RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 COA3Q9Y2R0 106 aaPredicted RBP5.38□□□□□ -1.55
SDF2-205ENST00000587629 A0A087WUU8 490 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 ELOVL7A1L3X0 281 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 PRSS37A4D1T9 235 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 FAM220BPB1ANY3 271 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 HMGB1P1B2RPK0 211 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 F5H0A9 414 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 F5H5P2 479 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 SOCS2O14508 198 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 GSTA4O15217 222 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 SURF4O15260 269 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 HOXA3O43365 443 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 HLA-DPB1P04440 258 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 IFNW1P05000 195 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 RNASE1P07998 156 aaKnown RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 CD14P08571 375 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 COX5BP10606 129 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 RAC2P15153 192 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 MDKP21741 143 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 GNB2P62879 340 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 HOXA4Q00056 320 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 PAX8Q06710 450 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 AQP6Q13520 282 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 MEP1BQ16820 701 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 CCDC92Q53HC0 331 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 SLC27A4Q6P1M0 643 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 CORO6Q6QEF8 472 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 LYPD2Q6UXB3 125 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 BTNL3Q6UXE8 466 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 BRD3OSQ6XYD6 125 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 MBOAT2Q6ZWT7 520 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 FKBP9P1Q75LS8 142 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 RRM2BQ7LG56 351 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 MOGAT3Q86VF5 341 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 KLBQ86Z14 1044 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 GLB1L2Q8IW92 636 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 OFCC1Q8IZS5 231 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 MUC20Q8N307 709 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 POU5F2Q8N7G0 328 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 BOLLQ8N9W6 283 aaKnown RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 OR1F12Q8NHA8 337 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 STON2Q8WXE9 905 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 ACOT11Q8WXI4 607 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 TMIGD2Q96BF3 282 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 RCN3Q96D15 328 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 FAM46AQ96IP4 442 aaKnown RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 MEGF10Q96KG7 1140 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 ZNF582Q96NG8 517 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 TSSK2Q96PF2 358 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 TMEM246Q9BRR3 403 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 SSBP3Q9BWW4 388 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 NUAK2Q9H093 628 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 SYT4Q9H2B2 425 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 TMEM165Q9HC07 324 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 SAR1AQ9NR31 198 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 FGFR1OP2Q9NVK5 253 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 GID8Q9NWU2 228 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 CMTM6Q9NX76 183 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 ARMCX1Q9P291 453 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 POLR1DQ9Y2S0 133 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 POLR3KQ9Y2Y1 108 aaPredicted RBP5.37□□□□□ -1.55
SDF2-205ENST00000587629 TRRAPQ9Y4A5 3859 aa5.37□□□□□ -1.55
SDF2-205ENST00000587629 TRAV40A0A0B4J280 105 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 IGHV2-70DA0A0C4DH43 119 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 HTR3EA5X5Y0 456 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 OR6C6A6NF89 314 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 LRRC30A6NM36 301 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 BBIP1A8MTZ0 92 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 A8MXK9 166 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 CXCR6O00574 342 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 MLNRO43193 412 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 KHDRBS3O75525 346 aaKnown RBP5.36□□□□□ -1.55
SDF2-205ENST00000587629 SERPINA1P01009 418 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 NPPAP01160 153 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 TROVE2P10155 538 aaKnown RBP eCLIP5.36□□□□□ -1.55
SDF2-205ENST00000587629 NCK1P16333 377 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 TUBG1P23258 451 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 PMELP40967 661 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 MTNR1AP48039 350 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 SRP9P49458 86 aaKnown RBP5.36□□□□□ -1.55
SDF2-205ENST00000587629 FGF12P61328 243 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 IL13RA1P78552 427 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 PAX2Q02962 417 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 LIPEQ05469 1076 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 KRR1Q13601 381 aaKnown RBP5.36□□□□□ -1.55
SDF2-205ENST00000587629 MAPRE2Q15555 327 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 TUSC1Q2TAM9 212 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 DEFB112Q30KQ8 113 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 MIDNQ504T8 468 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 IFI44LQ53G44 452 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 PDLIM3Q53GG5 364 aaPredicted RBP5.36□□□□□ -1.55
SDF2-205ENST00000587629 COQ5Q5HYK3 327 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 FGD3Q5JSP0 725 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 RUSC1-AS1Q66K80 236 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 C16orf87Q6PH81 154 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 LRRN1Q6UXK5 716 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 PTCHD4Q6ZW05 846 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 TMPRSS11FQ6ZWK6 438 aa5.36□□□□□ -1.55
SDF2-205ENST00000587629 FAM122BQ7Z309 247 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms