RNA–Protein interactions for RNA: YDR371W

CTS2, Transcript of Putative chitinase, yeast

Gene CTS2, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTS2	YDR371W	LSO1	Q3E827	93 aa		5.85	□□□□□ -1.47
CTS2	YDR371W	AI1	P03875	834 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	RPC31	P17890	251 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	RET1	P22276	1149 aa	Known RBP	5.84	□□□□□ -1.47
CTS2	YDR371W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
CTS2	YDR371W	MDJ1	P35191	511 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	KTR4	P38131	464 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	REI1	P38344	393 aa	Predicted RBP	5.84	□□□□□ -1.47
CTS2	YDR371W	UTP18	P40362	594 aa	Predicted RBP	5.84	□□□□□ -1.47
CTS2	YDR371W	YJL055W	P47044	245 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	MDE1	P47095	244 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	SKP1	P52286	194 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	PBP1	P53297	722 aa	Known RBP	5.84	□□□□□ -1.47
CTS2	YDR371W	SNP1	Q00916	300 aa	Predicted RBP	5.84	□□□□□ -1.47
CTS2	YDR371W	TY1A-DR2	Q03964	440 aa	Known RBP	5.84	□□□□□ -1.47
CTS2	YDR371W	ARP9	Q05123	467 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	FKS3	Q04952	1785 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	RAD9	P14737	1309 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	POM152	P39685	1337 aa		5.84	□□□□□ -1.47
CTS2	YDR371W	RPP1A	P05318	106 aa	Predicted RBP	5.84	□□□□□ -1.48
CTS2	YDR371W	SAN1	P22470	610 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	KCC4	P25389	1037 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	DBF4	P32325	704 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	RPN2	P32565	945 aa	Known RBP	5.84	□□□□□ -1.48
CTS2	YDR371W	MIC60	P36112	540 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	TAF5	P38129	798 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	YBL028C	P38202	106 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	CTM1	P38818	585 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	GPP2	P40106	250 aa	Known RBP	5.84	□□□□□ -1.48
CTS2	YDR371W	YFL066C	P43538	392 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	SPO74	P45819	413 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	FOL2	P51601	243 aa	Known RBP	5.84	□□□□□ -1.48
CTS2	YDR371W	NUP84	P52891	726 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	NSG2	P53898	299 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	TIM50	Q02776	476 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	HOT1	Q03213	719 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	YKU80	Q04437	629 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	HFD1	Q04458	532 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	MLH2	Q07980	695 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	CUE5	Q08412	411 aa	Known RBP	5.84	□□□□□ -1.48
CTS2	YDR371W	GLE1	Q12315	538 aa		5.84	□□□□□ -1.48
CTS2	YDR371W	GPM1	P00950	247 aa	Known RBP	5.83	□□□□□ -1.48
CTS2	YDR371W	HMG1	P12683	1054 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	PHO81	P17442	1178 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	SNF2	P22082	1703 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	CDC48	P25694	835 aa	Known RBP	5.83	□□□□□ -1.48
CTS2	YDR371W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
CTS2	YDR371W	BAP2	P38084	609 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	SWD1	P39706	426 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	ACA1	P39970	489 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	ENT3	P47160	408 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	EFM5	P53200	248 aa	Known RBP	5.83	□□□□□ -1.48
CTS2	YDR371W	YGR053C	P53234	283 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	RBG2	P53295	368 aa	Known RBP	5.83	□□□□□ -1.48
CTS2	YDR371W	YNR040W	P53736	256 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	MRPL19	P53875	158 aa		5.83	□□□□□ -1.48
CTS2	YDR371W	HAS1	Q03532	505 aa	Known RBP	5.83	□□□□□ -1.48
CTS2	YDR371W	PRP42	Q03776	544 aa	Known RBP	5.83	□□□□□ -1.48
CTS2	YDR371W	RPC53	P25441	422 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	RER1	P25560	188 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	RSC6	P25632	483 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	RPL8B	P29453	256 aa	Known RBP	5.82	□□□□□ -1.48
CTS2	YDR371W	DEP1	P31385	405 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	EFB1	P32471	206 aa	Known RBP	5.82	□□□□□ -1.48
CTS2	YDR371W	PET309	P32522	965 aa	Predicted RBP	5.82	□□□□□ -1.48
CTS2	YDR371W	COY1	P34237	679 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	LDH1	P38139	375 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	NCL1	P38205	684 aa	Known RBP	5.82	□□□□□ -1.48
CTS2	YDR371W	YBR184W	P38299	523 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	APM2	P38700	605 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	DYS1	P38791	387 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	SDS3	P40505	327 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	HIS6	P40545	261 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	AXL1	P40851	1208 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	UFD2	P54860	961 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	RRN5	Q02983	363 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	FDC1	Q03034	503 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	SYF1	Q04048	859 aa	Predicted RBP	5.82	□□□□□ -1.48
CTS2	YDR371W	TAF11	Q04226	346 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	ADE13	Q05911	482 aa	Known RBP	5.82	□□□□□ -1.48
CTS2	YDR371W	THI72	Q08579	599 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	APL4	Q12028	832 aa		5.82	□□□□□ -1.48
CTS2	YDR371W	GCD1	P09032	578 aa	Predicted RBP	5.81	□□□□□ -1.48
CTS2	YDR371W	BEM3	P32873	1128 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	HSV2	P50079	448 aa	Predicted RBP	5.81	□□□□□ -1.48
CTS2	YDR371W	GUP1	P53154	560 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	NPY1	P53164	384 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	ERP6	P53198	216 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	TRS130	Q03660	1102 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	TDA9	Q04545	1251 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	GSF2	Q04697	403 aa	Known RBP	5.81	□□□□□ -1.48
CTS2	YDR371W	MCP2	Q06567	569 aa		5.81	□□□□□ -1.48
CTS2	YDR371W	PDC5	P16467	563 aa	Known RBP	5.8	□□□□□ -1.48
CTS2	YDR371W	BAS1	P22035	811 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	LCB1	P25045	558 aa	Known RBP	5.8	□□□□□ -1.48
CTS2	YDR371W	ARE1	P25628	610 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	NAM7	P30771	971 aa	Known RBP	5.8	□□□□□ -1.48
CTS2	YDR371W	BSD2	P38356	321 aa		5.8	□□□□□ -1.48
CTS2	YDR371W	RFC1	P38630	861 aa	Known RBP	5.8	□□□□□ -1.48
CTS2	YDR371W	ZIM17	P42844	174 aa		5.8	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 112.1 ms