RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	HAL9	Q12180	1030 aa		4.62	□□□□□ -1.67
TPM1	YNL079C	YBR182C-A	Q8TGU6	64 aa		4.62	□□□□□ -1.67
TPM1	YNL079C	SED4	P25365	1065 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	SFP1	P32432	683 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	STE14	P32584	239 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	SAP190	P36123	1033 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	CTF8	P38877	133 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	SDP1	P40479	209 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	RLP7	P40693	322 aa	Known RBP	4.61	□□□□□ -1.67
TPM1	YNL079C	ZDS1	P50111	915 aa	Known RBP	4.61	□□□□□ -1.67
TPM1	YNL079C	NCS6	P53088	359 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	PUS2	P53167	370 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	SNP1	Q00916	300 aa	Predicted RBP	4.61	□□□□□ -1.67
TPM1	YNL079C	YLR224W	Q05947	369 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	YLR001C	Q07895	862 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	YOR022C	Q12204	715 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	YGR161W-C	Q3E744	92 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	YOR093C	Q12275	1648 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	DOP1	Q03921	1698 aa		4.61	□□□□□ -1.67
TPM1	YNL079C	PRC1	P00729	532 aa		4.6	□□□□□ -1.67
TPM1	YNL079C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
TPM1	YNL079C	PCL2	P25693	308 aa		4.6	□□□□□ -1.67
TPM1	YNL079C	SET5	P38890	526 aa	Known RBP	4.6	□□□□□ -1.67
TPM1	YNL079C	PLB1	P39105	664 aa		4.6	□□□□□ -1.67
TPM1	YNL079C	ALY2	P47029	1046 aa		4.6	□□□□□ -1.67
TPM1	YNL079C	DUS1	P53759	423 aa	Known RBP	4.6	□□□□□ -1.67
TPM1	YNL079C	THI21	Q08975	551 aa		4.6	□□□□□ -1.67
TPM1	YNL079C	ADR1	P07248	1323 aa		4.6	□□□□□ -1.67
TPM1	YNL079C	PDR5	P33302	1511 aa	Known RBP	4.6	□□□□□ -1.67
TPM1	YNL079C	DIF1	O13577	133 aa		4.59	□□□□□ -1.67
TPM1	YNL079C	RAD18	P10862	487 aa		4.59	□□□□□ -1.67
TPM1	YNL079C	CHC1	P22137	1653 aa	Known RBP	4.59	□□□□□ -1.67
TPM1	YNL079C	YEL1	P34225	687 aa		4.59	□□□□□ -1.67
TPM1	YNL079C	SHR5	P41912	237 aa		4.59	□□□□□ -1.67
TPM1	YNL079C	NPC2	Q12408	173 aa		4.59	□□□□□ -1.67
TPM1	YNL079C	KCS1	Q12494	1050 aa		4.59	□□□□□ -1.67
TPM1	YNL079C	SEC7	P11075	2009 aa	Known RBP	4.58	□□□□□ -1.68
TPM1	YNL079C	YLR358C	O13565	187 aa		4.58	□□□□□ -1.68
TPM1	YNL079C	HOG1	P32485	435 aa		4.58	□□□□□ -1.68
TPM1	YNL079C	LST4	P34239	828 aa		4.58	□□□□□ -1.68
TPM1	YNL079C	PAF1	P38351	445 aa		4.58	□□□□□ -1.68
TPM1	YNL079C	YHR078W	P38799	552 aa		4.58	□□□□□ -1.68
TPM1	YNL079C	RPN10	P38886	268 aa	Known RBP	4.58	□□□□□ -1.68
TPM1	YNL079C	YDR338C	Q05497	695 aa		4.58	□□□□□ -1.68
TPM1	YNL079C	SFL1	P20134	766 aa		4.57	□□□□□ -1.68
TPM1	YNL079C	UBP5	P39944	805 aa		4.57	□□□□□ -1.68
TPM1	YNL079C	SSY5	P47002	699 aa		4.57	□□□□□ -1.68
TPM1	YNL079C	ZIP2	P53061	704 aa		4.57	□□□□□ -1.68
TPM1	YNL079C	YNR029C	P53729	429 aa	Known RBP	4.57	□□□□□ -1.68
TPM1	YNL079C	COG8	Q04632	607 aa		4.57	□□□□□ -1.68
TPM1	YNL079C	MIH1	P23748	554 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	SEC21	P32074	935 aa	Known RBP	4.56	□□□□□ -1.68
TPM1	YNL079C	PCM1	P38628	557 aa	Known RBP	4.56	□□□□□ -1.68
TPM1	YNL079C	CRP1	P38845	465 aa	Known RBP	4.56	□□□□□ -1.68
TPM1	YNL079C	HLJ1	P48353	224 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	MET13	P53128	600 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	NHX1	Q04121	633 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	CRR1	Q05790	422 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	ATG33	Q06485	197 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	VMR1	P38735	1592 aa		4.56	□□□□□ -1.68
TPM1	YNL079C	RAV1	P47104	1357 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	NUP188	P52593	1655 aa	Known RBP	4.55	□□□□□ -1.68
TPM1	YNL079C	BNI1	P41832	1953 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	STE11	P23561	717 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	MSS4	P38994	779 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	MGS1	P40151	587 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	IRC24	P40580	263 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	SDA1	P53313	767 aa	Known RBP	4.55	□□□□□ -1.68
TPM1	YNL079C	SLU7	Q02775	382 aa	Known RBP	4.55	□□□□□ -1.68
TPM1	YNL079C	CLU1	Q03690	1277 aa	Known RBP	4.55	□□□□□ -1.68
TPM1	YNL079C	TMA10	Q06177	86 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	GUP2	Q08929	609 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	GIN4	Q12263	1142 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	PDR11	P40550	1411 aa		4.55	□□□□□ -1.68
TPM1	YNL079C	IML1	P47170	1584 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	TUB3	P09734	445 aa	Known RBP	4.54	□□□□□ -1.68
TPM1	YNL079C	KAR4	P25583	335 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	HSL7	P38274	827 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	SAK1	P38990	1142 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	PZF1	P39933	429 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	BNA2	P47125	453 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	MNN10	P50108	393 aa	Known RBP	4.54	□□□□□ -1.68
TPM1	YNL079C	EXG2	P52911	562 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	MCM6	P53091	1017 aa	Known RBP	4.54	□□□□□ -1.68
TPM1	YNL079C	AIM14	P53109	570 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	YGL081W	P53156	320 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	MUS81	Q04149	632 aa	Predicted RBP	4.54	□□□□□ -1.68
TPM1	YNL079C	THI73	Q07904	523 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	SWM1	Q12379	170 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	DNF2	Q12675	1612 aa		4.54	□□□□□ -1.68
TPM1	YNL079C	RTC1	Q08281	1341 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	HMG1	P12683	1054 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	PRP4	P20053	465 aa	Known RBP	4.53	□□□□□ -1.68
TPM1	YNL079C	FLR1	P38124	548 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	VHR1	P40522	640 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	YFL052W	P43551	465 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	NPY1	P53164	384 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	ASI2	P53895	289 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	PEX19	Q07418	342 aa		4.53	□□□□□ -1.68
TPM1	YNL079C	GPR1	Q12361	961 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms