RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C OCA4P25366 362 aa2.4□□□□□ -2.03
UBR1YGR184C SPB1P25582 841 aaPredicted RBP2.4□□□□□ -2.03
UBR1YGR184C SMK1P41808 388 aa2.4□□□□□ -2.03
UBR1YGR184C LSB6P42951 607 aa2.4□□□□□ -2.03
UBR1YGR184C HXT16P47185 567 aa2.4□□□□□ -2.03
UBR1YGR184C NPY1P53164 384 aa2.4□□□□□ -2.03
UBR1YGR184C HOS3Q02959 697 aaKnown RBP2.4□□□□□ -2.03
UBR1YGR184C CSR1Q06705 408 aaKnown RBP2.4□□□□□ -2.03
UBR1YGR184C YOR223WQ12015 292 aa2.4□□□□□ -2.03
UBR1YGR184C NAB2P32505 525 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
UBR1YGR184C VMA8P32610 256 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C YKR075CP36155 307 aa2.39□□□□□ -2.03
UBR1YGR184C NDE1P40215 560 aa2.39□□□□□ -2.03
UBR1YGR184C YIL166CP40445 542 aa2.39□□□□□ -2.03
UBR1YGR184C PRK1P40494 810 aa2.39□□□□□ -2.03
UBR1YGR184C YNR040WP53736 256 aa2.39□□□□□ -2.03
UBR1YGR184C THI21Q08975 551 aa2.39□□□□□ -2.03
UBR1YGR184C YOL114CQ12322 202 aa2.39□□□□□ -2.03
UBR1YGR184C TY1A-DR3Q12441 440 aa2.39□□□□□ -2.03
UBR1YGR184C YBL029C-AQ3E756 94 aa2.39□□□□□ -2.03
UBR1YGR184C SIR1P21691 654 aa2.39□□□□□ -2.03
UBR1YGR184C AMS1P22855 1083 aa2.39□□□□□ -2.03
UBR1YGR184C AFR1P33304 620 aa2.39□□□□□ -2.03
UBR1YGR184C SSZ1P38788 538 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C YDR056CQ12025 205 aa2.39□□□□□ -2.03
UBR1YGR184C SKS1Q12505 502 aa2.39□□□□□ -2.03
UBR1YGR184C PHO3P24031 467 aa2.39□□□□□ -2.03
UBR1YGR184C SWH1P35845 1188 aa2.39□□□□□ -2.03
UBR1YGR184C SHM2P37291 469 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C CIR1P42940 261 aa2.39□□□□□ -2.03
UBR1YGR184C PTK2P47116 818 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C PCL10P53124 433 aa2.39□□□□□ -2.03
UBR1YGR184C SIZ1Q04195 904 aa2.39□□□□□ -2.03
UBR1YGR184C YOR059CQ08448 450 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C ELG1Q12050 791 aa2.39□□□□□ -2.03
UBR1YGR184C FUR1P18562 216 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C CYS3P31373 394 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C HXT6P39003 570 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C HXT7P39004 570 aa2.39□□□□□ -2.03
UBR1YGR184C GID8P40208 455 aa2.39□□□□□ -2.03
UBR1YGR184C KHA1P40309 873 aa2.39□□□□□ -2.03
UBR1YGR184C NEO1P40527 1151 aa2.39□□□□□ -2.03
UBR1YGR184C SRT1Q03175 343 aa2.39□□□□□ -2.03
UBR1YGR184C SRC1Q03707 834 aa2.39□□□□□ -2.03
UBR1YGR184C PUS5Q06244 254 aa2.39□□□□□ -2.03
UBR1YGR184C YLH47Q06493 454 aa2.39□□□□□ -2.03
UBR1YGR184C SNF5P18480 905 aa2.39□□□□□ -2.03
UBR1YGR184C SWC3P31376 625 aa2.39□□□□□ -2.03
UBR1YGR184C CNS1P33313 385 aa2.39□□□□□ -2.03
UBR1YGR184C MAE1P36013 669 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C SPT8P38915 602 aa2.39□□□□□ -2.03
UBR1YGR184C AXL1P40851 1208 aa2.39□□□□□ -2.03
UBR1YGR184C YGR016WP53209 190 aa2.39□□□□□ -2.03
UBR1YGR184C RBG2P53295 368 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C DSE4P53753 1117 aa2.39□□□□□ -2.03
UBR1YGR184C MRPL19P53875 158 aa2.39□□□□□ -2.03
UBR1YGR184C NBA1Q08229 501 aaKnown RBP2.39□□□□□ -2.03
UBR1YGR184C TAH18Q12181 623 aa2.39□□□□□ -2.03
UBR1YGR184C CDC16P09798 840 aa2.38□□□□□ -2.03
UBR1YGR184C NCP1P16603 691 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C HCA4P20448 770 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C FLC2P39719 783 aa2.38□□□□□ -2.03
UBR1YGR184C IRC5P43610 853 aa2.38□□□□□ -2.03
UBR1YGR184C YKU80Q04437 629 aa2.38□□□□□ -2.03
UBR1YGR184C PSK2Q08217 1101 aa2.38□□□□□ -2.03
UBR1YGR184C PFK2P16862 959 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
UBR1YGR184C NPP1P25353 742 aa2.38□□□□□ -2.03
UBR1YGR184C NFS1P25374 497 aa2.38□□□□□ -2.03
UBR1YGR184C BRF1P29056 596 aa2.38□□□□□ -2.03
UBR1YGR184C BCK2P33306 851 aa2.38□□□□□ -2.03
UBR1YGR184C SPO1P53541 631 aa2.38□□□□□ -2.03
UBR1YGR184C YPL191CQ08930 360 aa2.38□□□□□ -2.03
UBR1YGR184C RVB2Q12464 471 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C RNA1P11745 407 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C SEC65P29478 273 aa2.38□□□□□ -2.03
UBR1YGR184C KNS1P32350 737 aaPredicted RBP2.38□□□□□ -2.03
UBR1YGR184C TEF4P36008 412 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C MRPL16P38064 232 aa2.38□□□□□ -2.03
UBR1YGR184C YFL052WP43551 465 aa2.38□□□□□ -2.03
UBR1YGR184C LYS5P50113 272 aa2.38□□□□□ -2.03
UBR1YGR184C ARA2Q04212 335 aa2.38□□□□□ -2.03
UBR1YGR184C HRQ1Q05549 1077 aa2.38□□□□□ -2.03
UBR1YGR184C TFC6Q06339 672 aa2.38□□□□□ -2.03
UBR1YGR184C PHO5P00635 467 aa2.38□□□□□ -2.03
UBR1YGR184C HSF1P10961 833 aa2.38□□□□□ -2.03
UBR1YGR184C PMS1P14242 873 aa2.38□□□□□ -2.03
UBR1YGR184C CKA1P15790 372 aa2.38□□□□□ -2.03
UBR1YGR184C OLE1P21147 510 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C DIT1P21623 536 aa2.38□□□□□ -2.03
UBR1YGR184C PRE8P23639 250 aa2.38□□□□□ -2.03
UBR1YGR184C CWH43P25618 953 aa2.38□□□□□ -2.03
UBR1YGR184C UIP5P36137 443 aa2.38□□□□□ -2.03
UBR1YGR184C FYV8P46949 817 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C SET2P46995 733 aaKnown RBP2.38□□□□□ -2.03
UBR1YGR184C VID22Q05934 901 aa2.38□□□□□ -2.03
UBR1YGR184C DBF4P32325 704 aa2.37□□□□□ -2.03
UBR1YGR184C APT2P36973 181 aa2.37□□□□□ -2.03
UBR1YGR184C MXR1P40029 184 aa2.37□□□□□ -2.03
UBR1YGR184C YIL092WP40497 633 aa2.37□□□□□ -2.03
UBR1YGR184C RPN7Q06103 429 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms