RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C SRD1P09007 221 aa5.7□□□□□ -1.5
RPF2YKR081C PPS1P38148 807 aa5.7□□□□□ -1.5
RPF2YKR081C NPY1P53164 384 aa5.7□□□□□ -1.5
RPF2YKR081C YLR149CQ99296 730 aa5.7□□□□□ -1.5
RPF2YKR081C HOG1P32485 435 aa5.69□□□□□ -1.5
RPF2YKR081C YJL163CP46996 555 aa5.69□□□□□ -1.5
RPF2YKR081C PRP31P49704 494 aaPredicted RBP5.69□□□□□ -1.5
RPF2YKR081C ORC4P54791 529 aa5.69□□□□□ -1.5
RPF2YKR081C MUK1Q02866 612 aa5.69□□□□□ -1.5
RPF2YKR081C NHX1Q04121 633 aa5.69□□□□□ -1.5
RPF2YKR081C COG8Q04632 607 aa5.69□□□□□ -1.5
RPF2YKR081C RRP14P36080 434 aaKnown RBP5.68□□□□□ -1.5
RPF2YKR081C HSL7P38274 827 aa5.68□□□□□ -1.5
RPF2YKR081C GAD1Q04792 585 aa5.68□□□□□ -1.5
RPF2YKR081C IRC10Q08118 586 aa5.68□□□□□ -1.5
RPF2YKR081C NTG2Q08214 380 aa5.68□□□□□ -1.5
RPF2YKR081C YEL1P34225 687 aa5.67□□□□□ -1.5
RPF2YKR081C YHL017WP38745 532 aa5.67□□□□□ -1.5
RPF2YKR081C QRI1P43123 477 aaKnown RBP5.67□□□□□ -1.5
RPF2YKR081C TEX1P53851 422 aaKnown RBP5.67□□□□□ -1.5
RPF2YKR081C ORC1P54784 914 aaPredicted RBP5.67□□□□□ -1.5
RPF2YKR081C Q0142Q9ZZW4 58 aa5.67□□□□□ -1.5
RPF2YKR081C RAD18P10862 487 aa5.66□□□□□ -1.5
RPF2YKR081C MIH1P23748 554 aa5.66□□□□□ -1.5
RPF2YKR081C MTH1P35198 433 aa5.66□□□□□ -1.5
RPF2YKR081C APL2P36000 726 aaPredicted RBP5.66□□□□□ -1.5
RPF2YKR081C SPC42P36094 363 aa5.66□□□□□ -1.5
RPF2YKR081C YKR051WP36142 418 aa5.66□□□□□ -1.5
RPF2YKR081C MIP6P38760 659 aaKnown RBP5.66□□□□□ -1.5
RPF2YKR081C HOS4P40480 1083 aa5.66□□□□□ -1.5
RPF2YKR081C BAP3P41815 604 aa5.66□□□□□ -1.5
RPF2YKR081C GND2P53319 492 aa5.66□□□□□ -1.5
RPF2YKR081C HBT1Q07653 1046 aaKnown RBP5.66□□□□□ -1.5
RPF2YKR081C IRC13Q08630 104 aa5.66□□□□□ -1.5
RPF2YKR081C APT2P36973 181 aa5.65□□□□□ -1.5
RPF2YKR081C RNH70P53331 553 aa5.65□□□□□ -1.5
RPF2YKR081C ALG12P53730 551 aa5.65□□□□□ -1.5
RPF2YKR081C RIA1P53893 1110 aa5.65□□□□□ -1.5
RPF2YKR081C LGE1Q02796 332 aaKnown RBP5.65□□□□□ -1.5
RPF2YKR081C RPN7Q06103 429 aaKnown RBP5.65□□□□□ -1.5
RPF2YKR081C ADE2P21264 571 aaKnown RBP5.64□□□□□ -1.51
RPF2YKR081C PPG1P32838 368 aa5.64□□□□□ -1.51
RPF2YKR081C YKR018CP36114 725 aa5.64□□□□□ -1.51
RPF2YKR081C BCD1P38772 366 aa5.64□□□□□ -1.51
RPF2YKR081C FMP52P40008 231 aa5.64□□□□□ -1.51
RPF2YKR081C DOT6P40059 670 aaKnown RBP5.64□□□□□ -1.51
RPF2YKR081C ARG5,6Q01217 863 aa5.64□□□□□ -1.51
RPF2YKR081C MCM21Q06675 368 aa5.64□□□□□ -1.51
RPF2YKR081C PCL2P25693 308 aa5.63□□□□□ -1.51
RPF2YKR081C HIS7P33734 552 aaKnown RBP5.63□□□□□ -1.51
RPF2YKR081C TRZ1P36159 838 aaPredicted RBP5.63□□□□□ -1.51
RPF2YKR081C YHR112CP38716 378 aa5.63□□□□□ -1.51
RPF2YKR081C ATF1P40353 525 aa5.63□□□□□ -1.51
RPF2YKR081C UBC11P52492 156 aa5.63□□□□□ -1.51
RPF2YKR081C PCL10P53124 433 aa5.63□□□□□ -1.51
RPF2YKR081C CTK1Q03957 528 aaKnown RBP5.63□□□□□ -1.51
RPF2YKR081C SGO1Q08490 590 aa5.63□□□□□ -1.51
RPF2YKR081C CCT3P39077 534 aaKnown RBP5.62□□□□□ -1.51
RPF2YKR081C ATG33Q06485 197 aa5.62□□□□□ -1.51
RPF2YKR081C SFL1P20134 766 aa5.61□□□□□ -1.51
RPF2YKR081C CUE2P36075 443 aaKnown RBP5.61□□□□□ -1.51
RPF2YKR081C SDS3P40505 327 aa5.61□□□□□ -1.51
RPF2YKR081C UBC9P50623 157 aaPredicted RBP5.61□□□□□ -1.51
RPF2YKR081C TEL2P53038 688 aa5.61□□□□□ -1.51
RPF2YKR081C YLR001CQ07895 862 aa5.61□□□□□ -1.51
RPF2YKR081C HMG1P12683 1054 aa5.6□□□□□ -1.51
RPF2YKR081C PCM1P38628 557 aaKnown RBP5.6□□□□□ -1.51
RPF2YKR081C PCL5P38794 229 aa5.6□□□□□ -1.51
RPF2YKR081C NMD2P38798 1089 aaKnown RBP5.6□□□□□ -1.51
RPF2YKR081C REV7P38927 245 aa5.6□□□□□ -1.51
RPF2YKR081C REC102Q02721 264 aa5.6□□□□□ -1.51
RPF2YKR081C TFB2Q02939 513 aa5.6□□□□□ -1.51
RPF2YKR081C GIN4Q12263 1142 aa5.6□□□□□ -1.51
RPF2YKR081C HIR1P32479 840 aa5.59□□□□□ -1.51
RPF2YKR081C GID8P40208 455 aa5.59□□□□□ -1.51
RPF2YKR081C AIM14P53109 570 aa5.59□□□□□ -1.51
RPF2YKR081C MTL1P53214 551 aa5.59□□□□□ -1.51
RPF2YKR081C YAP1802P53309 568 aa5.59□□□□□ -1.51
RPF2YKR081C YNL193WP53870 558 aa5.59□□□□□ -1.51
RPF2YKR081C SSL2Q00578 843 aa5.59□□□□□ -1.51
RPF2YKR081C SIR3P06701 978 aa5.58□□□□□ -1.52
RPF2YKR081C LYS9P38999 446 aa5.58□□□□□ -1.52
RPF2YKR081C HMO1Q03973 246 aaKnown RBP5.58□□□□□ -1.52
RPF2YKR081C MRH1Q12117 320 aaPredicted RBP5.58□□□□□ -1.52
RPF2YKR081C NOP14Q99207 810 aaKnown RBP5.58□□□□□ -1.52
RPF2YKR081C HRP1Q99383 534 aaKnown RBP5.58□□□□□ -1.52
RPF2YKR081C CCR4P31384 837 aaKnown RBP5.57□□□□□ -1.52
RPF2YKR081C FMO1P38866 432 aa5.57□□□□□ -1.52
RPF2YKR081C NUP60P39705 539 aa5.57□□□□□ -1.52
RPF2YKR081C ARP4P80428 489 aa5.57□□□□□ -1.52
RPF2YKR081C YKL033W-AQ86ZR7 236 aa5.57□□□□□ -1.52
RPF2YKR081C MVD1P32377 396 aaKnown RBP5.56□□□□□ -1.52
RPF2YKR081C SFP1P32432 683 aa5.56□□□□□ -1.52
RPF2YKR081C MNN1P39106 762 aa5.56□□□□□ -1.52
RPF2YKR081C UTP14Q04500 899 aaKnown RBP5.56□□□□□ -1.52
RPF2YKR081C PYC1P11154 1178 aaKnown RBP5.55□□□□□ -1.52
RPF2YKR081C RNR1P21524 888 aaKnown RBP5.55□□□□□ -1.52
RPF2YKR081C ERG6P25087 383 aaKnown RBP5.55□□□□□ -1.52
RPF2YKR081C PEX2P32800 271 aa5.55□□□□□ -1.52
RPF2YKR081C MNN4P36044 1178 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms