Protein–RNA interactions for Protein: P09602

Hmgn2, Non-histone chromosomal protein HMG-17, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn2P09602 Gm25239-201ENSMUST00000174915 86 ntBASIC33.03■■■□□ 2.88
Hmgn2P09602 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Hmgn2P09602 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Hmgn2P09602 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Hmgn2P09602 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Hmgn2P09602 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Hmgn2P09602 Gm15042-201ENSMUST00000120212 883 ntBASIC29.36■■■□□ 2.29
Hmgn2P09602 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Hmgn2P09602 Psd-208ENSMUST00000224556 2034 ntBASIC28.81■■■□□ 2.2
Hmgn2P09602 Gm15045-201ENSMUST00000117359 883 ntBASIC28.78■■■□□ 2.2
Hmgn2P09602 Gm24109-201ENSMUST00000175489 103 ntBASIC28.39■■■□□ 2.14
Hmgn2P09602 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Hmgn2P09602 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Hmgn2P09602 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.28■■■□□ 2.12
Hmgn2P09602 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hmgn2P09602 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Hmgn2P09602 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Hmgn2P09602 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Hmgn2P09602 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Hmgn2P09602 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Hmgn2P09602 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Hmgn2P09602 Gm23366-201ENSMUST00000175022 89 ntBASIC27.67■■■□□ 2.02
Hmgn2P09602 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgn2P09602 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Hmgn2P09602 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Hmgn2P09602 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Hmgn2P09602 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.55■■■□□ 2
Hmgn2P09602 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.52■■■□□ 2
Hmgn2P09602 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Hmgn2P09602 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgn2P09602 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Hmgn2P09602 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Hmgn2P09602 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.24■■□□□ 1.95
Hmgn2P09602 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
Hmgn2P09602 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Hmgn2P09602 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27■■□□□ 1.91
Hmgn2P09602 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Hmgn2P09602 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.95■■□□□ 1.9
Hmgn2P09602 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Hmgn2P09602 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Hmgn2P09602 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.75■■□□□ 1.87
Hmgn2P09602 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Hmgn2P09602 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Hmgn2P09602 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.53■■□□□ 1.84
Hmgn2P09602 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.49■■□□□ 1.83
Hmgn2P09602 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Hmgn2P09602 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Hmgn2P09602 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Hmgn2P09602 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Hmgn2P09602 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.23■■□□□ 1.79
Hmgn2P09602 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Hmgn2P09602 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hmgn2P09602 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Hmgn2P09602 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Hmgn2P09602 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Hmgn2P09602 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Hmgn2P09602 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hmgn2P09602 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Hmgn2P09602 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hmgn2P09602 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.96■■□□□ 1.75
Hmgn2P09602 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Hmgn2P09602 Gm25238-201ENSMUST00000174914 89 ntBASIC25.9■■□□□ 1.74
Hmgn2P09602 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
Hmgn2P09602 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Hmgn2P09602 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Hmgn2P09602 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Hmgn2P09602 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.85■■□□□ 1.73
Hmgn2P09602 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.82■■□□□ 1.72
Hmgn2P09602 Gm27325-201ENSMUST00000175467 74 ntBASIC25.82■■□□□ 1.72
Hmgn2P09602 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.8■■□□□ 1.72
Hmgn2P09602 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Hmgn2P09602 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.7■■□□□ 1.7
Hmgn2P09602 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Hmgn2P09602 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.63■■□□□ 1.69
Hmgn2P09602 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hmgn2P09602 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hmgn2P09602 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hmgn2P09602 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hmgn2P09602 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
Hmgn2P09602 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgn2P09602 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Hmgn2P09602 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Hmgn2P09602 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Hmgn2P09602 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Hmgn2P09602 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Hmgn2P09602 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgn2P09602 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Hmgn2P09602 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hmgn2P09602 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.27■■□□□ 1.64
Hmgn2P09602 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.27■■□□□ 1.64
Hmgn2P09602 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Hmgn2P09602 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.22■■□□□ 1.63
Hmgn2P09602 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Hmgn2P09602 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgn2P09602 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgn2P09602 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Hmgn2P09602 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Hmgn2P09602 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Hmgn2P09602 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.09■■□□□ 1.61
Hmgn2P09602 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms