RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 InhbbQ04999 411 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pgr15lQ80T54 456 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm13199Q8C8E0 125 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1466Q8VFW4 310 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r43Q8VIC9 329 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Dkkl1Q9QZL9 230 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zfp160E9Q459 650 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zfp820E9Q5G8 549 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sstr5O08858 362 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sec61a1P61620 476 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gfod1Q3UHD2 390 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Abhd16bQ80YU0 474 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 FkrpQ8CG64 494 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ndufa9Q9DC69 377 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 ClcnkaQ9WUB7 687 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm45716A0A1B0GRQ0 93 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zfp345A2AQA1 561 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr110A2RT31 317 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P01675 107 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P01676 107 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P01677 107 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P01678 107 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Il1bP10749 269 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 CebpgP53568 150 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Doc2bP70169 412 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Anxa7Q07076 463 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr111Q7TRK1 317 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Prl8a9Q9CQ58 241 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Wdr5bQ9D7H2 328 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ceacam13Q9DAT7 263 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Six6Q9QZ28 246 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ascc3E9PZJ8 2198 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Trav6-7-dv9A0A075B639 125 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1218L7MU54 311 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pcp2P12660 120 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ptpn22P29352 802 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Rce1P57791 329 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Dcaf12Q8BGZ3 453 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sec22aQ8BH47 307 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr131Q8VGC8 314 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc7a13Q91WN3 478 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr116Q923Q6 321 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 CsprsQ99388 208 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tomm40lQ9CZR3 308 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 TapbpQ9R233 465 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ubl3Q9Z2M6 117 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tspoap1Q7TNF8 1846 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 4930522L14RikE9QAG4 666 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm21411J3KMS0 136 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r170K7N6W9 304 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 RrhO35214 337 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc12a3P59158 1002 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Eif4eP63073 217 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 4933415F23RikQ14BX6 153 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr201Q7TS38 308 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Txnl1Q8CDN6 289 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc35b4Q8CIA5 331 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Nt5dc2Q91X76 390 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zc3h8Q9JJ48 305 aaKnown RBP14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Syngr4Q9Z1L2 233 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 KcpQ3U492 1550 aa14.17□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Mamdc4A2AJA7 1228 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr373E9Q4J3 314 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Stc2O88452 296 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gabrb1P50571 474 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fam57bQ7TNV1 275 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr372Q7TRY2 314 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Map6Q7TSJ2 906 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Actbl2Q8BFZ3 376 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Letmd1Q924L1 360 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Med18Q9CZ82 208 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Smco4Q9JIS3 59 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sirpb1bA0A0A6YXN8 397 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1130A0A1L1SQT2 314 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1129A2AV41 314 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sirpb1cK7N6K7 397 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn2r60L7N2A1 853 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 P06335 190 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ccr1l1P51676 356 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm6760Q0ZNK3 87 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 SrmsQ62270 496 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1232Q8VEX7 311 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr308Q8VFP2 308 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 D17h6s53eQ9Z1R4 293 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm20683H3BKJ1 410 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Lancl1O89112 399 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Hmgn2P09602 90 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Epha5Q60629 876 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Cd47Q61735 303 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr60Q8VGL4 311 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Scamp2Q9ERN0 329 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ap4m1Q9JKC7 449 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Sbk2P0C5K1 362 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Thbs2Q03350 1172 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Dvl2Q60838 736 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr688Q6W049 321 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Prelid1Q8R107 217 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Rtl8bQ9D1F0 113 aa14.16□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tcrg-V7A0A0A6YYE8 116 aa14.15□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1089A0A1L1SRK6 311 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms