 277 aa25.45■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Myh15E9Q264 1925 aa25.45■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Myh3P13541 1940 aa25.45■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Itgb4A2A863 1818 aa25.44■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Il17raQ60943 864 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Kdm4cQ8VCD7 1054 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Ciapin1Q8WTY4 309 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Osbpl5Q9ER64 874 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 EgfrQ01279 1210 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Nme8Q715T0 586 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 LlphQ9D945 130 aaKnown RBP25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 ParvgQ9ERD8 331 aa25.43■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Rbm8a2A0A0N4SUH6 174 aa25.42■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Dok7Q18PE0 504 aa25.42■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Mb21d2Q8C525 428 aa25.42■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 StrbpQ91WM1 672 aaKnown RBP25.42■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Rbm8aQ9CWZ3 174 aa25.42■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Ak2Q9WTP6 239 aa25.42■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Celf1P28659 486 aaKnown RBP25.41■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 AnlnQ8K298 1121 aaKnown RBP25.41■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Mrps5Q99N87 432 aaKnown RBP25.41■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Casp1P29452 402 aa25.4■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Map10Q8BJS7 891 aa25.4■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Pus3Q9JI38 481 aa25.4■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Myh4Q5SX39 1939 aa25.4■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 HlfQ8BW74 295 aa25.4■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Camkk2Q8C078 588 aa25.4■■□□□ 1.66
Ccdc88a-202ENSMUST00000109477 Terf2O35144 541 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Cyp2d10P24456 504 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Pcsk7Q61139 770 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Pdzph1Q8BGR1 1238 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 HdlbpQ8VDJ3 1268 aaKnown RBP25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Sh3bp5lQ99LH9 392 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 UvssaQ9D479 717 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Add2Q9QYB8 725 aa25.39■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Mre11Q61216 706 aa25.38■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 EvplQ9D952 2035 aa25.38■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Arfgef1G3X9K3 1846 aaKnown RBP25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Izumo3A6PWV3 263 aa25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Rhbdl3P58873 404 aa25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Stk11ipQ3TAA7 1072 aa25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Atp2b4Q6Q477 1205 aa25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Cyp27a1Q9DBG1 533 aa25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Mroh6V9GX81 722 aa25.37■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Rnf20Q5DTM8 973 aa25.36■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 WaslQ91YD9 501 aa25.36■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Appbp2Q9DAX9 585 aa25.36■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Irs4Q9Z0Y7 1216 aa25.36■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Mtcl1Q3UHU5 1945 aa25.36■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Nup188Q6ZQH8 1759 aa25.36■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 NfixP70257 488 aa25.35■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Slc14a2Q8R4T9 930 aa25.35■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Slfn1Q9Z0I7 337 aa25.35■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Zfp831A2ADM8 1628 aa25.35■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Pram1Q6BCL1 675 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Kcnn1Q9EQR3 537 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Phactr2B1AVP0 632 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Ugt1a5B2RT14 529 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Prl7d1P04769 244 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Slc7a3P70423 618 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Glg1Q61543 1175 aaKnown RBP25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Kank4Q6P9J5 1016 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Lmbrd2Q8C561 694 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Ltn1Q6A009 1767 aa25.34■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Hap1O35668 628 aa25.33■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 RubcnlQ3TD16 648 aa25.33■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Edrf1Q6GQV7 1239 aa25.33■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 AidaQ8C4Q6 305 aa25.33■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Hmg20bQ9Z104 317 aa25.33■■□□□ 1.65
Ccdc88a-202ENSMUST00000109477 Rbbp6P97868 1790 aaKnown RBP25.33■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Pdzrn3Q69ZS0 1063 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Lrrfip2Q91WK0 415 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Cyp2ab1S4R196 498 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Catsper2A2ARP9 588 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Smarce1O54941 411 aaKnown RBP25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Rfx1P48377 963 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Pla2g4fQ50L41 855 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Sgsm2Q80U12 1005 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Atf7Q8R0S1 413 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Cd248Q91V98 765 aa25.32■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Ankrd63A2ARS0 390 aa25.31■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Sept9Q80UG5 583 aa25.31■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 FliiQ9JJ28 1271 aa25.31■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Gjb2Q00977 226 aa25.3■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Ints3Q7TPD0 1041 aaKnown RBP25.3■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Ube3cQ80U95 1083 aa25.3■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Polr3dQ91WD1 398 aa25.3■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 A0A1W2P7S8 802 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Olfr247E9PVJ7 320 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Olfr819K7N727 320 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Klrk1O54709 232 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Hspd1P63038 573 aaKnown RBP25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Cdc5lQ6A068 802 aaKnown RBP25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 PrimpolQ6P1E7 537 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Trim56Q80VI1 734 aaKnown RBP25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Adam1bQ8R534 806 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Slx4ipQ9D7Y9 413 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Myh13B1AR69 1938 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 Kcnb2A6H8H5 907 aa25.29■■□□□ 1.64
Ccdc88a-202ENSMUST00000109477 EvcP57680 1005 aa25.29■■□□□ 1.64
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms