RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C YGR153WP48238 217 aa6.42□□□□□ -1.38
RTN1YDR233C MRPS35P53292 345 aa6.42□□□□□ -1.38
RTN1YDR233C NRD1P53617 575 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
RTN1YDR233C BRE5P53741 515 aaKnown RBP6.42□□□□□ -1.38
RTN1YDR233C PEX19Q07418 342 aa6.42□□□□□ -1.38
RTN1YDR233C YLR415CO13578 112 aa6.41□□□□□ -1.38
RTN1YDR233C MRC1P25588 1096 aa6.41□□□□□ -1.38
RTN1YDR233C ENP1P38333 483 aaKnown RBP6.41□□□□□ -1.38
RTN1YDR233C HXT6P39003 570 aaKnown RBP6.41□□□□□ -1.38
RTN1YDR233C HXT7P39004 570 aa6.41□□□□□ -1.38
RTN1YDR233C FOL1P53848 824 aa6.41□□□□□ -1.38
RTN1YDR233C COG6P53959 839 aa6.41□□□□□ -1.38
RTN1YDR233C ERG5P54781 538 aa6.41□□□□□ -1.38
RTN1YDR233C STE11P23561 717 aa6.4□□□□□ -1.38
RTN1YDR233C YBR071WP38243 211 aa6.4□□□□□ -1.38
RTN1YDR233C SSZ1P38788 538 aaKnown RBP6.4□□□□□ -1.38
RTN1YDR233C YJR039WP47107 1121 aa6.4□□□□□ -1.38
RTN1YDR233C PKH1Q03407 766 aa6.4□□□□□ -1.38
RTN1YDR233C RPS21BQ3E754 87 aaKnown RBP6.4□□□□□ -1.38
RTN1YDR233C YLR358CO13565 187 aa6.39□□□□□ -1.39
RTN1YDR233C CTF13P35203 478 aa6.39□□□□□ -1.39
RTN1YDR233C MNN11P46985 422 aaKnown RBP6.39□□□□□ -1.39
RTN1YDR233C CLU1Q03690 1277 aaKnown RBP6.39□□□□□ -1.39
RTN1YDR233C TRM11Q12463 433 aa6.39□□□□□ -1.39
RTN1YDR233C CAD1P24813 409 aaKnown RBP6.38□□□□□ -1.39
RTN1YDR233C DAL3P32459 195 aa6.38□□□□□ -1.39
RTN1YDR233C RPP1P38786 293 aa6.38□□□□□ -1.39
RTN1YDR233C MCM6P53091 1017 aaKnown RBP6.38□□□□□ -1.39
RTN1YDR233C ENB1Q08299 606 aa6.38□□□□□ -1.39
RTN1YDR233C RPS21AP0C0V8 87 aaKnown RBP6.37□□□□□ -1.39
RTN1YDR233C ADE2P21264 571 aaKnown RBP6.37□□□□□ -1.39
RTN1YDR233C NUG1P40010 520 aaKnown RBP6.37□□□□□ -1.39
RTN1YDR233C GID8P40208 455 aa6.37□□□□□ -1.39
RTN1YDR233C BUL1P48524 976 aa6.37□□□□□ -1.39
RTN1YDR233C MNN10P50108 393 aaKnown RBP6.37□□□□□ -1.39
RTN1YDR233C ORC4P54791 529 aa6.37□□□□□ -1.39
RTN1YDR233C DCG1P32460 244 aa6.36□□□□□ -1.39
RTN1YDR233C AKL1P38080 1108 aaKnown RBP6.36□□□□□ -1.39
RTN1YDR233C BEM4P39011 633 aa6.36□□□□□ -1.39
RTN1YDR233C DUG1P43616 481 aaKnown RBP6.36□□□□□ -1.39
RTN1YDR233C TRE2Q08693 809 aa6.36□□□□□ -1.39
RTN1YDR233C HFI1Q12060 488 aa6.36□□□□□ -1.39
RTN1YDR233C OAF3P36023 863 aa6.35□□□□□ -1.39
RTN1YDR233C DID4P36108 232 aa6.35□□□□□ -1.39
RTN1YDR233C MAL31P38156 614 aa6.35□□□□□ -1.39
RTN1YDR233C GPP2P40106 250 aaKnown RBP6.35□□□□□ -1.39
RTN1YDR233C NIT2P47016 307 aa6.35□□□□□ -1.39
RTN1YDR233C PRP31P49704 494 aaPredicted RBP6.35□□□□□ -1.39
RTN1YDR233C ARG5,6Q01217 863 aa6.35□□□□□ -1.39
RTN1YDR233C NRG1Q03125 231 aa6.35□□□□□ -1.39
RTN1YDR233C TGL5Q12043 749 aa6.35□□□□□ -1.39
RTN1YDR233C SWI6P09959 803 aa6.34□□□□□ -1.39
RTN1YDR233C NGG1P32494 702 aa6.34□□□□□ -1.39
RTN1YDR233C FAT1P38225 669 aa6.34□□□□□ -1.39
RTN1YDR233C YBR259WP38338 688 aa6.34□□□□□ -1.39
RTN1YDR233C YHR112CP38716 378 aa6.34□□□□□ -1.39
RTN1YDR233C MPT5P39016 859 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
RTN1YDR233C FKH2P41813 862 aa6.34□□□□□ -1.39
RTN1YDR233C SET2P46995 733 aaKnown RBP6.34□□□□□ -1.39
RTN1YDR233C YHM2Q04013 314 aa6.34□□□□□ -1.39
RTN1YDR233C APM4Q99186 491 aa6.34□□□□□ -1.39
RTN1YDR233C PMA1P05030 918 aaKnown RBP6.33□□□□□ -1.4
RTN1YDR233C CTS1P29029 562 aa6.33□□□□□ -1.4
RTN1YDR233C APL2P36000 726 aaPredicted RBP6.33□□□□□ -1.4
RTN1YDR233C APN2P38207 520 aa6.33□□□□□ -1.4
RTN1YDR233C YHR202WP38887 602 aa6.33□□□□□ -1.4
RTN1YDR233C UBP5P39944 805 aa6.33□□□□□ -1.4
RTN1YDR233C YBP2P53169 641 aa6.33□□□□□ -1.4
RTN1YDR233C TEX1P53851 422 aaKnown RBP6.33□□□□□ -1.4
RTN1YDR233C PFK1P16861 987 aaKnown RBP6.32□□□□□ -1.4
RTN1YDR233C SEC65P29478 273 aa6.32□□□□□ -1.4
RTN1YDR233C PLC1P32383 869 aa6.32□□□□□ -1.4
RTN1YDR233C SER1P33330 395 aaKnown RBP6.32□□□□□ -1.4
RTN1YDR233C ECM1P39715 212 aa6.32□□□□□ -1.4
RTN1YDR233C PEX8P53248 589 aa6.32□□□□□ -1.4
RTN1YDR233C HMO1Q03973 246 aaKnown RBP6.32□□□□□ -1.4
RTN1YDR233C YLR407WQ06070 228 aa6.32□□□□□ -1.4
RTN1YDR233C TRM13Q12383 476 aa6.32□□□□□ -1.4
RTN1YDR233C TRP4P07285 380 aaPredicted RBP6.31□□□□□ -1.4
RTN1YDR233C AEP2P22136 580 aa6.31□□□□□ -1.4
RTN1YDR233C ERG6P25087 383 aaKnown RBP6.31□□□□□ -1.4
RTN1YDR233C IMG2P25642 146 aaPredicted RBP6.31□□□□□ -1.4
RTN1YDR233C TFC4P33339 1025 aa6.31□□□□□ -1.4
RTN1YDR233C PHO23P50947 330 aa6.31□□□□□ -1.4
RTN1YDR233C PEX14P53112 341 aa6.31□□□□□ -1.4
RTN1YDR233C MCM21Q06675 368 aa6.31□□□□□ -1.4
RTN1YDR233C RMP1Q12530 201 aa6.31□□□□□ -1.4
RTN1YDR233C PYC1P11154 1178 aaKnown RBP6.3□□□□□ -1.4
RTN1YDR233C YKU70P32807 602 aa6.3□□□□□ -1.4
RTN1YDR233C GPD1Q00055 391 aaKnown RBP6.3□□□□□ -1.4
RTN1YDR233C PTA1Q01329 785 aaPredicted RBP6.3□□□□□ -1.4
RTN1YDR233C YBR053CP38235 358 aa6.29□□□□□ -1.4
RTN1YDR233C YNL195CP40168 261 aa6.29□□□□□ -1.4
RTN1YDR233C TAF1P46677 1066 aa6.29□□□□□ -1.4
RTN1YDR233C YJR008WP47085 338 aa6.29□□□□□ -1.4
RTN1YDR233C TGL2P54857 326 aa6.29□□□□□ -1.4
RTN1YDR233C YPS7Q06325 596 aa6.29□□□□□ -1.4
RTN1YDR233C HRP1Q99383 534 aaKnown RBP6.29□□□□□ -1.4
RTN1YDR233C YKR075CP36155 307 aa6.28□□□□□ -1.4
RTN1YDR233C SHM2P37291 469 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms