RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	NDJ1	Q12366	352 aa		6.13	□□□□□ -1.43
RSC30	YHR056C	NAT1	P12945	854 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
RSC30	YHR056C	SWE1	P32944	819 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	PIK1	P39104	1066 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	THI6	P41835	540 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	DAS1	P47005	663 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	TDA7	P53882	636 aa	Predicted RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	ARK1	P53974	638 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	HER2	Q03557	464 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	YLR407W	Q06070	228 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	PSK2	Q08217	1101 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	BEM2	P39960	2167 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	FOB1	O13329	566 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	ASP3-2	P0CX77	362 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	ASP3-3	P0CX78	362 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	ASP3-4	P0CX79	362 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	ASP3-1	P0CZ17	362 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	PDC6	P26263	563 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	YIL161W	P40449	235 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	APC5	Q08683	685 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	CLP1	Q08685	445 aa	Predicted RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	GPM2	Q12008	311 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	PHO8	P11491	566 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	VMA1	P17255	1071 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	BAT1	P38891	393 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	YJR061W	P40355	935 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	ORC5	P50874	479 aa		6.12	□□□□□ -1.43
RSC30	YHR056C	SDA1	P53313	767 aa	Known RBP	6.12	□□□□□ -1.43
RSC30	YHR056C	TCD2	P36101	447 aa	Known RBP	6.11	□□□□□ -1.43
RSC30	YHR056C	UTH1	P36135	365 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	MRPL40	P36534	297 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	UME6	P39001	836 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	GDH3	P39708	457 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	SEG1	Q04279	960 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	GET3	Q12154	354 aa	Known RBP	6.11	□□□□□ -1.43
RSC30	YHR056C	PFK1	P16861	987 aa	Known RBP	6.11	□□□□□ -1.43
RSC30	YHR056C	SCJ1	P25303	377 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	WAR1	Q03631	944 aa		6.11	□□□□□ -1.43
RSC30	YHR056C	YEL076C-A	P0CX16	216 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	YLR464W	P0CX17	216 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	GIP4	P39732	760 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	YEL076C	P39971	216 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	STB4	P50104	949 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	FLC3	P53121	802 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	YKL023W	P36103	277 aa	Known RBP	6.1	□□□□□ -1.43
RSC30	YHR056C	PGM2	P37012	569 aa	Known RBP	6.1	□□□□□ -1.43
RSC30	YHR056C	PIH1	P38768	344 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	KAP123	P40069	1113 aa	Known RBP	6.1	□□□□□ -1.43
RSC30	YHR056C	FTR1	P40088	404 aa		6.1	□□□□□ -1.43
RSC30	YHR056C	ULP2	P40537	1034 aa	Predicted RBP	6.1	□□□□□ -1.43
RSC30	YHR056C	DSS4	P32601	143 aa		6.09	□□□□□ -1.43
RSC30	YHR056C	YIR007W	P40566	764 aa		6.09	□□□□□ -1.43
RSC30	YHR056C	EPL1	P43572	832 aa		6.09	□□□□□ -1.43
RSC30	YHR056C	ARP5	P53946	755 aa		6.09	□□□□□ -1.43
RSC30	YHR056C	TAF13	P11747	167 aa		6.09	□□□□□ -1.44
RSC30	YHR056C	CCR4	P31384	837 aa	Known RBP	6.09	□□□□□ -1.44
RSC30	YHR056C	OCA5	P38738	679 aa		6.09	□□□□□ -1.44
RSC30	YHR056C	ERC1	P38767	581 aa		6.09	□□□□□ -1.44
RSC30	YHR056C	HEM14	P40012	539 aa		6.09	□□□□□ -1.44
RSC30	YHR056C	ENT3	P47160	408 aa		6.09	□□□□□ -1.44
RSC30	YHR056C	YNR065C	P53751	1116 aa		6.09	□□□□□ -1.44
RSC30	YHR056C	TBS1	P38114	1094 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	SNU56	Q03782	492 aa	Known RBP	6.08	□□□□□ -1.44
RSC30	YHR056C	PRM6	Q04705	352 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	DON1	Q05610	365 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	YPL277C	Q08989	487 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	CDC6	P09119	513 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	RPL4A	P10664	362 aa	Known RBP	6.08	□□□□□ -1.44
RSC30	YHR056C	RGR1	P19263	1082 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	SRX1	P36077	127 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	DAK2	P43550	591 aa		6.08	□□□□□ -1.44
RSC30	YHR056C	RPL4B	P49626	362 aa	Known RBP	6.08	□□□□□ -1.44
RSC30	YHR056C	HSF1	P10961	833 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	SAP190	P36123	1033 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	PPX1	P38698	397 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	YGL036W	P53185	909 aa	Predicted RBP	6.07	□□□□□ -1.44
RSC30	YHR056C	FMP27	Q06179	2628 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	TUF1	P02992	437 aa	Known RBP	6.07	□□□□□ -1.44
RSC30	YHR056C	HSP78	P33416	811 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	YBR225W	P38321	900 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	FHL1	P39521	936 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	SMC3	P47037	1230 aa		6.07	□□□□□ -1.44
RSC30	YHR056C	ECM22	Q05958	814 aa	Predicted RBP	6.07	□□□□□ -1.44
RSC30	YHR056C	GUT1	P32190	709 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	SDS3	P40505	327 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	BUD6	P41697	788 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	GUP1	P53154	560 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	SPO21	Q12411	609 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	GIS3	Q12418	502 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	CDD1	Q06549	142 aa		6.06	□□□□□ -1.44
RSC30	YHR056C	RTK1	Q12100	620 aa	Predicted RBP	6.06	□□□□□ -1.44
RSC30	YHR056C	VPS1	P21576	704 aa	Known RBP	6.05	□□□□□ -1.44
RSC30	YHR056C	ASG1	P40467	964 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	AIM23	P47015	356 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	TOF1	P53840	1238 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	UTP14	Q04500	899 aa	Known RBP	6.05	□□□□□ -1.44
RSC30	YHR056C	TYE7	P33122	291 aa	Predicted RBP	6.05	□□□□□ -1.44
RSC30	YHR056C	ECM13	P38195	257 aa		6.05	□□□□□ -1.44
RSC30	YHR056C	YFL034W	P43564	1073 aa		6.05	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms