RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C NDC80P40460 691 aa3.29□□□□□ -1.88
VTI1YMR197C CCT7P42943 550 aaKnown RBP3.29□□□□□ -1.88
VTI1YMR197C ZDS1P50111 915 aaKnown RBP3.29□□□□□ -1.88
VTI1YMR197C YAP1802P53309 568 aa3.29□□□□□ -1.88
VTI1YMR197C ATP25Q03153 612 aa3.29□□□□□ -1.88
VTI1YMR197C HOF1Q05080 669 aa3.29□□□□□ -1.88
VTI1YMR197C AFT2Q08957 416 aa3.29□□□□□ -1.88
VTI1YMR197C FLC1Q08967 793 aa3.29□□□□□ -1.88
VTI1YMR197C TAF3Q12297 353 aa3.29□□□□□ -1.88
VTI1YMR197C SIR3P06701 978 aa3.28□□□□□ -1.88
VTI1YMR197C SPO11P23179 398 aa3.28□□□□□ -1.88
VTI1YMR197C SPC29P33419 253 aa3.28□□□□□ -1.88
VTI1YMR197C CCT3P39077 534 aaKnown RBP3.28□□□□□ -1.88
VTI1YMR197C ECM1P39715 212 aa3.28□□□□□ -1.88
VTI1YMR197C HXT16P47185 567 aa3.28□□□□□ -1.88
VTI1YMR197C PRP31P49704 494 aaPredicted RBP3.28□□□□□ -1.88
VTI1YMR197C RTA1P53047 317 aa3.28□□□□□ -1.88
VTI1YMR197C YBP2P53169 641 aa3.28□□□□□ -1.88
VTI1YMR197C THI7Q05998 598 aa3.28□□□□□ -1.88
VTI1YMR197C YKL033W-AQ86ZR7 236 aa3.28□□□□□ -1.88
VTI1YMR197C PYC1P11154 1178 aaKnown RBP3.27□□□□□ -1.89
VTI1YMR197C MVD1P32377 396 aaKnown RBP3.27□□□□□ -1.89
VTI1YMR197C EMP70P32802 667 aa3.27□□□□□ -1.89
VTI1YMR197C SFB3P38810 929 aa3.27□□□□□ -1.89
VTI1YMR197C ALY2P47029 1046 aa3.27□□□□□ -1.89
VTI1YMR197C PAN2P53010 1115 aaPredicted RBP3.27□□□□□ -1.89
VTI1YMR197C MTL1P53214 551 aa3.27□□□□□ -1.89
VTI1YMR197C APM1Q00776 475 aaPredicted RBP3.27□□□□□ -1.89
VTI1YMR197C CAN1P04817 590 aa3.26□□□□□ -1.89
VTI1YMR197C FMO1P38866 432 aa3.26□□□□□ -1.89
VTI1YMR197C TY4A-JP47023 414 aa3.26□□□□□ -1.89
VTI1YMR197C CTK1Q03957 528 aaKnown RBP3.26□□□□□ -1.89
VTI1YMR197C YDR338CQ05497 695 aa3.26□□□□□ -1.89
VTI1YMR197C ADE2P21264 571 aaKnown RBP3.25□□□□□ -1.89
VTI1YMR197C YHR112CP38716 378 aa3.25□□□□□ -1.89
VTI1YMR197C HRB1P38922 454 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
VTI1YMR197C LYS9P38999 446 aa3.25□□□□□ -1.89
VTI1YMR197C BDH2P39713 417 aa3.25□□□□□ -1.89
VTI1YMR197C RSP5P39940 809 aaKnown RBP3.25□□□□□ -1.89
VTI1YMR197C YEL020CP39994 560 aa3.25□□□□□ -1.89
VTI1YMR197C ARG2P40360 574 aa3.25□□□□□ -1.89
VTI1YMR197C CTR1P49573 406 aa3.25□□□□□ -1.89
VTI1YMR197C HUL5P53119 910 aa3.25□□□□□ -1.89
VTI1YMR197C RPN13O13563 156 aa3.24□□□□□ -1.89
VTI1YMR197C APL2P36000 726 aaPredicted RBP3.24□□□□□ -1.89
VTI1YMR197C GLG1P36143 616 aa3.24□□□□□ -1.89
VTI1YMR197C UBS1P38290 277 aa3.24□□□□□ -1.89
VTI1YMR197C NUP60P39705 539 aa3.24□□□□□ -1.89
VTI1YMR197C YJL049WP47048 450 aa3.24□□□□□ -1.89
VTI1YMR197C GAL11P19659 1081 aa3.23□□□□□ -1.89
VTI1YMR197C PHO11P35842 467 aa3.23□□□□□ -1.89
VTI1YMR197C TRZ1P36159 838 aaPredicted RBP3.23□□□□□ -1.89
VTI1YMR197C APT2P36973 181 aa3.23□□□□□ -1.89
VTI1YMR197C PHO12P38693 467 aa3.23□□□□□ -1.89
VTI1YMR197C UBC9P50623 157 aaPredicted RBP3.23□□□□□ -1.89
VTI1YMR197C FHN1P53279 174 aa3.23□□□□□ -1.89
VTI1YMR197C ORC4P54791 529 aa3.23□□□□□ -1.89
VTI1YMR197C ARG5,6Q01217 863 aa3.23□□□□□ -1.89
VTI1YMR197C RGC1Q06108 1083 aaKnown RBP3.23□□□□□ -1.89
VTI1YMR197C MRI1Q06489 411 aaKnown RBP3.23□□□□□ -1.89
VTI1YMR197C YAP7Q08182 245 aa3.23□□□□□ -1.89
VTI1YMR197C YFL052WP43551 465 aa3.22□□□□□ -1.89
VTI1YMR197C ATG4P53867 494 aa3.22□□□□□ -1.89
VTI1YMR197C MLH3Q12083 715 aa3.22□□□□□ -1.89
VTI1YMR197C ICT1Q12385 394 aa3.22□□□□□ -1.89
VTI1YMR197C YLR149CQ99296 730 aa3.22□□□□□ -1.89
VTI1YMR197C HRP1Q99383 534 aaKnown RBP3.22□□□□□ -1.89
VTI1YMR197C Q0142Q9ZZW4 58 aa3.22□□□□□ -1.89
VTI1YMR197C ERG6P25087 383 aaKnown RBP3.21□□□□□ -1.9
VTI1YMR197C CCR4P31384 837 aaKnown RBP3.21□□□□□ -1.9
VTI1YMR197C ORC2P32833 620 aa3.21□□□□□ -1.9
VTI1YMR197C BNA2P47125 453 aa3.21□□□□□ -1.9
VTI1YMR197C MCM21Q06675 368 aa3.21□□□□□ -1.9
VTI1YMR197C THR1P17423 357 aaKnown RBP3.2□□□□□ -1.9
VTI1YMR197C TMT1P32643 299 aa3.2□□□□□ -1.9
VTI1YMR197C MCD4P36051 919 aa3.2□□□□□ -1.9
VTI1YMR197C MIP6P38760 659 aaKnown RBP3.2□□□□□ -1.9
VTI1YMR197C GET2P40056 285 aa3.2□□□□□ -1.9
VTI1YMR197C ORC1P54784 914 aaPredicted RBP3.2□□□□□ -1.9
VTI1YMR197C USV1Q12132 391 aa3.2□□□□□ -1.9
VTI1YMR197C ZRT2Q12436 422 aa3.2□□□□□ -1.9
VTI1YMR197C HOM2P13663 365 aaKnown RBP3.19□□□□□ -1.9
VTI1YMR197C MTC2P34246 357 aa3.19□□□□□ -1.9
VTI1YMR197C GDH3P39708 457 aa3.19□□□□□ -1.9
VTI1YMR197C GLO1P50107 326 aa3.19□□□□□ -1.9
VTI1YMR197C NOP7P53261 605 aaKnown RBP3.19□□□□□ -1.9
VTI1YMR197C CDC53Q12018 815 aaKnown RBP3.19□□□□□ -1.9
VTI1YMR197C RNR1P21524 888 aaKnown RBP3.18□□□□□ -1.9
VTI1YMR197C VPS34P22543 875 aa3.18□□□□□ -1.9
VTI1YMR197C FUB1P25659 250 aa3.18□□□□□ -1.9
VTI1YMR197C SET3P36124 751 aa3.18□□□□□ -1.9
VTI1YMR197C MUP3P38734 546 aa3.18□□□□□ -1.9
VTI1YMR197C CRP1P38845 465 aaKnown RBP3.18□□□□□ -1.9
VTI1YMR197C RPN10P38886 268 aaKnown RBP3.18□□□□□ -1.9
VTI1YMR197C PAC2P39937 518 aa3.18□□□□□ -1.9
VTI1YMR197C MRK1P50873 501 aa3.18□□□□□ -1.9
VTI1YMR197C NPY1P53164 384 aa3.18□□□□□ -1.9
VTI1YMR197C SEC5P89102 971 aa3.18□□□□□ -1.9
VTI1YMR197C RIM13Q03792 727 aa3.18□□□□□ -1.9
VTI1YMR197C OSW1Q08692 278 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms