RNA–Protein interactions for RNA: YDR339C

FCF1, Transcript of Putative PINc domain nuclease, yeast

Gene FCF1, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FCF1	YDR339C	CAB3	P36076	571 aa		4.58	□□□□□ -1.68
FCF1	YDR339C	TRZ1	P36159	838 aa	Predicted RBP	4.58	□□□□□ -1.68
FCF1	YDR339C	MGS1	P40151	587 aa		4.58	□□□□□ -1.68
FCF1	YDR339C	CCM1	P48237	864 aa	Predicted RBP	4.58	□□□□□ -1.68
FCF1	YDR339C	MRPS35	P53292	345 aa		4.58	□□□□□ -1.68
FCF1	YDR339C	YLR001C	Q07895	862 aa		4.58	□□□□□ -1.68
FCF1	YDR339C	BUD21	Q08492	214 aa	Predicted RBP	4.58	□□□□□ -1.68
FCF1	YDR339C	HIR3	P47171	1648 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	REV3	P14284	1504 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	TOP3	P13099	656 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	RFA1	P22336	621 aa	Known RBP	4.57	□□□□□ -1.68
FCF1	YDR339C	VBA3	P25594	458 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	PEX2	P32800	271 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	YBR284W	P38150	797 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	FKH2	P41813	862 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	DAS1	P47005	663 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	DAM1	P53267	343 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	HDA1	P53973	706 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	VPS30	Q02948	557 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	NYV1	Q12255	253 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	SWM1	Q12379	170 aa		4.57	□□□□□ -1.68
FCF1	YDR339C	THO2	P53552	1597 aa	Known RBP	4.57	□□□□□ -1.68
FCF1	YDR339C	SIN3	P22579	1536 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	STU1	P38198	1513 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
FCF1	YDR339C	PRP4	P20053	465 aa	Known RBP	4.56	□□□□□ -1.68
FCF1	YDR339C	MEF1	P25039	761 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	SPC29	P33419	253 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	STO1	P34160	861 aa	Known RBP	4.56	□□□□□ -1.68
FCF1	YDR339C	TYS1	P36421	394 aa	Known RBP	4.56	□□□□□ -1.68
FCF1	YDR339C	YBR071W	P38243	211 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	ELO3	P40319	345 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	SDS3	P40505	327 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	NIT3	P49954	291 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	DLT1	Q04216	342 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	MRH1	Q12117	320 aa	Predicted RBP	4.56	□□□□□ -1.68
FCF1	YDR339C	YPR071W	Q12346	211 aa		4.56	□□□□□ -1.68
FCF1	YDR339C	SRD1	P09007	221 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	TYE7	P33122	291 aa	Predicted RBP	4.55	□□□□□ -1.68
FCF1	YDR339C	REC104	P33323	182 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	CTF8	P38877	133 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	PEA2	P40091	420 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	TOK1	P40310	691 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	YRB30	P53107	440 aa	Predicted RBP	4.55	□□□□□ -1.68
FCF1	YDR339C	PEX14	P53112	341 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	PAP2	P53632	584 aa	Known RBP	4.55	□□□□□ -1.68
FCF1	YDR339C	YKR011C	Q02209	353 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	YOR378W	Q08902	515 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	SUT2	Q12286	268 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	TRM11	Q12463	433 aa		4.55	□□□□□ -1.68
FCF1	YDR339C	MET3	P08536	511 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	RPP1	P38786	293 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	CAF16	P43569	289 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	DUG1	P43616	481 aa	Known RBP	4.54	□□□□□ -1.68
FCF1	YDR339C	MUP1	P50276	574 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	GPG1	P53130	126 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	ATP25	Q03153	612 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	BUL2	Q03758	920 aa	Known RBP	4.54	□□□□□ -1.68
FCF1	YDR339C	ATG16	Q03818	150 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	REH1	Q06709	432 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	YDL121C	Q07541	149 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	HBT1	Q07653	1046 aa	Known RBP	4.54	□□□□□ -1.68
FCF1	YDR339C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
FCF1	YDR339C	POL1	P13382	1468 aa		4.54	□□□□□ -1.68
FCF1	YDR339C	STH1	P32597	1359 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	CDC9	P04819	755 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	CAF20	P12962	161 aa	Known RBP	4.53	□□□□□ -1.68
FCF1	YDR339C	AEP2	P22136	580 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	EUG1	P32474	517 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	MTC2	P34246	357 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	EMC3	P36039	253 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	GPP1	P41277	250 aa	Known RBP	4.53	□□□□□ -1.68
FCF1	YDR339C	COG6	P53959	839 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	MTQ2	Q03920	221 aa	Predicted RBP	4.53	□□□□□ -1.68
FCF1	YDR339C	SND1	Q04007	877 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	TMA64	Q04600	565 aa	Known RBP	4.53	□□□□□ -1.68
FCF1	YDR339C	ADY4	Q05955	493 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	YTM1	Q12024	460 aa	Predicted RBP	4.53	□□□□□ -1.68
FCF1	YDR339C	NKP1	Q12493	238 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	SMC4	Q12267	1418 aa		4.53	□□□□□ -1.68
FCF1	YDR339C	SSK2	P53599	1579 aa		4.53	□□□□□ -1.69
FCF1	YDR339C	RAD18	P10862	487 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	YEF3	P16521	1044 aa	Known RBP	4.52	□□□□□ -1.69
FCF1	YDR339C	SFL1	P20134	766 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	PCL2	P25693	308 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	HIR1	P32479	840 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	PTH2	P34222	208 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	YHL017W	P38745	532 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	YHR078W	P38799	552 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	CKB2	P38930	258 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	VHR1	P40522	640 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	GZF3	P42944	551 aa	Known RBP	4.52	□□□□□ -1.69
FCF1	YDR339C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
FCF1	YDR339C	YJR120W	P47157	116 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	TAN1	P53072	289 aa	Predicted RBP	4.52	□□□□□ -1.69
FCF1	YDR339C	YGR283C	P53336	341 aa	Predicted RBP	4.52	□□□□□ -1.69
FCF1	YDR339C	ECM16	Q04217	1267 aa	Known RBP	4.52	□□□□□ -1.69
FCF1	YDR339C	YDR514C	Q04408	483 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	GUD1	Q07729	489 aa		4.52	□□□□□ -1.69
FCF1	YDR339C	SST2	P11972	698 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 171.5 ms