RNA–Protein interactions for RNA: YGR049W

SCM4, Transcript of Mitochondrial outer membrane protein of unknown function, yeast

Gene SCM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCM4	YGR049W	SUL1	P38359	859 aa		4.68	□□□□□ -1.66
SCM4	YGR049W	PCM1	P38628	557 aa	Known RBP	4.68	□□□□□ -1.66
SCM4	YGR049W	RPN10	P38886	268 aa	Known RBP	4.68	□□□□□ -1.66
SCM4	YGR049W	YFL052W	P43551	465 aa		4.68	□□□□□ -1.66
SCM4	YGR049W	NRG1	Q03125	231 aa		4.68	□□□□□ -1.66
SCM4	YGR049W	SPA2	P23201	1466 aa	Known RBP	4.68	□□□□□ -1.66
SCM4	YGR049W	YBR053C	P38235	358 aa		4.67	□□□□□ -1.66
SCM4	YGR049W	SIC1	P38634	284 aa		4.67	□□□□□ -1.66
SCM4	YGR049W	ELO3	P40319	345 aa		4.67	□□□□□ -1.66
SCM4	YGR049W	YMR206W	Q03695	313 aa		4.67	□□□□□ -1.66
SCM4	YGR049W	RPN7	Q06103	429 aa	Known RBP	4.67	□□□□□ -1.66
SCM4	YGR049W	RGC1	Q06108	1083 aa	Known RBP	4.67	□□□□□ -1.66
SCM4	YGR049W	YOL073C	Q08232	322 aa		4.67	□□□□□ -1.66
SCM4	YGR049W	ALG7	P07286	448 aa		4.65	□□□□□ -1.67
SCM4	YGR049W	ADE2	P21264	571 aa	Known RBP	4.65	□□□□□ -1.67
SCM4	YGR049W	ERG6	P25087	383 aa	Known RBP	4.65	□□□□□ -1.67
SCM4	YGR049W	CCR4	P31384	837 aa	Known RBP	4.65	□□□□□ -1.67
SCM4	YGR049W	HSL7	P38274	827 aa		4.65	□□□□□ -1.67
SCM4	YGR049W	TEX1	P53851	422 aa	Known RBP	4.65	□□□□□ -1.67
SCM4	YGR049W	MUK1	Q02866	612 aa		4.65	□□□□□ -1.67
SCM4	YGR049W	FRE5	Q08908	694 aa		4.65	□□□□□ -1.67
SCM4	YGR049W	GIN4	Q12263	1142 aa		4.65	□□□□□ -1.67
SCM4	YGR049W	CAF20	P12962	161 aa	Known RBP	4.64	□□□□□ -1.67
SCM4	YGR049W	MNN4	P36044	1178 aa		4.64	□□□□□ -1.67
SCM4	YGR049W	KTR4	P38131	464 aa		4.64	□□□□□ -1.67
SCM4	YGR049W	YHR112C	P38716	378 aa		4.64	□□□□□ -1.67
SCM4	YGR049W	MIP6	P38760	659 aa	Known RBP	4.64	□□□□□ -1.67
SCM4	YGR049W	PRP31	P49704	494 aa	Predicted RBP	4.64	□□□□□ -1.67
SCM4	YGR049W	DLT1	Q04216	342 aa		4.64	□□□□□ -1.67
SCM4	YGR049W	MET3	P08536	511 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	SPC42	P36094	363 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	PPS1	P38148	807 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	DOT6	P40059	670 aa	Known RBP	4.63	□□□□□ -1.67
SCM4	YGR049W	MGS1	P40151	587 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	HOS4	P40480	1083 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	PCL10	P53124	433 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	SDA1	P53313	767 aa	Known RBP	4.63	□□□□□ -1.67
SCM4	YGR049W	IRC13	Q08630	104 aa		4.63	□□□□□ -1.67
SCM4	YGR049W	PPR1	P07272	904 aa	Predicted RBP	4.62	□□□□□ -1.67
SCM4	YGR049W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SCM4	YGR049W	SFP1	P32432	683 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	NGG1	P32494	702 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	YEL1	P34225	687 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	YKR018C	P36114	725 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	BRN1	P38170	754 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	LYS9	P38999	446 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	YNL195C	P40168	261 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	MTL1	P53214	551 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	BRE5	P53741	515 aa	Known RBP	4.62	□□□□□ -1.67
SCM4	YGR049W	RNT1	Q02555	471 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	YML122C	Q03207	126 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	DCS2	Q12123	353 aa		4.62	□□□□□ -1.67
SCM4	YGR049W	YBR259W	P38338	688 aa		4.61	□□□□□ -1.67
SCM4	YGR049W	FPR3	P38911	411 aa	Known RBP	4.61	□□□□□ -1.67
SCM4	YGR049W	YJL163C	P46996	555 aa		4.61	□□□□□ -1.67
SCM4	YGR049W	ORC4	P54791	529 aa		4.61	□□□□□ -1.67
SCM4	YGR049W	ARG5,6	Q01217	863 aa		4.61	□□□□□ -1.67
SCM4	YGR049W	ADY4	Q05955	493 aa		4.61	□□□□□ -1.67
SCM4	YGR049W	GUD1	Q07729	489 aa		4.61	□□□□□ -1.67
SCM4	YGR049W	HRP1	Q99383	534 aa	Known RBP	4.61	□□□□□ -1.67
SCM4	YGR049W	BCD1	P38772	366 aa		4.6	□□□□□ -1.67
SCM4	YGR049W	YIR042C	P40586	236 aa		4.6	□□□□□ -1.67
SCM4	YGR049W	YJR096W	P47137	282 aa		4.6	□□□□□ -1.67
SCM4	YGR049W	HLJ1	P48353	224 aa		4.6	□□□□□ -1.67
SCM4	YGR049W	THI73	Q07904	523 aa		4.6	□□□□□ -1.67
SCM4	YGR049W	SGS1	P35187	1447 aa		4.6	□□□□□ -1.67
SCM4	YGR049W	LAT1	P12695	482 aa	Known RBP	4.59	□□□□□ -1.67
SCM4	YGR049W	OAR1	P35731	278 aa		4.59	□□□□□ -1.67
SCM4	YGR049W	GET2	P40056	285 aa		4.59	□□□□□ -1.67
SCM4	YGR049W	STB4	P50104	949 aa		4.59	□□□□□ -1.67
SCM4	YGR049W	GPG1	P53130	126 aa		4.59	□□□□□ -1.67
SCM4	YGR049W	YBP2	P53169	641 aa		4.59	□□□□□ -1.67
SCM4	YGR049W	YNR029C	P53729	429 aa	Known RBP	4.59	□□□□□ -1.67
SCM4	YGR049W	GAD1	Q04792	585 aa		4.59	□□□□□ -1.67
SCM4	YGR049W	HIS7	P33734	552 aa	Known RBP	4.58	□□□□□ -1.68
SCM4	YGR049W	APL2	P36000	726 aa	Predicted RBP	4.58	□□□□□ -1.68
SCM4	YGR049W	TYS1	P36421	394 aa	Known RBP	4.58	□□□□□ -1.68
SCM4	YGR049W	MOH1	P38191	138 aa		4.58	□□□□□ -1.68
SCM4	YGR049W	FMO1	P38866	432 aa		4.58	□□□□□ -1.68
SCM4	YGR049W	NUG1	P40010	520 aa	Known RBP	4.58	□□□□□ -1.68
SCM4	YGR049W	COG8	Q04632	607 aa		4.58	□□□□□ -1.68
SCM4	YGR049W	YGR161W-C	Q3E744	92 aa		4.58	□□□□□ -1.68
SCM4	YGR049W	ECM3	Q99252	613 aa		4.58	□□□□□ -1.68
SCM4	YGR049W	PRP19	P32523	503 aa	Known RBP	4.57	□□□□□ -1.68
SCM4	YGR049W	SSZ1	P38788	538 aa	Known RBP	4.57	□□□□□ -1.68
SCM4	YGR049W	CRP1	P38845	465 aa	Known RBP	4.57	□□□□□ -1.68
SCM4	YGR049W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SCM4	YGR049W	BAP3	P41815	604 aa		4.57	□□□□□ -1.68
SCM4	YGR049W	AMA1	P50082	593 aa		4.57	□□□□□ -1.68
SCM4	YGR049W	RNR1	P21524	888 aa	Known RBP	4.56	□□□□□ -1.68
SCM4	YGR049W	HIR1	P32479	840 aa		4.56	□□□□□ -1.68
SCM4	YGR049W	AKL1	P38080	1108 aa	Known RBP	4.56	□□□□□ -1.68
SCM4	YGR049W	ECM1	P39715	212 aa		4.56	□□□□□ -1.68
SCM4	YGR049W	GID8	P40208	455 aa		4.56	□□□□□ -1.68
SCM4	YGR049W	YJR039W	P47107	1121 aa		4.56	□□□□□ -1.68
SCM4	YGR049W	UBC11	P52492	156 aa		4.56	□□□□□ -1.68
SCM4	YGR049W	YGL081W	P53156	320 aa		4.56	□□□□□ -1.68
SCM4	YGR049W	MTQ2	Q03920	221 aa	Predicted RBP	4.56	□□□□□ -1.68
SCM4	YGR049W	HMO1	Q03973	246 aa	Known RBP	4.56	□□□□□ -1.68
SCM4	YGR049W	UTP14	Q04500	899 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms