RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C KAP123P40069 1113 aaKnown RBP8.89□□□□□ -0.99
SRP54YPR088C INP51P40559 946 aaKnown RBP8.89□□□□□ -0.99
SRP54YPR088C SGM1P47166 707 aa8.89□□□□□ -0.99
SRP54YPR088C KAP114P53067 1004 aa8.89□□□□□ -0.99
SRP54YPR088C MAL13P53338 473 aa8.89□□□□□ -0.99
SRP54YPR088C YNL134CP53912 376 aaKnown RBP8.89□□□□□ -0.99
SRP54YPR088C CWC21Q03375 135 aaKnown RBP8.89□□□□□ -0.99
SRP54YPR088C PCD1Q12524 340 aa8.89□□□□□ -0.99
SRP54YPR088C ADE4P04046 510 aaKnown RBP8.88□□□□□ -0.99
SRP54YPR088C BCH2P36122 765 aa8.88□□□□□ -0.99
SRP54YPR088C DRE2P36152 348 aa8.88□□□□□ -0.99
SRP54YPR088C YHR054CP38780 354 aa8.88□□□□□ -0.99
SRP54YPR088C SMF1P38925 575 aa8.88□□□□□ -0.99
SRP54YPR088C SAH1P39954 449 aaKnown RBP8.88□□□□□ -0.99
SRP54YPR088C YER186CP40101 306 aa8.88□□□□□ -0.99
SRP54YPR088C PHO86P46956 311 aa8.88□□□□□ -0.99
SRP54YPR088C JJJ1P53863 590 aa8.88□□□□□ -0.99
SRP54YPR088C ALG11P53954 548 aaKnown RBP8.88□□□□□ -0.99
SRP54YPR088C NOP14Q99207 810 aaKnown RBP8.88□□□□□ -0.99
SRP54YPR088C LAA1P39526 2014 aa8.88□□□□□ -0.99
SRP54YPR088C FUB1P25659 250 aa8.87□□□□□ -0.99
SRP54YPR088C UBX7P38349 436 aa8.87□□□□□ -0.99
SRP54YPR088C GCV2P49095 1034 aa8.87□□□□□ -0.99
SRP54YPR088C YGR130CP53278 816 aa8.87□□□□□ -0.99
SRP54YPR088C YMR114CQ04471 368 aaKnown RBP8.87□□□□□ -0.99
SRP54YPR088C POB3Q04636 552 aaKnown RBP8.87□□□□□ -0.99
SRP54YPR088C OSH2Q12451 1283 aa8.87□□□□□ -0.99
SRP54YPR088C YDR524C-BQ3E6R4 66 aa8.87□□□□□ -0.99
SRP54YPR088C GAL10P04397 699 aa8.87□□□□□ -0.99
SRP54YPR088C ALT1P52893 592 aa8.87□□□□□ -0.99
SRP54YPR088C YGR111WP53265 400 aa8.87□□□□□ -0.99
SRP54YPR088C PUS1Q12211 544 aaKnown RBP8.87□□□□□ -0.99
SRP54YPR088C NOP58Q12499 511 aaKnown RBP8.87□□□□□ -0.99
SRP54YPR088C YER152CP10356 443 aa8.86□□□□□ -0.99
SRP54YPR088C GFA1P14742 717 aaKnown RBP8.86□□□□□ -0.99
SRP54YPR088C PAP1P29468 568 aaKnown RBP8.86□□□□□ -0.99
SRP54YPR088C RRN6P32786 894 aa8.86□□□□□ -0.99
SRP54YPR088C RRP1P35178 278 aaPredicted RBP8.86□□□□□ -0.99
SRP54YPR088C BYE1P36106 594 aa8.86□□□□□ -0.99
SRP54YPR088C RCK2P38623 610 aa8.86□□□□□ -0.99
SRP54YPR088C YHL026CP38740 315 aa8.86□□□□□ -0.99
SRP54YPR088C SPC72P39723 622 aa8.86□□□□□ -0.99
SRP54YPR088C YMR1P47147 688 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
SRP54YPR088C ALT2P52892 507 aa8.86□□□□□ -0.99
SRP54YPR088C DIG1Q03063 452 aaKnown RBP8.86□□□□□ -0.99
SRP54YPR088C YDR222WQ04925 415 aa8.86□□□□□ -0.99
SRP54YPR088C YLR455WQ06188 304 aa8.86□□□□□ -0.99
SRP54YPR088C HIS2P38635 335 aa8.85□□□□□ -0.99
SRP54YPR088C CWC22P53333 577 aaKnown RBP8.85□□□□□ -0.99
SRP54YPR088C ERV41Q04651 352 aa8.85□□□□□ -0.99
SRP54YPR088C CTF3Q12748 733 aa8.85□□□□□ -0.99
SRP54YPR088C SPT5P27692 1063 aaKnown RBP8.84□□□□□ -0.99
SRP54YPR088C POT1P27796 417 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
SRP54YPR088C EFB1P32471 206 aaKnown RBP8.84□□□□□ -0.99
SRP54YPR088C NCL1P38205 684 aaKnown RBP8.84□□□□□ -0.99
SRP54YPR088C TDA3P38758 523 aa8.84□□□□□ -0.99
SRP54YPR088C MAD1P40957 749 aa8.84□□□□□ -0.99
SRP54YPR088C ZAP1P47043 880 aa8.84□□□□□ -0.99
SRP54YPR088C SNU56Q03782 492 aaKnown RBP8.84□□□□□ -0.99
SRP54YPR088C CDD1Q06549 142 aa8.84□□□□□ -0.99
SRP54YPR088C ECM30Q06673 1274 aa8.84□□□□□ -0.99
SRP54YPR088C DNL4Q08387 944 aaPredicted RBP8.84□□□□□ -0.99
SRP54YPR088C YPR027CQ12079 277 aa8.84□□□□□ -0.99
SRP54YPR088C LDB19Q12502 818 aa8.84□□□□□ -0.99
SRP54YPR088C SDH2P21801 266 aa8.83□□□□□ -1
SRP54YPR088C VMA4P22203 233 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C RSA4P25382 515 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C CYS3P31373 394 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C YMC2P38087 329 aa8.83□□□□□ -1
SRP54YPR088C RRT2P38332 387 aa8.83□□□□□ -1
SRP54YPR088C PUS2P53167 370 aa8.83□□□□□ -1
SRP54YPR088C HOP2P53187 214 aa8.83□□□□□ -1
SRP54YPR088C NOP13P53883 403 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
SRP54YPR088C FMP30Q02883 468 aa8.83□□□□□ -1
SRP54YPR088C ATG16Q03818 150 aa8.83□□□□□ -1
SRP54YPR088C RRB1Q04225 511 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
SRP54YPR088C YOR022CQ12204 715 aa8.83□□□□□ -1
SRP54YPR088C YLR462WO13556 202 aa8.83□□□□□ -1
SRP54YPR088C BI2P03873 423 aa8.83□□□□□ -1
SRP54YPR088C BI4P03879 638 aa8.83□□□□□ -1
SRP54YPR088C CHS1P08004 1131 aa8.83□□□□□ -1
SRP54YPR088C TIF1P10081 395 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C CNS1P33313 385 aa8.83□□□□□ -1
SRP54YPR088C NOP4P37838 685 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C YHL049CP38722 271 aa8.83□□□□□ -1
SRP54YPR088C YEL075CP39972 122 aa8.83□□□□□ -1
SRP54YPR088C LCP5P40079 357 aaPredicted RBP8.83□□□□□ -1
SRP54YPR088C YER189WP40104 122 aa8.83□□□□□ -1
SRP54YPR088C YFL064CP43540 174 aa8.83□□□□□ -1
SRP54YPR088C BRO1P48582 844 aa8.83□□□□□ -1
SRP54YPR088C PRP31P49704 494 aaPredicted RBP8.83□□□□□ -1
SRP54YPR088C YGL036WP53185 909 aaPredicted RBP8.83□□□□□ -1
SRP54YPR088C GPD1Q00055 391 aaKnown RBP8.83□□□□□ -1
SRP54YPR088C YPL034WQ03083 165 aa8.83□□□□□ -1
SRP54YPR088C ATG23Q06671 453 aa8.83□□□□□ -1
SRP54YPR088C ZRT2Q12436 422 aa8.83□□□□□ -1
SRP54YPR088C YBL111CQ3E7Y5 667 aa8.83□□□□□ -1
SRP54YPR088C BI3Q9ZZW7 517 aa8.83□□□□□ -1
SRP54YPR088C DBF4P32325 704 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms