RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W PHO5P00635 467 aa2.59□□□□□ -1.99
CBF2YGR140W CYS3P31373 394 aaKnown RBP2.59□□□□□ -1.99
CBF2YGR140W CNS1P33313 385 aa2.59□□□□□ -1.99
CBF2YGR140W LRS4Q04087 347 aaKnown RBP2.59□□□□□ -1.99
CBF2YGR140W SGD1Q06132 899 aa2.59□□□□□ -1.99
CBF2YGR140W RRG1Q12167 365 aaPredicted RBP2.59□□□□□ -1.99
CBF2YGR140W SES1P07284 462 aaKnown RBP2.59□□□□□ -2
CBF2YGR140W HOM3P10869 527 aa2.59□□□□□ -2
CBF2YGR140W DIT1P21623 536 aa2.59□□□□□ -2
CBF2YGR140W VPH1P32563 840 aaKnown RBP2.59□□□□□ -2
CBF2YGR140W TEF4P36008 412 aaKnown RBP2.59□□□□□ -2
CBF2YGR140W YKR051WP36142 418 aa2.59□□□□□ -2
CBF2YGR140W BCD1P38772 366 aa2.59□□□□□ -2
CBF2YGR140W STL1P39932 569 aa2.59□□□□□ -2
CBF2YGR140W ENV11P53246 860 aa2.59□□□□□ -2
CBF2YGR140W SRT1Q03175 343 aa2.59□□□□□ -2
CBF2YGR140W YMR210WQ03649 449 aa2.59□□□□□ -2
CBF2YGR140W TY1A-DR2Q03964 440 aaKnown RBP2.59□□□□□ -2
CBF2YGR140W DCS2Q12123 353 aa2.59□□□□□ -2
CBF2YGR140W YOR022CQ12204 715 aa2.59□□□□□ -2
CBF2YGR140W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
CBF2YGR140W NOT3P06102 836 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W HOP1P20050 605 aa2.58□□□□□ -2
CBF2YGR140W CMK1P27466 446 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W SMY2P32909 740 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W TGL1P34163 548 aa2.58□□□□□ -2
CBF2YGR140W NMD3P38861 518 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W HXT6P39003 570 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W HXT7P39004 570 aa2.58□□□□□ -2
CBF2YGR140W CEM1P39525 442 aa2.58□□□□□ -2
CBF2YGR140W AIR1P40507 360 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W VID28P40547 921 aa2.58□□□□□ -2
CBF2YGR140W GPD2P41911 440 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W PCL10P53124 433 aa2.58□□□□□ -2
CBF2YGR140W SCW11P53189 542 aa2.58□□□□□ -2
CBF2YGR140W CBK1P53894 756 aa2.58□□□□□ -2
CBF2YGR140W CEG1Q01159 459 aaPredicted RBP2.58□□□□□ -2
CBF2YGR140W EIS1Q05050 843 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W SLP1Q12232 587 aa2.58□□□□□ -2
CBF2YGR140W SCM3Q12334 223 aa2.58□□□□□ -2
CBF2YGR140W LEU2P04173 364 aaPredicted RBP2.58□□□□□ -2
CBF2YGR140W GFA1P14742 717 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W AAC3P18238 307 aa2.58□□□□□ -2
CBF2YGR140W YCL002CP25565 263 aa2.58□□□□□ -2
CBF2YGR140W MUD2P36084 527 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W MSC7P38694 644 aa2.58□□□□□ -2
CBF2YGR140W GIC1P38785 314 aa2.58□□□□□ -2
CBF2YGR140W APE4P38821 490 aa2.58□□□□□ -2
CBF2YGR140W SCS2P40075 244 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W ARF3P40994 183 aaRIP-Chip data2.58□□□□□ -2 RIP-Chip
CBF2YGR140W BRE2P43132 505 aa2.58□□□□□ -2
CBF2YGR140W MAD3P47074 515 aa2.58□□□□□ -2
CBF2YGR140W SFB2P53953 876 aa2.58□□□□□ -2
CBF2YGR140W ADE12P80210 433 aaKnown RBP2.58□□□□□ -2
CBF2YGR140W SYF1Q04048 859 aaPredicted RBP2.58□□□□□ -2
CBF2YGR140W DPH6Q12429 685 aa2.58□□□□□ -2
CBF2YGR140W PCK1P10963 549 aa2.57□□□□□ -2
CBF2YGR140W RED1P14291 827 aa2.57□□□□□ -2
CBF2YGR140W ERS1P17261 260 aa2.57□□□□□ -2
CBF2YGR140W CLB4P24871 460 aa2.57□□□□□ -2
CBF2YGR140W YCL049CP25577 312 aa2.57□□□□□ -2
CBF2YGR140W YSC84P32793 468 aa2.57□□□□□ -2
CBF2YGR140W TYE7P33122 291 aaPredicted RBP2.57□□□□□ -2
CBF2YGR140W SAS3P34218 831 aa2.57□□□□□ -2
CBF2YGR140W ALG14P38242 237 aa2.57□□□□□ -2
CBF2YGR140W NOP16P40007 231 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W UBP7P40453 1071 aa2.57□□□□□ -2
CBF2YGR140W RRT14P40470 206 aa2.57□□□□□ -2
CBF2YGR140W VHR1P40522 640 aa2.57□□□□□ -2
CBF2YGR140W BNA1P47096 177 aa2.57□□□□□ -2
CBF2YGR140W ATP22P50273 684 aaPredicted RBP2.57□□□□□ -2
CBF2YGR140W RPT6Q01939 405 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W MTD1Q02046 320 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W SDH5Q08230 162 aa2.57□□□□□ -2
CBF2YGR140W SFI1Q12369 946 aa2.57□□□□□ -2
CBF2YGR140W SMC6Q12749 1114 aa2.57□□□□□ -2
CBF2YGR140W HSP82P02829 709 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W KNS1P32350 737 aaPredicted RBP2.57□□□□□ -2
CBF2YGR140W ANP1P32629 500 aa2.57□□□□□ -2
CBF2YGR140W LRG1P35688 1017 aa2.57□□□□□ -2
CBF2YGR140W YKL151CP36059 337 aa2.57□□□□□ -2
CBF2YGR140W YKR018CP36114 725 aa2.57□□□□□ -2
CBF2YGR140W SHM2P37291 469 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W FLR1P38124 548 aa2.57□□□□□ -2
CBF2YGR140W FAT1P38225 669 aa2.57□□□□□ -2
CBF2YGR140W SRP68P38687 599 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W OSH7P38755 437 aa2.57□□□□□ -2
CBF2YGR140W PIK1P39104 1066 aa2.57□□□□□ -2
CBF2YGR140W EAF5P39995 279 aa2.57□□□□□ -2
CBF2YGR140W CIR1P42940 261 aa2.57□□□□□ -2
CBF2YGR140W BTN2P53286 410 aa2.57□□□□□ -2
CBF2YGR140W SQS1P53866 767 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W MOT3P54785 490 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W ORC4P54791 529 aa2.57□□□□□ -2
CBF2YGR140W ARA2Q04212 335 aa2.57□□□□□ -2
CBF2YGR140W VID22Q05934 901 aa2.57□□□□□ -2
CBF2YGR140W CSR1Q06705 408 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W NGL1Q08213 363 aaKnown RBP2.57□□□□□ -2
CBF2YGR140W PSK2Q08217 1101 aa2.57□□□□□ -2
CBF2YGR140W SKM1Q12469 655 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms