RNA–Protein interactions for RNA: YHR042W

NCP1, Transcript of NADP-cytochrome P450 reductase, yeast

Gene NCP1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCP1	YHR042W	CSG2	P35206	410 aa		11.94	□□□□□ -0.5
NCP1	YHR042W	SUB1	P54000	292 aa	Known RBP	11.94	□□□□□ -0.5
NCP1	YHR042W	UBX4	P54730	416 aa		11.94	□□□□□ -0.5
NCP1	YHR042W	CDC53	Q12018	815 aa	Known RBP	11.94	□□□□□ -0.5
NCP1	YHR042W	GCR1	P07261	785 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	CCL1	P37366	393 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	VPS53	P47061	822 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	SHR3	Q02774	210 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
NCP1	YHR042W	ALR1	Q08269	859 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	AIM7	Q12156	149 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	YMR085W	P0CF18	432 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	RNR1	P21524	888 aa	Known RBP	11.93	□□□□□ -0.5
NCP1	YHR042W	VAN1	P23642	535 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	MCR1	P36060	302 aa	Known RBP	11.93	□□□□□ -0.5
NCP1	YHR042W	HUL5	P53119	910 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	DRN1	P53255	507 aa	Known RBP	11.93	□□□□□ -0.5
NCP1	YHR042W	VPS16	Q03308	798 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	PEX29	Q03370	554 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	VPS72	Q03388	795 aa		11.93	□□□□□ -0.5
NCP1	YHR042W	YOR059C	Q08448	450 aa	Known RBP	11.93	□□□□□ -0.5
NCP1	YHR042W	THS1	P04801	734 aa	Known RBP	11.92	□□□□□ -0.5
NCP1	YHR042W	ARD1	P07347	238 aa	Predicted RBP	11.92	□□□□□ -0.5
NCP1	YHR042W	HEM15	P16622	393 aa		11.92	□□□□□ -0.5
NCP1	YHR042W	MGT1	P26188	188 aa		11.92	□□□□□ -0.5
NCP1	YHR042W	SWI3	P32591	825 aa		11.92	□□□□□ -0.5
NCP1	YHR042W	CBR1	P38626	284 aa	Known RBP	11.92	□□□□□ -0.5
NCP1	YHR042W	TMA22	P47089	198 aa	Predicted RBP	11.92	□□□□□ -0.5
NCP1	YHR042W	UBP15	P50101	1230 aa		11.92	□□□□□ -0.5
NCP1	YHR042W	TFB2	Q02939	513 aa		11.92	□□□□□ -0.5
NCP1	YHR042W	MVD1	P32377	396 aa	Known RBP	11.91	□□□□□ -0.5
NCP1	YHR042W	GLC3	P32775	704 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	PAM1	P37304	830 aa	Known RBP	11.91	□□□□□ -0.5
NCP1	YHR042W	PHO86	P46956	311 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	ORC5	P50874	479 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	PPM1	Q04081	328 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	UBX5	Q06682	500 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	GUD1	Q07729	489 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	RAD10	P06838	210 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	ILV2	P07342	687 aa	Known RBP	11.91	□□□□□ -0.5
NCP1	YHR042W	CDC42	P19073	191 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	AEP2	P22136	580 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	COT1	P32798	439 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	SBE2	P42223	864 aa	Known RBP	11.91	□□□□□ -0.5
NCP1	YHR042W	RTT102	P53330	157 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	SPC24	Q04477	213 aa		11.91	□□□□□ -0.5
NCP1	YHR042W	IWR1	Q07532	353 aa	Predicted RBP	11.91	□□□□□ -0.5
NCP1	YHR042W	VMA1	P17255	1071 aa	Known RBP	11.9	□□□□□ -0.5
NCP1	YHR042W	YDR090C	Q03193	310 aa		11.9	□□□□□ -0.5
NCP1	YHR042W	MAG2	Q06436	670 aa	Known RBP	11.9	□□□□□ -0.5
NCP1	YHR042W	OSW1	Q08692	278 aa		11.9	□□□□□ -0.5
NCP1	YHR042W	DED1	P06634	604 aa	Known RBP	11.9	□□□□□ -0.51
NCP1	YHR042W	NIP1	P32497	812 aa	Known RBP	11.9	□□□□□ -0.51
NCP1	YHR042W	POP4	P38336	279 aa		11.9	□□□□□ -0.51
NCP1	YHR042W	ALA1	P40825	983 aa	Known RBP	11.9	□□□□□ -0.51
NCP1	YHR042W	YML6	P51998	286 aa		11.9	□□□□□ -0.51
NCP1	YHR042W	RPL22B	P56628	122 aa	Known RBP	11.9	□□□□□ -0.51
NCP1	YHR042W	ROD1	Q02805	837 aa		11.9	□□□□□ -0.51
NCP1	YHR042W	SHE9	Q04172	456 aa		11.9	□□□□□ -0.51
NCP1	YHR042W	BI2	P03873	423 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	BI4	P03879	638 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	YML002W	P0CF17	737 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	SFL1	P20134	766 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	MLS1	P30952	554 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	UTR4	P32626	227 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	INP52	P50942	1183 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	YNL040W	P53960	456 aa	Predicted RBP	11.89	□□□□□ -0.51
NCP1	YHR042W	SMC5	Q08204	1093 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	IES4	Q08561	116 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	CSR2	Q12734	1121 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	BI3	Q9ZZW7	517 aa		11.89	□□□□□ -0.51
NCP1	YHR042W	TPS2	P31688	896 aa	Known RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	DUG2	P38149	878 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	YBR032W	P38223	100 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	DYS1	P38791	387 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	TMN3	P40071	706 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	AIM21	P40563	679 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	TFG1	P41895	735 aa	Predicted RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	SQS1	P53866	767 aa	Known RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	YMR027W	Q04371	470 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	ISA1	Q07821	250 aa	Predicted RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	PMS1	P14242	873 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	MRPL25	P23369	157 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	RRT12	P25381	491 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	RAD5	P32849	1169 aa	Predicted RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	SEG2	P34250	1132 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	REG2	P38232	338 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	OAF1	P39720	1047 aa	Predicted RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	NPP2	P39997	493 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	EMW1	P42842	904 aa	Known RBP	11.88	□□□□□ -0.51
NCP1	YHR042W	ALY2	P47029	1046 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	ILM1	P47155	203 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	TPO2	P53283	614 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	COG6	P53959	839 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	YDR461C-A	Q2V2P7	80 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	AI5_BETA	Q9ZZX0	354 aa		11.88	□□□□□ -0.51
NCP1	YHR042W	YDJ1	P25491	409 aa	Known RBP	11.87	□□□□□ -0.51
NCP1	YHR042W	EFB1	P32471	206 aa	Known RBP	11.87	□□□□□ -0.51
NCP1	YHR042W	STE13	P33894	931 aa		11.87	□□□□□ -0.51
NCP1	YHR042W	AVT3	P36062	692 aa		11.87	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 91.8 ms