RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YVC1Q12324 675 aa5.92□□□□□ -1.46
SPT3YDR392W NFS1P25374 497 aa5.91□□□□□ -1.46
SPT3YDR392W PET127P32606 800 aa5.91□□□□□ -1.46
SPT3YDR392W YGR045CP53229 120 aa5.91□□□□□ -1.46
SPT3YDR392W SSY1Q03770 852 aa5.91□□□□□ -1.46
SPT3YDR392W CET1O13297 549 aaPredicted RBP5.9□□□□□ -1.46
SPT3YDR392W HMG2P12684 1045 aa5.9□□□□□ -1.46
SPT3YDR392W MCM5P29496 775 aaKnown RBP5.9□□□□□ -1.46
SPT3YDR392W YKL077WP36081 392 aa5.9□□□□□ -1.46
SPT3YDR392W UTH1P36135 365 aa5.9□□□□□ -1.46
SPT3YDR392W MRPL7P36519 292 aa5.9□□□□□ -1.46
SPT3YDR392W YBR238CP38330 731 aaKnown RBP5.9□□□□□ -1.46
SPT3YDR392W UME6P39001 836 aa5.9□□□□□ -1.46
SPT3YDR392W PEX7P39108 375 aa5.9□□□□□ -1.46
SPT3YDR392W POL32P47110 350 aa5.9□□□□□ -1.46
SPT3YDR392W YBR056W-AI2HB52 66 aa5.89□□□□□ -1.47
SPT3YDR392W YCR015CP25616 317 aa5.89□□□□□ -1.47
SPT3YDR392W SHU2P38957 223 aa5.89□□□□□ -1.47
SPT3YDR392W ELA1P53861 379 aaPredicted RBP5.89□□□□□ -1.47
SPT3YDR392W CDC53Q12018 815 aaKnown RBP5.89□□□□□ -1.47
SPT3YDR392W PNS1Q12412 539 aa5.89□□□□□ -1.47
SPT3YDR392W TRL1P09880 827 aaKnown RBP5.88□□□□□ -1.47
SPT3YDR392W HSF1P10961 833 aa5.88□□□□□ -1.47
SPT3YDR392W SEC21P32074 935 aaKnown RBP5.88□□□□□ -1.47
SPT3YDR392W TSA1P34760 196 aaKnown RBP5.88□□□□□ -1.47
SPT3YDR392W REG2P38232 338 aa5.88□□□□□ -1.47
SPT3YDR392W PIP2P52960 996 aa5.88□□□□□ -1.47
SPT3YDR392W NSE5Q03718 556 aa5.88□□□□□ -1.47
SPT3YDR392W DUS3Q06053 668 aaKnown RBP5.88□□□□□ -1.47
SPT3YDR392W CDA2Q06703 312 aa5.88□□□□□ -1.47
SPT3YDR392W PRO1P32264 428 aa5.87□□□□□ -1.47
SPT3YDR392W CYM1P32898 989 aa5.87□□□□□ -1.47
SPT3YDR392W PHO88P38264 188 aaPredicted RBP5.87□□□□□ -1.47
SPT3YDR392W YIR042CP40586 236 aa5.87□□□□□ -1.47
SPT3YDR392W JIP5Q06214 492 aaPredicted RBP5.87□□□□□ -1.47
SPT3YDR392W ESC8Q08119 714 aa5.87□□□□□ -1.47
SPT3YDR392W KEL3Q08979 651 aaPredicted RBP5.87□□□□□ -1.47
SPT3YDR392W MDN1Q12019 4910 aaKnown RBP5.86□□□□□ -1.47
SPT3YDR392W MCR1P36060 302 aaKnown RBP5.86□□□□□ -1.47
SPT3YDR392W PCA1P38360 1216 aa5.86□□□□□ -1.47
SPT3YDR392W RFC1P38630 861 aaKnown RBP5.86□□□□□ -1.47
SPT3YDR392W GIP4P39732 760 aa5.86□□□□□ -1.47
SPT3YDR392W SPH1Q06160 661 aa5.86□□□□□ -1.47
SPT3YDR392W TY1A-LR4P0C2I8 440 aaKnown RBP5.85□□□□□ -1.47
SPT3YDR392W TY1A-DR6P0CX70 440 aa5.85□□□□□ -1.47
SPT3YDR392W TY1A-ER1P0CX71 440 aa5.85□□□□□ -1.47
SPT3YDR392W TY1A-LR2P0CX72 440 aa5.85□□□□□ -1.47
SPT3YDR392W TY1A-PLP0CX73 440 aa5.85□□□□□ -1.47
SPT3YDR392W TY1A-JR1P0CX74 440 aa5.85□□□□□ -1.47
SPT3YDR392W TY1A-LR3P0CX75 440 aa5.85□□□□□ -1.47
SPT3YDR392W TY1A-ML2P0CX76 440 aa5.85□□□□□ -1.47
SPT3YDR392W PRE8P23639 250 aa5.85□□□□□ -1.47
SPT3YDR392W YCL042WP25572 119 aa5.85□□□□□ -1.47
SPT3YDR392W TFB1P32776 642 aa5.85□□□□□ -1.47
SPT3YDR392W TGL1P34163 548 aa5.85□□□□□ -1.47
SPT3YDR392W CTR1P49573 406 aa5.85□□□□□ -1.47
SPT3YDR392W SAM37P50110 327 aa5.85□□□□□ -1.47
SPT3YDR392W NOC3Q07896 663 aaPredicted RBP5.85□□□□□ -1.47
SPT3YDR392W TY1A-GR1Q12085 440 aa5.85□□□□□ -1.47
SPT3YDR392W LPX1Q12405 387 aaKnown RBP5.85□□□□□ -1.47
SPT3YDR392W SNU66Q12420 587 aaPredicted RBP5.85□□□□□ -1.47
SPT3YDR392W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.85□□□□□ -1.47
SPT3YDR392W TY1A-OLQ92392 440 aaKnown RBP5.85□□□□□ -1.47
SPT3YDR392W MPD2Q99316 277 aa5.85□□□□□ -1.47
SPT3YDR392W PTC7P38797 343 aa5.84□□□□□ -1.47
SPT3YDR392W YJR008WP47085 338 aa5.84□□□□□ -1.47
SPT3YDR392W POL2P21951 2222 aaKnown RBP5.84□□□□□ -1.47
SPT3YDR392W BI4P03879 638 aa5.83□□□□□ -1.48
SPT3YDR392W CDC3P32457 520 aaKnown RBP5.83□□□□□ -1.48
SPT3YDR392W EXO5P38289 585 aa5.83□□□□□ -1.48
SPT3YDR392W GYP8P43570 497 aa5.83□□□□□ -1.48
SPT3YDR392W RPS7BP48164 190 aaKnown RBP5.83□□□□□ -1.48
SPT3YDR392W MON1P53129 644 aa5.83□□□□□ -1.48
SPT3YDR392W LIF1P53150 421 aa5.83□□□□□ -1.48
SPT3YDR392W YNL050CP53952 270 aa5.83□□□□□ -1.48
SPT3YDR392W INM2Q05533 292 aa5.83□□□□□ -1.48
SPT3YDR392W PUS7Q08647 676 aaKnown RBP5.83□□□□□ -1.48
SPT3YDR392W OSH2Q12451 1283 aa5.83□□□□□ -1.48
SPT3YDR392W RIP1P08067 215 aa5.82□□□□□ -1.48
SPT3YDR392W PRP6P19735 899 aaPredicted RBP5.82□□□□□ -1.48
SPT3YDR392W THI80P35202 319 aa5.82□□□□□ -1.48
SPT3YDR392W TCD2P36101 447 aaKnown RBP5.82□□□□□ -1.48
SPT3YDR392W MDJ2P42834 146 aa5.82□□□□□ -1.48
SPT3YDR392W SLS1P42900 643 aa5.82□□□□□ -1.48
SPT3YDR392W GCV2P49095 1034 aa5.82□□□□□ -1.48
SPT3YDR392W TMA64Q04600 565 aaKnown RBP5.82□□□□□ -1.48
SPT3YDR392W YCS4Q06156 1176 aa5.82□□□□□ -1.48
SPT3YDR392W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
SPT3YDR392W YLL058WQ12198 575 aa5.82□□□□□ -1.48
SPT3YDR392W SUL2Q12325 893 aa5.82□□□□□ -1.48
SPT3YDR392W COQ4O13525 335 aa5.81□□□□□ -1.48
SPT3YDR392W SPE1P08432 466 aa5.81□□□□□ -1.48
SPT3YDR392W SRM1P21827 482 aa5.81□□□□□ -1.48
SPT3YDR392W MSS51P32335 436 aa5.81□□□□□ -1.48
SPT3YDR392W CSE1P33307 960 aa5.81□□□□□ -1.48
SPT3YDR392W BUD2P33314 1104 aa5.81□□□□□ -1.48
SPT3YDR392W NUP133P36161 1157 aa5.81□□□□□ -1.48
SPT3YDR392W ESL1P40456 1118 aa5.81□□□□□ -1.48
SPT3YDR392W GTS1P40956 396 aa5.81□□□□□ -1.48
SPT3YDR392W NOG1Q02892 647 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 182.7 ms