RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	NHA1	Q99271	985 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	Q0142	Q9ZZW4	58 aa		6.47	□□□□□ -1.37
SNF11	YDR073W	ATP12	P22135	325 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	TYE7	P33122	291 aa	Predicted RBP	6.46	□□□□□ -1.38
SNF11	YDR073W	SEG2	P34250	1132 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	RRN3	P36070	627 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	FLR1	P38124	548 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	POA1	P38218	177 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	ALT1	P52893	592 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	PCL10	P53124	433 aa		6.46	□□□□□ -1.38
SNF11	YDR073W	RCL1	Q08096	367 aa	Predicted RBP	6.46	□□□□□ -1.38
SNF11	YDR073W	RPS4A	P0CX35	261 aa	Known RBP	6.45	□□□□□ -1.38
SNF11	YDR073W	RPS4B	P0CX36	261 aa	Known RBP	6.45	□□□□□ -1.38
SNF11	YDR073W	GFA1	P14742	717 aa	Known RBP	6.45	□□□□□ -1.38
SNF11	YDR073W	TRK2	P28584	889 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	APM3	P38153	483 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	KAP123	P40069	1113 aa	Known RBP	6.45	□□□□□ -1.38
SNF11	YDR073W	SMK1	P41808	388 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	HFM1	P51979	1187 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	NCE103	P53615	221 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	HDA1	P53973	706 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	SDH1	Q00711	640 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	YKR011C	Q02209	353 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	YOR059C	Q08448	450 aa	Known RBP	6.45	□□□□□ -1.38
SNF11	YDR073W	PSF3	Q12146	194 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	DPH6	Q12429	685 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	YLR149C	Q99296	730 aa		6.45	□□□□□ -1.38
SNF11	YDR073W	XRS2	P33301	854 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	SLC1	P33333	303 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	STE13	P33894	931 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	SHM2	P37291	469 aa	Known RBP	6.44	□□□□□ -1.38
SNF11	YDR073W	ECM21	P38167	1117 aa	Known RBP	6.44	□□□□□ -1.38
SNF11	YDR073W	VID28	P40547	921 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	YJR039W	P47107	1121 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	ZIP2	P53061	704 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	YGR035C	P53222	116 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	SVS1	Q12254	260 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	SNU66	Q12420	587 aa	Predicted RBP	6.44	□□□□□ -1.38
SNF11	YDR073W	ENT1	Q12518	454 aa		6.44	□□□□□ -1.38
SNF11	YDR073W	SWI6	P09959	803 aa		6.43	□□□□□ -1.38
SNF11	YDR073W	GLN4	P13188	809 aa	Known RBP	6.43	□□□□□ -1.38
SNF11	YDR073W	YHL012W	P38709	493 aa		6.43	□□□□□ -1.38
SNF11	YDR073W	STL1	P39932	569 aa		6.43	□□□□□ -1.38
SNF11	YDR073W	EAF5	P39995	279 aa		6.43	□□□□□ -1.38
SNF11	YDR073W	VTC2	P43585	828 aa		6.43	□□□□□ -1.38
SNF11	YDR073W	RAI1	P53063	387 aa	Known RBP	6.43	□□□□□ -1.38
SNF11	YDR073W	NGL1	Q08213	363 aa	Known RBP	6.43	□□□□□ -1.38
SNF11	YDR073W	SRO9	P25567	434 aa	Known RBP	6.42	□□□□□ -1.38
SNF11	YDR073W	SRP68	P38687	599 aa	Known RBP	6.42	□□□□□ -1.38
SNF11	YDR073W	VPS8	P39702	1274 aa		6.42	□□□□□ -1.38
SNF11	YDR073W	BNA1	P47096	177 aa		6.42	□□□□□ -1.38
SNF11	YDR073W	MCH5	Q08777	521 aa		6.42	□□□□□ -1.38
SNF11	YDR073W	THI21	Q08975	551 aa		6.42	□□□□□ -1.38
SNF11	YDR073W	HAL9	Q12180	1030 aa		6.42	□□□□□ -1.38
SNF11	YDR073W	DGR2	P32330	852 aa		6.41	□□□□□ -1.38
SNF11	YDR073W	TOA1	P32773	286 aa		6.41	□□□□□ -1.38
SNF11	YDR073W	RPT3	P33298	428 aa	Known RBP	6.41	□□□□□ -1.38
SNF11	YDR073W	TGL1	P34163	548 aa		6.41	□□□□□ -1.38
SNF11	YDR073W	RRM3	P38766	723 aa		6.41	□□□□□ -1.38
SNF11	YDR073W	SSZ1	P38788	538 aa	Known RBP	6.41	□□□□□ -1.38
SNF11	YDR073W	SCS2	P40075	244 aa	Known RBP	6.41	□□□□□ -1.38
SNF11	YDR073W	NOP15	P53927	220 aa	Predicted RBP	6.41	□□□□□ -1.38
SNF11	YDR073W	MTD1	Q02046	320 aa	Known RBP	6.41	□□□□□ -1.38
SNF11	YDR073W	MRPL13	Q02204	264 aa		6.41	□□□□□ -1.38
SNF11	YDR073W	XYL2	Q07993	356 aa		6.41	□□□□□ -1.38
SNF11	YDR073W	NUC1	P08466	329 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	SAN1	P22470	610 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	HXT4	P32467	576 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	RPD3	P32561	433 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	MDL2	P33311	773 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	TAF5	P38129	798 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	YHR202W	P38887	602 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	SPC72	P39723	622 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	YIL108W	P40483	696 aa	Known RBP	6.4	□□□□□ -1.38
SNF11	YDR073W	MAD3	P47074	515 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	ARP4	P80428	489 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.4	□□□□□ -1.38	not detected
SNF11	YDR073W	EAR1	Q03212	550 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	YMR210W	Q03649	449 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	EIS1	Q05050	843 aa	Known RBP	6.4	□□□□□ -1.38
SNF11	YDR073W	HPF1	Q05164	967 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	VIP1	Q06685	1146 aa	Known RBP	6.4	□□□□□ -1.38
SNF11	YDR073W	RSC58	Q07979	502 aa		6.4	□□□□□ -1.38
SNF11	YDR073W	TY1A-NL1	Q12391	440 aa	Known RBP	6.4	□□□□□ -1.38
SNF11	YDR073W	MRP7	P12687	371 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	OPI1	P21957	404 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	DUN1	P39009	513 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	FAF1	P40546	346 aa	Predicted RBP	6.39	□□□□□ -1.39
SNF11	YDR073W	IRC5	P43610	853 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	JJJ3	P47138	172 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	ENP2	P48234	707 aa	Known RBP	6.39	□□□□□ -1.39
SNF11	YDR073W	ARC35	P53731	342 aa	Known RBP	6.39	□□□□□ -1.39
SNF11	YDR073W	DUS1	P53759	423 aa	Known RBP	6.39	□□□□□ -1.39
SNF11	YDR073W	YLR407W	Q06070	228 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	SGD1	Q06132	899 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	SDH5	Q08230	162 aa		6.39	□□□□□ -1.39
SNF11	YDR073W	PHO5	P00635	467 aa		6.38	□□□□□ -1.39
SNF11	YDR073W	RPS17A	P02407	136 aa	Known RBP	6.38	□□□□□ -1.39
SNF11	YDR073W	RPS17B	P14127	136 aa	Known RBP	6.38	□□□□□ -1.39
SNF11	YDR073W	CDC26	P14724	124 aa		6.38	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms