RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 UNKLQ9H9P5 680 aaKnown RBP11.6□□□□□ -0.55
CXCL12-202ENST00000374426 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
CXCL12-202ENST00000374426 A0A1W2PPL8 197 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 C12orf71A8MTZ7 269 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 FXYD1O00168 92 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 TNFRSF1AP19438 455 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 GSTM3P21266 225 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 KITLGP21583 273 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 MSR1P21757 451 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 FUT4P22083 530 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 GUCA1AP43080 201 aaPredicted RBP11.59□□□□□ -0.55
CXCL12-202ENST00000374426 CTXN1P60606 82 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 FHL1Q13642 323 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 ARL9Q6T311 187 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 SYT9Q86SS6 491 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 TAF15Q92804 592 aaKnown RBP eCLIP11.59□□□□□ -0.55
CXCL12-202ENST00000374426 BPIFA2Q96DR5 249 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 MRI1Q9BV20 369 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 EMC7Q9NPA0 242 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 POLE4Q9NR33 117 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 MAN2C1Q9NTJ4 1040 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 TBCCD1Q9NVR7 557 aa11.59□□□□□ -0.55
CXCL12-202ENST00000374426 NDRG4Q9ULP0 352 aaKnown RBP11.59□□□□□ -0.55
CXCL12-202ENST00000374426 H7C1C5 153 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 CLDN34H7C241 214 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 COX5BP10606 129 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 IFI30P13284 250 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 TNFSF4P23510 183 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 CD80P33681 288 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 ERFP50548 548 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 LCN6P62502 163 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 PAX2Q02962 417 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 PAX8Q06710 450 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 CYLC2Q14093 348 aaPredicted RBP11.58□□□□□ -0.56
CXCL12-202ENST00000374426 SLC9A3R2Q15599 337 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 PDLIM3Q53GG5 364 aaPredicted RBP11.58□□□□□ -0.56
CXCL12-202ENST00000374426 FAM205BPQ63HN1 556 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 MICU2Q8IYU8 434 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 NPEPL1Q8NDH3 523 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 ITLN1Q8WWA0 313 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 SLC25A28Q96A46 364 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 CMBLQ96DG6 245 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 ATP6V1G3Q96LB4 118 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 IL19Q9UHD0 177 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 A4GNTQ9UNA3 340 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 STARD10Q9Y365 291 aa11.58□□□□□ -0.56
CXCL12-202ENST00000374426 SOX21Q9Y651 276 aaPredicted RBP11.58□□□□□ -0.56
CXCL12-202ENST00000374426 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 HTR3EA5X5Y0 456 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 A6NIZ1 184 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 CEACAM18A8MTB9 384 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 TMEM178BH3BS89 294 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 TUBG1P23258 451 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 MDH2P40926 338 aaKnown RBP11.57□□□□□ -0.56
CXCL12-202ENST00000374426 HTR5AP47898 357 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 RAP1BP61224 184 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 RAP1AP62834 184 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 IL13RA1P78552 427 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 DEFA6Q01524 100 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 ST3GAL3Q11203 375 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 CYBRD1Q53TN4 286 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 ESCO2Q56NI9 601 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 TTMPQ5BVD1 217 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 LEG1Q6P5S2 330 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 OR8J3Q8NGG0 315 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 HAVCR1Q96D42 359 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 PRRC1Q96M27 445 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 ZNF583Q96ND8 569 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 OR2V2Q96R30 315 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 SH3GL1Q99961 368 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 ECSITQ9BQ95 431 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 MS4A7Q9GZW8 240 aaPredicted RBP11.57□□□□□ -0.56
CXCL12-202ENST00000374426 GCM1Q9NP62 436 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 TUBG2Q9NRH3 451 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 OR5V1Q9UGF6 321 aa11.57□□□□□ -0.56
CXCL12-202ENST00000374426 IGHV3OR16-10A0A075B7F0 116 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 SURF4O15260 269 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 SGCEO43556 437 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 DOK2O60496 412 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 IFNA14P01570 189 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 WNT2P09544 360 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 MMP16P51512 607 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 SCRN3Q0VDG4 424 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 LRRC23Q53EV4 343 aaPredicted RBP11.56□□□□□ -0.56
CXCL12-202ENST00000374426 ERICH5Q6P6B1 374 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 C9orf139Q6ZV77 190 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 VASH1Q7L8A9 365 aaPredicted RBP11.56□□□□□ -0.56
CXCL12-202ENST00000374426 OAFQ86UD1 273 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 JAZF1Q86VZ6 243 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 NRMQ8IXM6 262 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 PARP8Q8N3A8 854 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 C10orf82Q8WW14 230 aa11.56□□□□□ -0.56
CXCL12-202ENST00000374426 SLC7A6Q92536 515 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms