RNA–Protein interactions for RNA: ENSMUST00000109213.8

Trim7-202, Transcript of E3 ubiquitin-protein ligase TRIM7, mousemouse

TSL 1 (best) BASIC

Gene Trim7, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim7-202ENSMUST00000109213 Casc1Q6TDU8 730 aa18.92■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ripk4Q9ERK0 786 aa18.92■□□□□ 0.62
Trim7-202ENSMUST00000109213 Limch1Q3UH68 1057 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Rnf214Q8BFU3 668 aaKnown RBP18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ncaph2Q8BSP2 607 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Hap1O35668 628 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Tom1O88746 492 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Nom1Q3UFM5 854 aaKnown RBP18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Trim34aQ99PP6 485 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 4931408C20RikE9PWP9 1381 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Col3a1P08121 1464 aa18.91■□□□□ 0.62
Trim7-202ENSMUST00000109213 Cnnm3Q32NY4 713 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ano1Q8BHY3 960 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Pms1Q8K119 917 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Klc3Q91W40 508 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 SrrtQ99MR6 875 aaKnown RBP18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Plekho1Q9JIY0 408 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 TrdnE9Q9K5 693 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Spty2d1Q68FG3 682 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Rcan3Q9JKK0 239 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Setdb1O88974 1307 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Lama4P97927 1816 aa18.9■□□□□ 0.62
Trim7-202ENSMUST00000109213 Ercc3P49135 783 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pald1P70261 859 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Plcd1Q8R3B1 756 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Emilin1Q99K41 1017 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Gm29094F6Q785 221 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pdia4P08003 638 aaKnown RBP18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Snrpa1P57784 255 aaKnown RBP18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 MthfsQ9D110 203 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zbtb22Q9Z0G7 638 aa18.89■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cfap44E9Q5M6 1843 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cyp2d9P11714 504 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Hand2Q61039 217 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pdcl2Q78Y63 240 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Srgap1Q91Z69 1062 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cacna1sQ02789 1880 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Dctn1O08788 1281 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Irf5P56477 497 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ifit1bl2Q3U687 466 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Abtb2Q7TQI7 1024 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zfp317Q8C0Q5 607 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Adam1bQ8R534 806 aa18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rbm10Q99KG3 930 aaKnown RBP18.88■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pcmtd1P59913 357 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cct2P80314 535 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zfp51Q3U4L8 781 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Nxf7Q80SZ6 620 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 SowahdQ8BY98 327 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Alx1Q8C8B0 326 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 ImmtQ8CAQ8 757 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rufy2Q8R4C2 606 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Trim59Q922Y2 403 aa18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pes1Q9EQ61 584 aaKnown RBP18.87■□□□□ 0.61
Trim7-202ENSMUST00000109213 Zscan25B2RX31 543 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Gm4340L7N2C4 268 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ttc14Q9CSP9 761 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Mrpl44Q9CY73 333 aaKnown RBP18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ndufa8Q9DCJ5 172 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Fam184aE9PW83 1143 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Ubash3aQ3V3E1 624 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Nme8Q715T0 586 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Trip6Q9Z1Y4 480 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rps6ka4Q9Z2B9 773 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Spata31d1bE9QA57 1361 aa18.86■□□□□ 0.61
Trim7-202ENSMUST00000109213 Pcdhb9E9Q5G2 828 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rgs9O54828 675 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 CgnP59242 1191 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Gse1Q3U3C9 1213 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 PdcQ9QW08 244 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Krt85Q9Z2T6 507 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Fsd1Q7TPM6 496 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Bsdc1Q80Y55 427 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 R3hcc1Q8BSI6 488 aa18.85■□□□□ 0.61
Trim7-202ENSMUST00000109213 Speer4dL7N216 212 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Snai1Q02085 264 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Kcnq3Q8K3F6 873 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Sept12Q9D451 317 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Cyp2c23E9Q5K4 494 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Fez1Q8K0X8 392 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Chd1lQ9CXF7 900 aa18.84■□□□□ 0.61
Trim7-202ENSMUST00000109213 Mcm3P25206 812 aaKnown RBP18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Rtkn2Q14B46 604 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Sf3b2Q3UJB0 878 aaKnown RBP18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 ErmnQ5EBJ4 281 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Kiaa0753Q6A000 959 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Erich6bQ9D4S6 220 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Nhsl1Q8CAF4 1587 aa18.83■□□□□ 0.61
Trim7-202ENSMUST00000109213 Mknk2Q8CDB0 459 aa18.83■□□□□ 0.6
Trim7-202ENSMUST00000109213 NgdnQ9DB96 315 aaKnown RBP18.83■□□□□ 0.6
Trim7-202ENSMUST00000109213 Vmn2r23E9PXI5 849 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Csrnp1P59054 583 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Tmem59lQ7TNI2 337 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Olfml1Q8BSH2 233 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Ush1cQ9ES64 910 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Wdr19Q3UGF1 1341 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Mapk8ip1Q9WVI9 707 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Mroh6V9GX81 722 aa18.82■□□□□ 0.6
Trim7-202ENSMUST00000109213 Wdr33Q8K4P0 1330 aaKnown RBP18.81■□□□□ 0.6
Trim7-202ENSMUST00000109213 Lnx1O70263 728 aa18.81■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms