RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	FRA1	Q07825	749 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	CDC53	Q12018	815 aa	Known RBP	5.12	□□□□□ -1.59
ATM1	YMR301C	PCK1	P10963	549 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	PDE1	P22434	369 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	VAN1	P23642	535 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	CYS3	P31373	394 aa	Known RBP	5.12	□□□□□ -1.59
ATM1	YMR301C	COY1	P34237	679 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	RRP14	P36080	434 aa	Known RBP	5.12	□□□□□ -1.59
ATM1	YMR301C	BOL3	P39724	118 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	ACS2	P52910	683 aa	Known RBP	5.12	□□□□□ -1.59
ATM1	YMR301C	SHE10	P53075	577 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	YGR130C	P53278	816 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	STP1	Q00947	519 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	UTP14	Q04500	899 aa	Known RBP	5.12	□□□□□ -1.59
ATM1	YMR301C	HCR1	Q05775	265 aa	Known RBP	5.12	□□□□□ -1.59
ATM1	YMR301C	CDD1	Q06549	142 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	TSC13	Q99190	310 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	TRS33	Q99394	268 aa		5.12	□□□□□ -1.59
ATM1	YMR301C	PHO8	P11491	566 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	YBR284W	P38150	797 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	YFL034W	P43564	1073 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	NBP1	P52919	319 aa	Predicted RBP	5.11	□□□□□ -1.59
ATM1	YMR301C	ROM1	P53046	1155 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	SUB1	P54000	292 aa	Known RBP	5.11	□□□□□ -1.59
ATM1	YMR301C	SEC5	P89102	971 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	YDR344C	Q05510	147 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	YDL206W	Q12424	762 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	CTF3	Q12748	733 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	ASP3-2	P0CX77	362 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	ASP3-3	P0CX78	362 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	ASP3-4	P0CX79	362 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	ASP3-1	P0CZ17	362 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	VPH1	P32563	840 aa	Known RBP	5.11	□□□□□ -1.59
ATM1	YMR301C	PPG1	P32838	368 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	EAP1	P36041	632 aa	Known RBP	5.11	□□□□□ -1.59
ATM1	YMR301C	SOH1	P38633	127 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	UBP5	P39944	805 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	SIP5	P40210	489 aa	Known RBP	5.11	□□□□□ -1.59
ATM1	YMR301C	PEX14	P53112	341 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	RNH70	P53331	553 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	BIO5	P53744	561 aa	Known RBP	5.11	□□□□□ -1.59
ATM1	YMR301C	ADA2	Q02336	434 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	SDH5	Q08230	162 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	ISU2	Q12056	156 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	APM4	Q99186	491 aa		5.11	□□□□□ -1.59
ATM1	YMR301C	GAL80	P04387	435 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	HMG2	P12684	1045 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	RAM1	P22007	431 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	CDC15	P27636	974 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	TRK2	P28584	889 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	BMH1	P29311	267 aa	Known RBP	5.1	□□□□□ -1.59
ATM1	YMR301C	YHR054C	P38780	354 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	VTC2	P43585	828 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	POL31	P46957	487 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	CCM1	P48237	864 aa	Predicted RBP	5.1	□□□□□ -1.59
ATM1	YMR301C	HSH155	P49955	971 aa	Known RBP	5.1	□□□□□ -1.59
ATM1	YMR301C	CUE3	P53137	624 aa	Known RBP	5.1	□□□□□ -1.59
ATM1	YMR301C	SLG1	P54867	378 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	FMP25	Q08023	583 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	YPL216W	Q08964	1102 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	FAB1	P34756	2278 aa		5.1	□□□□□ -1.59
ATM1	YMR301C	SSB1	P11484	613 aa	Known RBP	5.09	□□□□□ -1.59
ATM1	YMR301C	NUD1	P32336	851 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	HIR1	P32479	840 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	MUD1	P32605	298 aa	Known RBP	5.09	□□□□□ -1.59
ATM1	YMR301C	ARP1	P38696	384 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	NPP2	P39997	493 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	SSB2	P40150	613 aa	Known RBP	5.09	□□□□□ -1.59
ATM1	YMR301C	MAD1	P40957	749 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	RPA14	P50106	137 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	KGD2	P19262	463 aa	Predicted RBP	5.09	□□□□□ -1.59
ATM1	YMR301C	VPS3	P23643	1011 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	PEP7	P32609	515 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	SIF2	P38262	535 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	HXT5	P38695	592 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	LCB2	P40970	561 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	TCO89	Q08921	799 aa		5.09	□□□□□ -1.59
ATM1	YMR301C	LEA1	Q08963	238 aa	Predicted RBP	5.09	□□□□□ -1.59
ATM1	YMR301C	BIK1	P11709	440 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	CLN2	P20438	545 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	PEX34	P25584	144 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	MRF1	P30775	413 aa	Predicted RBP	5.08	□□□□□ -1.6
ATM1	YMR301C	MET4	P32389	672 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
ATM1	YMR301C	FYV8	P46949	817 aa	Known RBP	5.08	□□□□□ -1.6
ATM1	YMR301C	LEE1	Q02799	301 aa	Known RBP	5.08	□□□□□ -1.6
ATM1	YMR301C	ALR1	Q08269	859 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	FRT1	Q99332	602 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	SLA2	P33338	968 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	AGP2	P38090	596 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	TBS1	P38114	1094 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	YJL049W	P47048	450 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	NSE5	Q03718	556 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	TLG2	Q08144	397 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	SGT2	Q12118	346 aa	Known RBP	5.08	□□□□□ -1.6
ATM1	YMR301C	HRT3	Q12347	344 aa		5.08	□□□□□ -1.6
ATM1	YMR301C	CAN1	P04817	590 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	IME1	P21190	360 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	SGF29	P25554	259 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	SWE1	P32944	819 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms