RNA–Protein interactions for RNA: ENSMUST00000109213.8

Trim7-202, Transcript of E3 ubiquitin-protein ligase TRIM7, mousemouse

TSL 1 (best) BASIC

Gene Trim7, Length 2,356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim7-202ENSMUST00000109213 Casc1Q6TDU8 730 aa18.92■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ripk4Q9ERK0 786 aa18.92■□□□□ 0.62
Trim7-202ENSMUST00000109213 Limch1Q3UH68 1057 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Rnf214Q8BFU3 668 aaKnown RBP18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ncaph2Q8BSP2 607 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Hap1O35668 628 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Tom1O88746 492 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Nom1Q3UFM5 854 aaKnown RBP18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Trim34aQ99PP6 485 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 4931408C20RikE9PWP9 1381 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Col3a1P08121 1464 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Cnnm3Q32NY4 713 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ano1Q8BHY3 960 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Pms1Q8K119 917 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Klc3Q91W40 508 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 SrrtQ99MR6 875 aaKnown RBP18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Plekho1Q9JIY0 408 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 TrdnE9Q9K5 693 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Spty2d1Q68FG3 682 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Rcan3Q9JKK0 239 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Setdb1O88974 1307 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Lama4P97927 1816 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ercc3P49135 783 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pald1P70261 859 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Plcd1Q8R3B1 756 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Emilin1Q99K41 1017 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Gm29094F6Q785 221 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pdia4P08003 638 aaKnown RBP18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Snrpa1P57784 255 aaKnown RBP18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 MthfsQ9D110 203 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zbtb22Q9Z0G7 638 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cfap44E9Q5M6 1843 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cyp2d9P11714 504 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Hand2Q61039 217 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pdcl2Q78Y63 240 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Srgap1Q91Z69 1062 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cacna1sQ02789 1880 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Dctn1O08788 1281 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Irf5P56477 497 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ifit1bl2Q3U687 466 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Abtb2Q7TQI7 1024 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zfp317Q8C0Q5 607 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Adam1bQ8R534 806 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rbm10Q99KG3 930 aaKnown RBP18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pcmtd1P59913 357 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cct2P80314 535 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zfp51Q3U4L8 781 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Nxf7Q80SZ6 620 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 SowahdQ8BY98 327 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Alx1Q8C8B0 326 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 ImmtQ8CAQ8 757 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rufy2Q8R4C2 606 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Trim59Q922Y2 403 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pes1Q9EQ61 584 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zscan25B2RX31 543 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Gm4340L7N2C4 268 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ttc14Q9CSP9 761 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Mrpl44Q9CY73 333 aaKnown RBP18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ndufa8Q9DCJ5 172 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Fam184aE9PW83 1143 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ubash3aQ3V3E1 624 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Nme8Q715T0 586 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Trip6Q9Z1Y4 480 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rps6ka4Q9Z2B9 773 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Spata31d1bE9QA57 1361 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pcdhb9E9Q5G2 828 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rgs9O54828 675 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 CgnP59242 1191 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Gse1Q3U3C9 1213 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 PdcQ9QW08 244 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Krt85Q9Z2T6 507 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Fsd1Q7TPM6 496 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Bsdc1Q80Y55 427 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 R3hcc1Q8BSI6 488 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Speer4dL7N216 212 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Snai1Q02085 264 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Kcnq3Q8K3F6 873 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Sept12Q9D451 317 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cyp2c23E9Q5K4 494 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Fez1Q8K0X8 392 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Chd1lQ9CXF7 900 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Mcm3P25206 812 aaKnown RBP18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rtkn2Q14B46 604 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Sf3b2Q3UJB0 878 aaKnown RBP18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 ErmnQ5EBJ4 281 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Kiaa0753Q6A000 959 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Erich6bQ9D4S6 220 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Nhsl1Q8CAF4 1587 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Mknk2Q8CDB0 459 aa18.83■□□□□ 0.6
Trim7-202ENSMUST00000109213 NgdnQ9DB96 315 aaKnown RBP18.83■□□□□ 0.6
Trim7-202ENSMUST00000109213 Vmn2r23E9PXI5 849 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Csrnp1P59054 583 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Tmem59lQ7TNI2 337 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Olfml1Q8BSH2 233 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Ush1cQ9ES64 910 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Wdr19Q3UGF1 1341 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Mapk8ip1Q9WVI9 707 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Mroh6V9GX81 722 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Wdr33Q8K4P0 1330 aaKnown RBP18.81■□□□□ 0.6
Trim7-202ENSMUST00000109213 Lnx1O70263 728 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms