RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W SLD2P34252 453 aa4.47□□□□□ -1.69
SSL1YLR005W TSA1P34760 196 aaKnown RBP4.47□□□□□ -1.69
SSL1YLR005W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
SSL1YLR005W YHR131CP38835 850 aa4.47□□□□□ -1.69
SSL1YLR005W RPS26AP39938 119 aaKnown RBP4.47□□□□□ -1.69
SSL1YLR005W RPS26BP39939 119 aaKnown RBP4.47□□□□□ -1.69
SSL1YLR005W POL32P47110 350 aa4.47□□□□□ -1.69
SSL1YLR005W RPS15Q01855 142 aaKnown RBP4.47□□□□□ -1.69
SSL1YLR005W ECM16Q04217 1267 aaKnown RBP4.47□□□□□ -1.69
SSL1YLR005W TMA64Q04600 565 aaKnown RBP4.47□□□□□ -1.69
SSL1YLR005W YDL177CQ12257 170 aa4.47□□□□□ -1.69
SSL1YLR005W FKS1P38631 1876 aaKnown RBP4.46□□□□□ -1.69
SSL1YLR005W SEC23P15303 768 aaKnown RBP4.46□□□□□ -1.7
SSL1YLR005W POL3P15436 1097 aa4.46□□□□□ -1.7
SSL1YLR005W RIT1P23796 513 aa4.46□□□□□ -1.7
SSL1YLR005W RPL8BP29453 256 aaKnown RBP4.46□□□□□ -1.7
SSL1YLR005W MYO3P36006 1272 aa4.46□□□□□ -1.7
SSL1YLR005W DBP7P36120 742 aaKnown RBP4.46□□□□□ -1.7
SSL1YLR005W REG2P38232 338 aa4.46□□□□□ -1.7
SSL1YLR005W MRPS18P42847 217 aa4.46□□□□□ -1.7
SSL1YLR005W SGM1P47166 707 aa4.46□□□□□ -1.7
SSL1YLR005W LIF1P53150 421 aa4.46□□□□□ -1.7
SSL1YLR005W MRPS35P53292 345 aa4.46□□□□□ -1.7
SSL1YLR005W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
SSL1YLR005W VPS72Q03388 795 aa4.46□□□□□ -1.7
SSL1YLR005W SKY1Q03656 742 aa4.46□□□□□ -1.7
SSL1YLR005W YMR321CQ04898 105 aa4.46□□□□□ -1.7
SSL1YLR005W RCL1Q08096 367 aaPredicted RBP4.46□□□□□ -1.7
SSL1YLR005W PTC5Q12511 572 aa4.46□□□□□ -1.7
SSL1YLR005W NUC1P08466 329 aa4.45□□□□□ -1.7
SSL1YLR005W SWI6P09959 803 aa4.45□□□□□ -1.7
SSL1YLR005W ATE1P16639 503 aa4.45□□□□□ -1.7
SSL1YLR005W TPM1P17536 199 aaKnown RBP4.45□□□□□ -1.7
SSL1YLR005W KIP1P28742 1111 aa4.45□□□□□ -1.7
SSL1YLR005W PRO3P32263 286 aaKnown RBP4.45□□□□□ -1.7
SSL1YLR005W YSC84P32793 468 aa4.45□□□□□ -1.7
SSL1YLR005W ALD5P40047 520 aaKnown RBP4.45□□□□□ -1.7
SSL1YLR005W TPM2P40414 161 aa4.45□□□□□ -1.7
SSL1YLR005W ALG2P43636 503 aa4.45□□□□□ -1.7
SSL1YLR005W AZR1P50080 613 aa4.45□□□□□ -1.7
SSL1YLR005W YGL039WP53183 348 aaKnown RBP4.45□□□□□ -1.7
SSL1YLR005W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SSL1YLR005W RPT6Q01939 405 aaKnown RBP4.45□□□□□ -1.7
SSL1YLR005W ROD1Q02805 837 aa4.45□□□□□ -1.7
SSL1YLR005W MSC2Q03455 724 aa4.45□□□□□ -1.7
SSL1YLR005W RKM2Q03942 479 aa4.45□□□□□ -1.7
SSL1YLR005W RKM4Q12504 494 aa4.45□□□□□ -1.7
SSL1YLR005W PHR1P05066 565 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SSL1YLR005W MAS2P11914 482 aa4.44□□□□□ -1.7
SSL1YLR005W ACE2P21192 770 aa4.44□□□□□ -1.7
SSL1YLR005W PRE9P23638 258 aaKnown RBP4.44□□□□□ -1.7
SSL1YLR005W FUB1P25659 250 aa4.44□□□□□ -1.7
SSL1YLR005W SYN8P31377 255 aa4.44□□□□□ -1.7
SSL1YLR005W ANP1P32629 500 aa4.44□□□□□ -1.7
SSL1YLR005W ALG3P38179 458 aa4.44□□□□□ -1.7
SSL1YLR005W CRG1P38892 291 aaRIP-Chip data4.44□□□□□ -1.7not detected
SSL1YLR005W SCS3P53012 380 aa4.44□□□□□ -1.7
SSL1YLR005W HUL5P53119 910 aa4.44□□□□□ -1.7
SSL1YLR005W PIB2P53191 635 aa4.44□□□□□ -1.7
SSL1YLR005W MRPL22P53881 309 aa4.44□□□□□ -1.7
SSL1YLR005W PTA1Q01329 785 aaPredicted RBP4.44□□□□□ -1.7
SSL1YLR005W HDA2Q06629 674 aa4.44□□□□□ -1.7
SSL1YLR005W DAP1Q12091 152 aa4.44□□□□□ -1.7
SSL1YLR005W ATG11Q12527 1178 aa4.44□□□□□ -1.7
SSL1YLR005W CHO2P05374 869 aaKnown RBP4.43□□□□□ -1.7
SSL1YLR005W PWP2P25635 923 aaKnown RBP4.43□□□□□ -1.7
SSL1YLR005W BUD2P33314 1104 aa4.43□□□□□ -1.7
SSL1YLR005W FLR1P38124 548 aa4.43□□□□□ -1.7
SSL1YLR005W AIM3P38266 947 aaKnown RBP4.43□□□□□ -1.7
SSL1YLR005W HMF1P40037 129 aaKnown RBP4.43□□□□□ -1.7
SSL1YLR005W MYO5Q04439 1219 aaKnown RBP4.43□□□□□ -1.7
SSL1YLR005W SPN1Q06505 410 aaPredicted RBP4.43□□□□□ -1.7
SSL1YLR005W VIP1Q06685 1146 aaKnown RBP4.43□□□□□ -1.7
SSL1YLR005W YLL058WQ12198 575 aa4.43□□□□□ -1.7
SSL1YLR005W SES1P07284 462 aaKnown RBP4.42□□□□□ -1.7
SSL1YLR005W CYC8P14922 966 aa4.42□□□□□ -1.7
SSL1YLR005W RPL8AP17076 256 aaKnown RBP4.42□□□□□ -1.7
SSL1YLR005W MAK31P23059 88 aa4.42□□□□□ -1.7
SSL1YLR005W THI80P35202 319 aa4.42□□□□□ -1.7
SSL1YLR005W RFC1P38630 861 aaKnown RBP4.42□□□□□ -1.7
SSL1YLR005W FMS1P50264 508 aa4.42□□□□□ -1.7
SSL1YLR005W MET13P53128 600 aa4.42□□□□□ -1.7
SSL1YLR005W MDR1P53258 950 aa4.42□□□□□ -1.7
SSL1YLR005W SPR28Q04921 423 aa4.42□□□□□ -1.7
SSL1YLR005W RSC58Q07979 502 aa4.42□□□□□ -1.7
SSL1YLR005W MCD1Q12158 566 aa4.42□□□□□ -1.7
SSL1YLR005W FAB1P34756 2278 aa4.42□□□□□ -1.7
SSL1YLR005W MSD1P15179 658 aaKnown RBP4.41□□□□□ -1.7
SSL1YLR005W SRO9P25567 434 aaKnown RBP4.41□□□□□ -1.7
SSL1YLR005W RME1P32338 300 aaKnown RBP4.41□□□□□ -1.7
SSL1YLR005W MGE1P38523 228 aa4.41□□□□□ -1.7
SSL1YLR005W TAF1P46677 1066 aa4.41□□□□□ -1.7
SSL1YLR005W RPS7BP48164 190 aaKnown RBP4.41□□□□□ -1.7
SSL1YLR005W GCR1P07261 785 aa4.4□□□□□ -1.7
SSL1YLR005W SRP54P20424 541 aaKnown RBP4.4□□□□□ -1.7
SSL1YLR005W RER2P35196 286 aa4.4□□□□□ -1.7
SSL1YLR005W MDM1Q01846 1127 aa4.4□□□□□ -1.7
SSL1YLR005W HOS3Q02959 697 aaKnown RBP4.4□□□□□ -1.7
SSL1YLR005W MMR1Q06324 491 aa4.4□□□□□ -1.7
SSL1YLR005W SUE1Q06524 206 aa4.4□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms