RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W QNS1P38795 714 aaKnown RBP6.07□□□□□ -1.44
CBF1YJR060W SSB2P40150 613 aaKnown RBP6.07□□□□□ -1.44
CBF1YJR060W ENT3P47160 408 aa6.07□□□□□ -1.44
CBF1YJR060W ERP6P53198 216 aa6.07□□□□□ -1.44
CBF1YJR060W RTS3P53289 263 aa6.07□□□□□ -1.44
CBF1YJR060W YLR225CQ05948 407 aaKnown RBP6.07□□□□□ -1.44
CBF1YJR060W EAF1Q06337 982 aa6.07□□□□□ -1.44
CBF1YJR060W UBX5Q06682 500 aa6.07□□□□□ -1.44
CBF1YJR060W PUS7Q08647 676 aaKnown RBP6.07□□□□□ -1.44
CBF1YJR060W CIT1P00890 479 aa6.06□□□□□ -1.44
CBF1YJR060W CHO2P05374 869 aaKnown RBP6.06□□□□□ -1.44
CBF1YJR060W RNR2P09938 399 aaKnown RBP6.06□□□□□ -1.44
CBF1YJR060W ERR1P0CX10 437 aa6.06□□□□□ -1.44
CBF1YJR060W ERR2P0CX11 437 aa6.06□□□□□ -1.44
CBF1YJR060W PER1P25625 357 aa6.06□□□□□ -1.44
CBF1YJR060W ARE1P25628 610 aa6.06□□□□□ -1.44
CBF1YJR060W IMP2'P32351 346 aa6.06□□□□□ -1.44
CBF1YJR060W ANP1P32629 500 aa6.06□□□□□ -1.44
CBF1YJR060W MOT2P34909 587 aaKnown RBP6.06□□□□□ -1.44
CBF1YJR060W MCD4P36051 919 aa6.06□□□□□ -1.44
CBF1YJR060W YKR073CP36153 106 aa6.06□□□□□ -1.44
CBF1YJR060W OMA1P36163 345 aa6.06□□□□□ -1.44
CBF1YJR060W SEA4P38164 1038 aa6.06□□□□□ -1.44
CBF1YJR060W HXT13P39924 564 aa6.06□□□□□ -1.44
CBF1YJR060W HXT17P53631 564 aa6.06□□□□□ -1.44
CBF1YJR060W HXT15P54854 567 aa6.06□□□□□ -1.44
CBF1YJR060W ESC2Q06340 456 aa6.06□□□□□ -1.44
CBF1YJR060W FMP25Q08023 583 aa6.06□□□□□ -1.44
CBF1YJR060W HRK1Q08732 759 aaKnown RBP6.06□□□□□ -1.44
CBF1YJR060W PTC5Q12511 572 aa6.06□□□□□ -1.44
CBF1YJR060W CAN1P04817 590 aa6.05□□□□□ -1.44
CBF1YJR060W CHS3P29465 1165 aa6.05□□□□□ -1.44
CBF1YJR060W PRO3P32263 286 aaKnown RBP6.05□□□□□ -1.44
CBF1YJR060W MKK2P32491 506 aa6.05□□□□□ -1.44
CBF1YJR060W YKR018CP36114 725 aa6.05□□□□□ -1.44
CBF1YJR060W ERG7P38604 731 aa6.05□□□□□ -1.44
CBF1YJR060W HUL4P40985 892 aa6.05□□□□□ -1.44
CBF1YJR060W SOL4P53315 255 aa6.05□□□□□ -1.44
CBF1YJR060W TY3A-GQ12173 290 aa6.05□□□□□ -1.44
CBF1YJR060W TY3A-IQ99219 290 aa6.05□□□□□ -1.44
CBF1YJR060W INO1P11986 533 aa6.04□□□□□ -1.44
CBF1YJR060W MAK31P23059 88 aa6.04□□□□□ -1.44
CBF1YJR060W CDC60P26637 1090 aaKnown RBP6.04□□□□□ -1.44
CBF1YJR060W MAC1P35192 417 aa6.04□□□□□ -1.44
CBF1YJR060W ALG3P38179 458 aa6.04□□□□□ -1.44
CBF1YJR060W RPT6Q01939 405 aaKnown RBP6.04□□□□□ -1.44
CBF1YJR060W VPS30Q02948 557 aa6.04□□□□□ -1.44
CBF1YJR060W YML037CQ03703 340 aa6.04□□□□□ -1.44
CBF1YJR060W MYO5Q04439 1219 aaKnown RBP6.04□□□□□ -1.44
CBF1YJR060W TFC6Q06339 672 aa6.04□□□□□ -1.44
CBF1YJR060W CFT2Q12102 859 aaPredicted RBP6.04□□□□□ -1.44
CBF1YJR060W YVC1Q12324 675 aa6.04□□□□□ -1.44
CBF1YJR060W RNR3P21672 869 aaKnown RBP6.03□□□□□ -1.44
CBF1YJR060W SYP1P25623 870 aaKnown RBP6.03□□□□□ -1.44
CBF1YJR060W VPS45P38932 577 aa6.03□□□□□ -1.44
CBF1YJR060W SNF7P39929 240 aaKnown RBP6.03□□□□□ -1.44
CBF1YJR060W NCS6P53088 359 aa6.03□□□□□ -1.44
CBF1YJR060W LSB1P53281 241 aa6.03□□□□□ -1.44
CBF1YJR060W FOL1P53848 824 aa6.03□□□□□ -1.44
CBF1YJR060W SGD1Q06132 899 aa6.03□□□□□ -1.44
CBF1YJR060W NOP14Q99207 810 aaKnown RBP6.03□□□□□ -1.44
CBF1YJR060W GCD1P09032 578 aaPredicted RBP6.02□□□□□ -1.45
CBF1YJR060W MATALPHA2P0CY08 210 aa6.02□□□□□ -1.45
CBF1YJR060W HMLALPHA2P0CY09 210 aa6.02□□□□□ -1.45
CBF1YJR060W PRP9P19736 530 aaKnown RBP6.02□□□□□ -1.45
CBF1YJR060W LIP5P32875 414 aa6.02□□□□□ -1.45
CBF1YJR060W MAL31P38156 614 aa6.02□□□□□ -1.45
CBF1YJR060W CRP1P38845 465 aaKnown RBP6.02□□□□□ -1.45
CBF1YJR060W GPB2P39717 880 aa6.02□□□□□ -1.45
CBF1YJR060W OYE3P41816 400 aaPredicted RBP6.02□□□□□ -1.45
CBF1YJR060W ATG36P46983 293 aa6.02□□□□□ -1.45
CBF1YJR060W PFD1P46988 109 aa6.02□□□□□ -1.45
CBF1YJR060W YJL045WP47052 634 aa6.02□□□□□ -1.45
CBF1YJR060W YKE2P52553 114 aa6.02□□□□□ -1.45
CBF1YJR060W PGA3Q12746 312 aaKnown RBP6.02□□□□□ -1.45
CBF1YJR060W NUC1P08466 329 aa6.01□□□□□ -1.45
CBF1YJR060W FBP1P09201 348 aa6.01□□□□□ -1.45
CBF1YJR060W SAM2P19358 384 aaKnown RBP6.01□□□□□ -1.45
CBF1YJR060W KIP1P28742 1111 aa6.01□□□□□ -1.45
CBF1YJR060W PUB1P32588 453 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
CBF1YJR060W PHO88P38264 188 aaPredicted RBP6.01□□□□□ -1.45
CBF1YJR060W OPY1P38271 328 aa6.01□□□□□ -1.45
CBF1YJR060W TOM71P38825 639 aaKnown RBP6.01□□□□□ -1.45
CBF1YJR060W CSM2P40465 213 aa6.01□□□□□ -1.45
CBF1YJR060W ALR2P43553 858 aa6.01□□□□□ -1.45
CBF1YJR060W CNN1P43618 361 aa6.01□□□□□ -1.45
CBF1YJR060W INP52P50942 1183 aa6.01□□□□□ -1.45
CBF1YJR060W UTP8P53276 713 aaKnown RBP6.01□□□□□ -1.45
CBF1YJR060W TRE1Q08919 783 aa6.01□□□□□ -1.45
CBF1YJR060W MOT1P32333 1867 aa6□□□□□ -1.45
CBF1YJR060W KRS1P15180 591 aaKnown RBP6□□□□□ -1.45
CBF1YJR060W VMA2P16140 517 aaKnown RBP6□□□□□ -1.45
CBF1YJR060W EUG1P32474 517 aa6□□□□□ -1.45
CBF1YJR060W PIN4P34217 668 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
CBF1YJR060W YKL107WP34251 309 aa6□□□□□ -1.45
CBF1YJR060W YHL012WP38709 493 aa6□□□□□ -1.45
CBF1YJR060W YEN1P40028 759 aa6□□□□□ -1.45
CBF1YJR060W TPM2P40414 161 aa6□□□□□ -1.45
CBF1YJR060W ARP5P53946 755 aa6□□□□□ -1.45
CBF1YJR060W SDH1Q00711 640 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms