Protein–RNA interactions for Protein: A0A0A6YYE8

Tcrg-V7, T cell receptor gamma, variable 7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V7A0A0A6YYE8 Gm25239-201ENSMUST00000174915 86 ntBASIC35.13■■■■□ 3.21
Tcrg-V7A0A0A6YYE8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Tcrg-V7A0A0A6YYE8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Tcrg-V7A0A0A6YYE8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Tcrg-V7A0A0A6YYE8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tcrg-V7A0A0A6YYE8 Gm15042-201ENSMUST00000120212 883 ntBASIC30.96■■■□□ 2.55
Tcrg-V7A0A0A6YYE8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Tcrg-V7A0A0A6YYE8 Gm15045-201ENSMUST00000117359 883 ntBASIC30.35■■■□□ 2.45
Tcrg-V7A0A0A6YYE8 Gm24109-201ENSMUST00000175489 103 ntBASIC30.32■■■□□ 2.44
Tcrg-V7A0A0A6YYE8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Tcrg-V7A0A0A6YYE8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Tcrg-V7A0A0A6YYE8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Tcrg-V7A0A0A6YYE8 Psd-208ENSMUST00000224556 2034 ntBASIC29.37■■■□□ 2.29
Tcrg-V7A0A0A6YYE8 Gm23366-201ENSMUST00000175022 89 ntBASIC29.35■■■□□ 2.29
Tcrg-V7A0A0A6YYE8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Tcrg-V7A0A0A6YYE8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.32■■■□□ 2.28
Tcrg-V7A0A0A6YYE8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tcrg-V7A0A0A6YYE8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Tcrg-V7A0A0A6YYE8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tcrg-V7A0A0A6YYE8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Tcrg-V7A0A0A6YYE8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tcrg-V7A0A0A6YYE8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tcrg-V7A0A0A6YYE8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tcrg-V7A0A0A6YYE8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
Tcrg-V7A0A0A6YYE8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Tcrg-V7A0A0A6YYE8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tcrg-V7A0A0A6YYE8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.61■■■□□ 2.17
Tcrg-V7A0A0A6YYE8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Tcrg-V7A0A0A6YYE8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.45■■■□□ 2.14
Tcrg-V7A0A0A6YYE8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tcrg-V7A0A0A6YYE8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tcrg-V7A0A0A6YYE8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.2■■■□□ 2.11
Tcrg-V7A0A0A6YYE8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tcrg-V7A0A0A6YYE8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tcrg-V7A0A0A6YYE8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.06■■■□□ 2.08
Tcrg-V7A0A0A6YYE8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.78■■■□□ 2.04
Tcrg-V7A0A0A6YYE8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Tcrg-V7A0A0A6YYE8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Tcrg-V7A0A0A6YYE8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Tcrg-V7A0A0A6YYE8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Tcrg-V7A0A0A6YYE8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Tcrg-V7A0A0A6YYE8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Tcrg-V7A0A0A6YYE8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.66■■■□□ 2.02
Tcrg-V7A0A0A6YYE8 Gm25238-201ENSMUST00000174914 89 ntBASIC27.66■■■□□ 2.02
Tcrg-V7A0A0A6YYE8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Tcrg-V7A0A0A6YYE8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Tcrg-V7A0A0A6YYE8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.55■■■□□ 2
Tcrg-V7A0A0A6YYE8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Tcrg-V7A0A0A6YYE8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.47■■□□□ 1.99
Tcrg-V7A0A0A6YYE8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tcrg-V7A0A0A6YYE8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Tcrg-V7A0A0A6YYE8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Tcrg-V7A0A0A6YYE8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Tcrg-V7A0A0A6YYE8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tcrg-V7A0A0A6YYE8 Gm27325-201ENSMUST00000175467 74 ntBASIC27.2■■□□□ 1.94
Tcrg-V7A0A0A6YYE8 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.19■■□□□ 1.94
Tcrg-V7A0A0A6YYE8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Tcrg-V7A0A0A6YYE8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.15■■□□□ 1.94
Tcrg-V7A0A0A6YYE8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Tcrg-V7A0A0A6YYE8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
Tcrg-V7A0A0A6YYE8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Tcrg-V7A0A0A6YYE8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.01■■□□□ 1.91
Tcrg-V7A0A0A6YYE8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tcrg-V7A0A0A6YYE8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
Tcrg-V7A0A0A6YYE8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Tcrg-V7A0A0A6YYE8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Tcrg-V7A0A0A6YYE8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Tcrg-V7A0A0A6YYE8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.8■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.78■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.78■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Tcrg-V7A0A0A6YYE8 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.73■■□□□ 1.87
Tcrg-V7A0A0A6YYE8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tcrg-V7A0A0A6YYE8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Tcrg-V7A0A0A6YYE8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Tcrg-V7A0A0A6YYE8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Tcrg-V7A0A0A6YYE8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.53■■□□□ 1.84
Tcrg-V7A0A0A6YYE8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tcrg-V7A0A0A6YYE8 Rab21-202ENSMUST00000218831 843 ntBASIC26.49■■□□□ 1.83
Tcrg-V7A0A0A6YYE8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tcrg-V7A0A0A6YYE8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tcrg-V7A0A0A6YYE8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Tcrg-V7A0A0A6YYE8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.37■■□□□ 1.81
Tcrg-V7A0A0A6YYE8 Gm25262-201ENSMUST00000174934 133 ntBASIC26.3■■□□□ 1.8
Tcrg-V7A0A0A6YYE8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Tcrg-V7A0A0A6YYE8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tcrg-V7A0A0A6YYE8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.23■■□□□ 1.79
Tcrg-V7A0A0A6YYE8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tcrg-V7A0A0A6YYE8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tcrg-V7A0A0A6YYE8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Tcrg-V7A0A0A6YYE8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.18■■□□□ 1.78
Tcrg-V7A0A0A6YYE8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Tcrg-V7A0A0A6YYE8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.15■■□□□ 1.78
Tcrg-V7A0A0A6YYE8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tcrg-V7A0A0A6YYE8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tcrg-V7A0A0A6YYE8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms