RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	PRP31	P49704	494 aa	Predicted RBP	5.23	□□□□□ -1.57
SPO11	YHL022C	YTA7	P40340	1379 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	SRD1	P09007	221 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	ADE2	P21264	571 aa	Known RBP	5.22	□□□□□ -1.57
SPO11	YHL022C	YKR051W	P36142	418 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	BCD1	P38772	366 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	PCL5	P38794	229 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	NPY1	P53164	384 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	YBP2	P53169	641 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	GAD1	Q04792	585 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	HBT1	Q07653	1046 aa	Known RBP	5.22	□□□□□ -1.57
SPO11	YHL022C	IRC10	Q08118	586 aa		5.22	□□□□□ -1.57
SPO11	YHL022C	RAD18	P10862	487 aa		5.21	□□□□□ -1.58
SPO11	YHL022C	PEX6	P33760	1030 aa		5.21	□□□□□ -1.58
SPO11	YHL022C	SPC42	P36094	363 aa		5.21	□□□□□ -1.58
SPO11	YHL022C	YHR112C	P38716	378 aa		5.21	□□□□□ -1.58
SPO11	YHL022C	SDS3	P40505	327 aa		5.21	□□□□□ -1.58
SPO11	YHL022C	HOG1	P32485	435 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	BAP3	P41815	604 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	QRI1	P43123	477 aa	Known RBP	5.2	□□□□□ -1.58
SPO11	YHL022C	UBC11	P52492	156 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	ORC4	P54791	529 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	UGO1	Q03327	502 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	NHX1	Q04121	633 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	ATG11	Q12527	1178 aa		5.2	□□□□□ -1.58
SPO11	YHL022C	MIP6	P38760	659 aa	Known RBP	5.19	□□□□□ -1.58
SPO11	YHL022C	ECM1	P39715	212 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	FMP52	P40008	231 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	OSW7	P43611	510 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	STU2	P46675	888 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	UBC9	P50623	157 aa	Predicted RBP	5.19	□□□□□ -1.58
SPO11	YHL022C	MTL1	P53214	551 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	RIA1	P53893	1110 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	ARG5,6	Q01217	863 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	NTG2	Q08214	380 aa		5.19	□□□□□ -1.58
SPO11	YHL022C	MRH1	Q12117	320 aa	Predicted RBP	5.19	□□□□□ -1.58
SPO11	YHL022C	ERG6	P25087	383 aa	Known RBP	5.18	□□□□□ -1.58
SPO11	YHL022C	HIR1	P32479	840 aa		5.18	□□□□□ -1.58
SPO11	YHL022C	LYS9	P38999	446 aa		5.18	□□□□□ -1.58
SPO11	YHL022C	RPN7	Q06103	429 aa	Known RBP	5.18	□□□□□ -1.58
SPO11	YHL022C	RGC1	Q06108	1083 aa	Known RBP	5.18	□□□□□ -1.58
SPO11	YHL022C	APL2	P36000	726 aa	Predicted RBP	5.17	□□□□□ -1.58
SPO11	YHL022C	HSL7	P38274	827 aa		5.17	□□□□□ -1.58
SPO11	YHL022C	AIM14	P53109	570 aa		5.17	□□□□□ -1.58
SPO11	YHL022C	ARP4	P80428	489 aa		5.17	□□□□□ -1.58
SPO11	YHL022C	SGO1	Q08490	590 aa		5.17	□□□□□ -1.58
SPO11	YHL022C	MET6	P05694	767 aa	Known RBP	5.16	□□□□□ -1.58
SPO11	YHL022C	PCL2	P25693	308 aa		5.16	□□□□□ -1.58
SPO11	YHL022C	FMO1	P38866	432 aa		5.16	□□□□□ -1.58
SPO11	YHL022C	CCT3	P39077	534 aa	Known RBP	5.16	□□□□□ -1.58
SPO11	YHL022C	TEL2	P53038	688 aa		5.16	□□□□□ -1.58
SPO11	YHL022C	LEE1	Q02799	301 aa	Known RBP	5.16	□□□□□ -1.58
SPO11	YHL022C	POB3	Q04636	552 aa	Known RBP	5.16	□□□□□ -1.58
SPO11	YHL022C	HRP1	Q99383	534 aa	Known RBP	5.16	□□□□□ -1.58
SPO11	YHL022C	HMG1	P12683	1054 aa		5.15	□□□□□ -1.59
SPO11	YHL022C	MVD1	P32377	396 aa	Known RBP	5.15	□□□□□ -1.59
SPO11	YHL022C	YKR018C	P36114	725 aa		5.15	□□□□□ -1.59
SPO11	YHL022C	TRZ1	P36159	838 aa	Predicted RBP	5.15	□□□□□ -1.59
SPO11	YHL022C	CBR1	P38626	284 aa	Known RBP	5.15	□□□□□ -1.59
SPO11	YHL022C	PCL10	P53124	433 aa		5.15	□□□□□ -1.59
SPO11	YHL022C	CTK1	Q03957	528 aa	Known RBP	5.15	□□□□□ -1.59
SPO11	YHL022C	FPR4	Q06205	392 aa	Predicted RBP	5.15	□□□□□ -1.59
SPO11	YHL022C	ATG33	Q06485	197 aa		5.15	□□□□□ -1.59
SPO11	YHL022C	SFB3	P38810	929 aa		5.14	□□□□□ -1.59
SPO11	YHL022C	REV7	P38927	245 aa		5.14	□□□□□ -1.59
SPO11	YHL022C	PAN2	P53010	1115 aa	Predicted RBP	5.14	□□□□□ -1.59
SPO11	YHL022C	SSL2	Q00578	843 aa		5.14	□□□□□ -1.59
SPO11	YHL022C	MCM21	Q06675	368 aa		5.14	□□□□□ -1.59
SPO11	YHL022C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SPO11	YHL022C	SUT2	Q12286	268 aa		5.14	□□□□□ -1.59
SPO11	YHL022C	SIR3	P06701	978 aa		5.13	□□□□□ -1.59
SPO11	YHL022C	SFL1	P20134	766 aa		5.13	□□□□□ -1.59
SPO11	YHL022C	APT2	P36973	181 aa		5.13	□□□□□ -1.59
SPO11	YHL022C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
SPO11	YHL022C	NUP60	P39705	539 aa		5.13	□□□□□ -1.59
SPO11	YHL022C	GET2	P40056	285 aa		5.13	□□□□□ -1.59
SPO11	YHL022C	DOT6	P40059	670 aa	Known RBP	5.13	□□□□□ -1.59
SPO11	YHL022C	RNH70	P53331	553 aa		5.13	□□□□□ -1.59
SPO11	YHL022C	RNR1	P21524	888 aa	Known RBP	5.12	□□□□□ -1.59
SPO11	YHL022C	MNN4	P36044	1178 aa		5.12	□□□□□ -1.59
SPO11	YHL022C	TDP1	P38319	544 aa		5.12	□□□□□ -1.59
SPO11	YHL022C	PCM1	P38628	557 aa	Known RBP	5.12	□□□□□ -1.59
SPO11	YHL022C	ALG12	P53730	551 aa		5.12	□□□□□ -1.59
SPO11	YHL022C	TFB2	Q02939	513 aa		5.12	□□□□□ -1.59
SPO11	YHL022C	HMO1	Q03973	246 aa	Known RBP	5.12	□□□□□ -1.59
SPO11	YHL022C	YLR001C	Q07895	862 aa		5.12	□□□□□ -1.59
SPO11	YHL022C	YKL033W-A	Q86ZR7	236 aa		5.12	□□□□□ -1.59
SPO11	YHL022C	KIN3	P22209	435 aa		5.11	□□□□□ -1.59
SPO11	YHL022C	CCR4	P31384	837 aa	Known RBP	5.11	□□□□□ -1.59
SPO11	YHL022C	YNL195C	P40168	261 aa		5.11	□□□□□ -1.59
SPO11	YHL022C	GID8	P40208	455 aa		5.11	□□□□□ -1.59
SPO11	YHL022C	BRE5	P53741	515 aa	Known RBP	5.11	□□□□□ -1.59
SPO11	YHL022C	SMX3	P54999	86 aa	Predicted RBP	5.11	□□□□□ -1.59
SPO11	YHL022C	GIN4	Q12263	1142 aa		5.11	□□□□□ -1.59
SPO11	YHL022C	PYC1	P11154	1178 aa	Known RBP	5.1	□□□□□ -1.59
SPO11	YHL022C	PPG1	P32838	368 aa		5.1	□□□□□ -1.59
SPO11	YHL022C	YEL1	P34225	687 aa		5.1	□□□□□ -1.59
SPO11	YHL022C	MET13	P53128	600 aa		5.1	□□□□□ -1.59
SPO11	YHL022C	VPS73	P53142	486 aa	Known RBP	5.1	□□□□□ -1.59
SPO11	YHL022C	COX18	P53239	316 aa		5.1	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 126.3 ms