Protein–RNA interactions for Protein: K7N6K7

Sirpb1c, Signal-regulatory protein beta 1C, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1cK7N6K7 Gm25239-201ENSMUST00000174915 86 ntBASIC31.95■■■□□ 2.71
Sirpb1cK7N6K7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Sirpb1cK7N6K7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Sirpb1cK7N6K7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Sirpb1cK7N6K7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Sirpb1cK7N6K7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Sirpb1cK7N6K7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sirpb1cK7N6K7 Psd-208ENSMUST00000224556 2034 ntBASIC27.89■■■□□ 2.05
Sirpb1cK7N6K7 Gm15042-201ENSMUST00000120212 883 ntBASIC27.8■■■□□ 2.04
Sirpb1cK7N6K7 Gm24109-201ENSMUST00000175489 103 ntBASIC27.77■■■□□ 2.04
Sirpb1cK7N6K7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Sirpb1cK7N6K7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sirpb1cK7N6K7 Gm15045-201ENSMUST00000117359 883 ntBASIC27.07■■□□□ 1.92
Sirpb1cK7N6K7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Sirpb1cK7N6K7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sirpb1cK7N6K7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sirpb1cK7N6K7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sirpb1cK7N6K7 Gm23366-201ENSMUST00000175022 89 ntBASIC26.72■■□□□ 1.87
Sirpb1cK7N6K7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sirpb1cK7N6K7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sirpb1cK7N6K7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sirpb1cK7N6K7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sirpb1cK7N6K7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sirpb1cK7N6K7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sirpb1cK7N6K7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sirpb1cK7N6K7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sirpb1cK7N6K7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sirpb1cK7N6K7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.95■■□□□ 1.74
Sirpb1cK7N6K7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Sirpb1cK7N6K7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sirpb1cK7N6K7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.82■■□□□ 1.72
Sirpb1cK7N6K7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.74■■□□□ 1.71
Sirpb1cK7N6K7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.71■■□□□ 1.71
Sirpb1cK7N6K7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Sirpb1cK7N6K7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sirpb1cK7N6K7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sirpb1cK7N6K7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sirpb1cK7N6K7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sirpb1cK7N6K7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sirpb1cK7N6K7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sirpb1cK7N6K7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sirpb1cK7N6K7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sirpb1cK7N6K7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.34■■□□□ 1.65
Sirpb1cK7N6K7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sirpb1cK7N6K7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.33■■□□□ 1.65
Sirpb1cK7N6K7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sirpb1cK7N6K7 Gm25238-201ENSMUST00000174914 89 ntBASIC25.23■■□□□ 1.63
Sirpb1cK7N6K7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sirpb1cK7N6K7 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.18■■□□□ 1.62
Sirpb1cK7N6K7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Sirpb1cK7N6K7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sirpb1cK7N6K7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sirpb1cK7N6K7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.09■■□□□ 1.61
Sirpb1cK7N6K7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sirpb1cK7N6K7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sirpb1cK7N6K7 Gm10524-201ENSMUST00000181931 1893 ntBASIC25■■□□□ 1.59
Sirpb1cK7N6K7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.97■■□□□ 1.59
Sirpb1cK7N6K7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sirpb1cK7N6K7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sirpb1cK7N6K7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.94■■□□□ 1.58
Sirpb1cK7N6K7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sirpb1cK7N6K7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Sirpb1cK7N6K7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Sirpb1cK7N6K7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sirpb1cK7N6K7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
Sirpb1cK7N6K7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Sirpb1cK7N6K7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Sirpb1cK7N6K7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Sirpb1cK7N6K7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Sirpb1cK7N6K7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.58■■□□□ 1.52
Sirpb1cK7N6K7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.57■■□□□ 1.52
Sirpb1cK7N6K7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sirpb1cK7N6K7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Sirpb1cK7N6K7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Sirpb1cK7N6K7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.47■■□□□ 1.51
Sirpb1cK7N6K7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sirpb1cK7N6K7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sirpb1cK7N6K7 Gm25262-201ENSMUST00000174934 133 ntBASIC24.34■■□□□ 1.49
Sirpb1cK7N6K7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sirpb1cK7N6K7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.32■■□□□ 1.48
Sirpb1cK7N6K7 Gm27325-201ENSMUST00000175467 74 ntBASIC24.29■■□□□ 1.48
Sirpb1cK7N6K7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Sirpb1cK7N6K7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sirpb1cK7N6K7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Sirpb1cK7N6K7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sirpb1cK7N6K7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sirpb1cK7N6K7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sirpb1cK7N6K7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sirpb1cK7N6K7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sirpb1cK7N6K7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sirpb1cK7N6K7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Sirpb1cK7N6K7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Sirpb1cK7N6K7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.06■■□□□ 1.44
Sirpb1cK7N6K7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sirpb1cK7N6K7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sirpb1cK7N6K7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Sirpb1cK7N6K7 Rab21-202ENSMUST00000218831 843 ntBASIC24■■□□□ 1.43
Sirpb1cK7N6K7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.96■■□□□ 1.43
Sirpb1cK7N6K7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sirpb1cK7N6K7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms