RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	MTR3	P48240	250 aa	Predicted RBP	4.91	□□□□□ -1.62
SME1	YOR159C	HSV2	P50079	448 aa	Predicted RBP	4.91	□□□□□ -1.62
SME1	YOR159C	AMA1	P50082	593 aa		4.91	□□□□□ -1.62
SME1	YOR159C	ZIP2	P53061	704 aa		4.91	□□□□□ -1.62
SME1	YOR159C	SUT2	Q12286	268 aa		4.91	□□□□□ -1.62
SME1	YOR159C	YTA7	P40340	1379 aa		4.91	□□□□□ -1.62
SME1	YOR159C	DIF1	O13577	133 aa		4.9	□□□□□ -1.63
SME1	YOR159C	HIS7	P33734	552 aa	Known RBP	4.9	□□□□□ -1.63
SME1	YOR159C	HOS4	P40480	1083 aa		4.9	□□□□□ -1.63
SME1	YOR159C	LGE1	Q02796	332 aa	Known RBP	4.9	□□□□□ -1.63
SME1	YOR159C	YLR125W	Q12138	136 aa		4.9	□□□□□ -1.63
SME1	YOR159C	PHO8	P11491	566 aa		4.89	□□□□□ -1.63
SME1	YOR159C	LAT1	P12695	482 aa	Known RBP	4.89	□□□□□ -1.63
SME1	YOR159C	BCD1	P38772	366 aa		4.89	□□□□□ -1.63
SME1	YOR159C	GDH3	P39708	457 aa		4.89	□□□□□ -1.63
SME1	YOR159C	ATF1	P40353	525 aa		4.89	□□□□□ -1.63
SME1	YOR159C	BUD6	P41697	788 aa		4.89	□□□□□ -1.63
SME1	YOR159C	ALY2	P47029	1046 aa		4.89	□□□□□ -1.63
SME1	YOR159C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SME1	YOR159C	ZDS1	P50111	915 aa	Known RBP	4.88	□□□□□ -1.63
SME1	YOR159C	MAL11	P53048	616 aa		4.88	□□□□□ -1.63
SME1	YOR159C	TEX1	P53851	422 aa	Known RBP	4.88	□□□□□ -1.63
SME1	YOR159C	FPR4	Q06205	392 aa	Predicted RBP	4.88	□□□□□ -1.63
SME1	YOR159C	PEX2	P32800	271 aa		4.87	□□□□□ -1.63
SME1	YOR159C	TDP1	P38319	544 aa		4.87	□□□□□ -1.63
SME1	YOR159C	THI4	P32318	326 aa		4.86	□□□□□ -1.63
SME1	YOR159C	RIA1	P53893	1110 aa		4.86	□□□□□ -1.63
SME1	YOR159C	Q0142	Q9ZZW4	58 aa		4.86	□□□□□ -1.63
SME1	YOR159C	SSK2	P53599	1579 aa		4.86	□□□□□ -1.63
SME1	YOR159C	CIT2	P08679	460 aa		4.85	□□□□□ -1.63
SME1	YOR159C	GSY1	P23337	708 aa		4.85	□□□□□ -1.63
SME1	YOR159C	CBR1	P38626	284 aa	Known RBP	4.85	□□□□□ -1.63
SME1	YOR159C	DSS1	P39112	969 aa		4.85	□□□□□ -1.63
SME1	YOR159C	FMP52	P40008	231 aa		4.85	□□□□□ -1.63
SME1	YOR159C	UBC11	P52492	156 aa		4.85	□□□□□ -1.63
SME1	YOR159C	MMS1	Q06211	1407 aa		4.85	□□□□□ -1.63
SME1	YOR159C	ESC1	Q03661	1658 aa	Known RBP	4.85	□□□□□ -1.63
SME1	YOR159C	TAF2	P23255	1407 aa		4.84	□□□□□ -1.63
SME1	YOR159C	BNR1	P40450	1375 aa		4.84	□□□□□ -1.63
SME1	YOR159C	HIR1	P32479	840 aa		4.84	□□□□□ -1.63
SME1	YOR159C	MCD4	P36051	919 aa		4.84	□□□□□ -1.63
SME1	YOR159C	YBR259W	P38338	688 aa		4.84	□□□□□ -1.63
SME1	YOR159C	TEL2	P53038	688 aa		4.84	□□□□□ -1.63
SME1	YOR159C	GAD1	Q04792	585 aa		4.84	□□□□□ -1.63
SME1	YOR159C	RGC1	Q06108	1083 aa	Known RBP	4.84	□□□□□ -1.63
SME1	YOR159C	SGO1	Q08490	590 aa		4.84	□□□□□ -1.63
SME1	YOR159C	YLR149C	Q99296	730 aa		4.84	□□□□□ -1.63
SME1	YOR159C	RPO31	P04051	1460 aa		4.83	□□□□□ -1.64
SME1	YOR159C	MET6	P05694	767 aa	Known RBP	4.83	□□□□□ -1.64
SME1	YOR159C	KIN3	P22209	435 aa		4.83	□□□□□ -1.64
SME1	YOR159C	MTC2	P34246	357 aa		4.83	□□□□□ -1.64
SME1	YOR159C	CUE2	P36075	443 aa	Known RBP	4.83	□□□□□ -1.64
SME1	YOR159C	BAP3	P41815	604 aa		4.83	□□□□□ -1.64
SME1	YOR159C	PRP31	P49704	494 aa	Predicted RBP	4.83	□□□□□ -1.64
SME1	YOR159C	VPS73	P53142	486 aa	Known RBP	4.83	□□□□□ -1.64
SME1	YOR159C	MTL1	P53214	551 aa		4.83	□□□□□ -1.64
SME1	YOR159C	POB3	Q04636	552 aa	Known RBP	4.83	□□□□□ -1.64
SME1	YOR159C	MET5	P47169	1442 aa		4.82	□□□□□ -1.64
SME1	YOR159C	ADE2	P21264	571 aa	Known RBP	4.82	□□□□□ -1.64
SME1	YOR159C	PPG1	P32838	368 aa		4.82	□□□□□ -1.64
SME1	YOR159C	STO1	P34160	861 aa	Known RBP	4.82	□□□□□ -1.64
SME1	YOR159C	YHR112C	P38716	378 aa		4.82	□□□□□ -1.64
SME1	YOR159C	LYS9	P38999	446 aa		4.82	□□□□□ -1.64
SME1	YOR159C	TAH11	P47112	604 aa		4.82	□□□□□ -1.64
SME1	YOR159C	ATG11	Q12527	1178 aa		4.82	□□□□□ -1.64
SME1	YOR159C	MDM12	Q92328	271 aa		4.82	□□□□□ -1.64
SME1	YOR159C	YOR093C	Q12275	1648 aa		4.82	□□□□□ -1.64
SME1	YOR159C	ATG2	P53855	1592 aa		4.82	□□□□□ -1.64
SME1	YOR159C	CDC9	P04819	755 aa		4.81	□□□□□ -1.64
SME1	YOR159C	ERG6	P25087	383 aa	Known RBP	4.81	□□□□□ -1.64
SME1	YOR159C	VBA3	P25594	458 aa		4.81	□□□□□ -1.64
SME1	YOR159C	MSH2	P25847	964 aa		4.81	□□□□□ -1.64
SME1	YOR159C	PPZ2	P33329	710 aa		4.81	□□□□□ -1.64
SME1	YOR159C	FMO1	P38866	432 aa		4.81	□□□□□ -1.64
SME1	YOR159C	RPN10	P38886	268 aa	Known RBP	4.81	□□□□□ -1.64
SME1	YOR159C	YBP2	P53169	641 aa		4.81	□□□□□ -1.64
SME1	YOR159C	SSL2	Q00578	843 aa		4.81	□□□□□ -1.64
SME1	YOR159C	DNF2	Q12675	1612 aa		4.81	□□□□□ -1.64
SME1	YOR159C	GFA1	P14742	717 aa	Known RBP	4.8	□□□□□ -1.64
SME1	YOR159C	MIH1	P23748	554 aa		4.8	□□□□□ -1.64
SME1	YOR159C	MEF1	P25039	761 aa		4.8	□□□□□ -1.64
SME1	YOR159C	SFB3	P38810	929 aa		4.8	□□□□□ -1.64
SME1	YOR159C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
SME1	YOR159C	CCT7	P42943	550 aa	Known RBP	4.8	□□□□□ -1.64
SME1	YOR159C	YFL052W	P43551	465 aa		4.8	□□□□□ -1.64
SME1	YOR159C	PAN2	P53010	1115 aa	Predicted RBP	4.8	□□□□□ -1.64
SME1	YOR159C	UGO1	Q03327	502 aa		4.8	□□□□□ -1.64
SME1	YOR159C	GEA2	P39993	1459 aa	Known RBP	4.8	□□□□□ -1.64
SME1	YOR159C	CDC43	P18898	376 aa		4.79	□□□□□ -1.64
SME1	YOR159C	MVD1	P32377	396 aa	Known RBP	4.79	□□□□□ -1.64
SME1	YOR159C	PEX6	P33760	1030 aa		4.79	□□□□□ -1.64
SME1	YOR159C	CCT3	P39077	534 aa	Known RBP	4.79	□□□□□ -1.64
SME1	YOR159C	SMX3	P54999	86 aa	Predicted RBP	4.79	□□□□□ -1.64
SME1	YOR159C	YKR051W	P36142	418 aa		4.78	□□□□□ -1.64
SME1	YOR159C	FLO10	P36170	1169 aa		4.78	□□□□□ -1.64
SME1	YOR159C	RIX1	P38883	763 aa	Predicted RBP	4.78	□□□□□ -1.64
SME1	YOR159C	ECM1	P39715	212 aa		4.78	□□□□□ -1.64
SME1	YOR159C	CAF16	P43569	289 aa		4.78	□□□□□ -1.64
SME1	YOR159C	BNA2	P47125	453 aa		4.78	□□□□□ -1.64
SME1	YOR159C	NPY1	P53164	384 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms