RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W GAD1Q04792 585 aa3.82□□□□□ -1.8
CTK3YML112W YLR149CQ99296 730 aa3.82□□□□□ -1.8
CTK3YML112W PHO8P11491 566 aa3.81□□□□□ -1.8
CTK3YML112W GSY1P23337 708 aa3.81□□□□□ -1.8
CTK3YML112W BCD1P38772 366 aa3.81□□□□□ -1.8
CTK3YML112W DSS1P39112 969 aa3.81□□□□□ -1.8
CTK3YML112W ECM1P39715 212 aa3.81□□□□□ -1.8
CTK3YML112W BAP3P41815 604 aa3.81□□□□□ -1.8
CTK3YML112W UBC11P52492 156 aa3.81□□□□□ -1.8
CTK3YML112W NPY1P53164 384 aa3.81□□□□□ -1.8
CTK3YML112W ORC4P54791 529 aa3.81□□□□□ -1.8
CTK3YML112W SNP1Q00916 300 aaPredicted RBP3.81□□□□□ -1.8
CTK3YML112W SGO1Q08490 590 aa3.81□□□□□ -1.8
CTK3YML112W MRH1Q12117 320 aaPredicted RBP3.81□□□□□ -1.8
CTK3YML112W YLR125WQ12138 136 aa3.81□□□□□ -1.8
CTK3YML112W Q0142Q9ZZW4 58 aa3.81□□□□□ -1.8
CTK3YML112W VBA3P25594 458 aa3.8□□□□□ -1.8
CTK3YML112W FMP52P40008 231 aa3.8□□□□□ -1.8
CTK3YML112W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
CTK3YML112W ADE2P21264 571 aaKnown RBP3.79□□□□□ -1.8
CTK3YML112W MSH2P25847 964 aa3.79□□□□□ -1.8
CTK3YML112W THI4P32318 326 aa3.79□□□□□ -1.8
CTK3YML112W CBR1P38626 284 aaKnown RBP3.79□□□□□ -1.8
CTK3YML112W YHR112CP38716 378 aa3.79□□□□□ -1.8
CTK3YML112W MIP6P38760 659 aaKnown RBP3.79□□□□□ -1.8
CTK3YML112W REV7P38927 245 aa3.79□□□□□ -1.8
CTK3YML112W MTL1P53214 551 aa3.79□□□□□ -1.8
CTK3YML112W SSL2Q00578 843 aa3.79□□□□□ -1.8
CTK3YML112W ARG5,6Q01217 863 aa3.79□□□□□ -1.8
CTK3YML112W CTK1Q03957 528 aaKnown RBP3.79□□□□□ -1.8
CTK3YML112W CIT2P08679 460 aa3.78□□□□□ -1.8
CTK3YML112W CDC43P18898 376 aa3.78□□□□□ -1.8
CTK3YML112W MEF1P25039 761 aa3.78□□□□□ -1.8
CTK3YML112W HIR1P32479 840 aa3.78□□□□□ -1.8
CTK3YML112W PEX6P33760 1030 aa3.78□□□□□ -1.8
CTK3YML112W APL2P36000 726 aaPredicted RBP3.78□□□□□ -1.8
CTK3YML112W TRZ1P36159 838 aaPredicted RBP3.78□□□□□ -1.8
CTK3YML112W HSL7P38274 827 aa3.78□□□□□ -1.8
CTK3YML112W TEL2P53038 688 aa3.78□□□□□ -1.8
CTK3YML112W NHX1Q04121 633 aa3.78□□□□□ -1.8
CTK3YML112W SRD1P09007 221 aa3.77□□□□□ -1.81
CTK3YML112W KIN3P22209 435 aa3.77□□□□□ -1.81
CTK3YML112W HOG1P32485 435 aa3.77□□□□□ -1.81
CTK3YML112W CCT3P39077 534 aaKnown RBP3.77□□□□□ -1.81
CTK3YML112W OSW7P43611 510 aa3.77□□□□□ -1.81
CTK3YML112W YAP1802P53309 568 aa3.77□□□□□ -1.81
CTK3YML112W UGO1Q03327 502 aa3.77□□□□□ -1.81
CTK3YML112W RPN7Q06103 429 aaKnown RBP3.77□□□□□ -1.81
CTK3YML112W SIR3P06701 978 aa3.76□□□□□ -1.81
CTK3YML112W GFA1P14742 717 aaKnown RBP3.76□□□□□ -1.81
CTK3YML112W MIH1P23748 554 aa3.76□□□□□ -1.81
CTK3YML112W ERG6P25087 383 aaKnown RBP3.76□□□□□ -1.81
CTK3YML112W YKR051WP36142 418 aa3.76□□□□□ -1.81
CTK3YML112W APT2P36973 181 aa3.76□□□□□ -1.81
CTK3YML112W TDP1P38319 544 aa3.76□□□□□ -1.81
CTK3YML112W LYS9P38999 446 aa3.76□□□□□ -1.81
CTK3YML112W NUP60P39705 539 aa3.76□□□□□ -1.81
CTK3YML112W VPS73P53142 486 aaKnown RBP3.76□□□□□ -1.81
CTK3YML112W MCM21Q06675 368 aa3.76□□□□□ -1.81
CTK3YML112W SUT2Q12286 268 aa3.76□□□□□ -1.81
CTK3YML112W YKL033W-AQ86ZR7 236 aa3.76□□□□□ -1.81
CTK3YML112W HRP1Q99383 534 aaKnown RBP3.76□□□□□ -1.81
CTK3YML112W RAD18P10862 487 aa3.75□□□□□ -1.81
CTK3YML112W MVD1P32377 396 aaKnown RBP3.75□□□□□ -1.81
CTK3YML112W YKR018CP36114 725 aa3.75□□□□□ -1.81
CTK3YML112W SFB3P38810 929 aa3.75□□□□□ -1.81
CTK3YML112W FMO1P38866 432 aa3.75□□□□□ -1.81
CTK3YML112W TAH11P47112 604 aa3.75□□□□□ -1.81
CTK3YML112W UBC9P50623 157 aaPredicted RBP3.75□□□□□ -1.81
CTK3YML112W PAN2P53010 1115 aaPredicted RBP3.75□□□□□ -1.81
CTK3YML112W SMX3P54999 86 aaPredicted RBP3.75□□□□□ -1.81
CTK3YML112W REC102Q02721 264 aa3.75□□□□□ -1.81
CTK3YML112W HCA4P20448 770 aaKnown RBP3.74□□□□□ -1.81
CTK3YML112W NDC80P40460 691 aa3.74□□□□□ -1.81
CTK3YML112W PCL10P53124 433 aa3.74□□□□□ -1.81
CTK3YML112W MET6P05694 767 aaKnown RBP3.73□□□□□ -1.81
CTK3YML112W PYC1P11154 1178 aaKnown RBP3.73□□□□□ -1.81
CTK3YML112W PCL2P25693 308 aa3.73□□□□□ -1.81
CTK3YML112W YEL1P34225 687 aa3.73□□□□□ -1.81
CTK3YML112W YJL206CP39529 758 aa3.73□□□□□ -1.81
CTK3YML112W DOT6P40059 670 aaKnown RBP3.73□□□□□ -1.81
CTK3YML112W ATF1P40353 525 aa3.73□□□□□ -1.81
CTK3YML112W SNM1P40993 198 aa3.73□□□□□ -1.81
CTK3YML112W CTR1P49573 406 aa3.73□□□□□ -1.81
CTK3YML112W AIM14P53109 570 aa3.73□□□□□ -1.81
CTK3YML112W COG8Q04632 607 aa3.73□□□□□ -1.81
CTK3YML112W POB3Q04636 552 aaKnown RBP3.73□□□□□ -1.81
CTK3YML112W RGC1Q06108 1083 aaKnown RBP3.73□□□□□ -1.81
CTK3YML112W ATG33Q06485 197 aa3.73□□□□□ -1.81
CTK3YML112W GIN4Q12263 1142 aa3.73□□□□□ -1.81
CTK3YML112W RNR1P21524 888 aaKnown RBP3.72□□□□□ -1.81
CTK3YML112W DMC1P25453 334 aa3.72□□□□□ -1.81
CTK3YML112W PPZ2P33329 710 aa3.72□□□□□ -1.81
CTK3YML112W PHO11P35842 467 aa3.72□□□□□ -1.81
CTK3YML112W MNN4P36044 1178 aa3.72□□□□□ -1.81
CTK3YML112W CUE2P36075 443 aaKnown RBP3.72□□□□□ -1.81
CTK3YML112W GLG1P36143 616 aa3.72□□□□□ -1.81
CTK3YML112W PHO12P38693 467 aa3.72□□□□□ -1.81
CTK3YML112W HRB1P38922 454 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
CTK3YML112W GET2P40056 285 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms