RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeast

Gene RRP42, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP42	YDL111C	HIR1	P32479	840 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	ATG19	P35193	415 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	OAR1	P35731	278 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	DID4	P36108	232 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	HSL7	P38274	827 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	DOT6	P40059	670 aa	Known RBP	4.16	□□□□□ -1.74
RRP42	YDL111C	NIT2	P47016	307 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	HXT16	P47185	567 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	YPR196W	Q06595	470 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	NPC2	Q12408	173 aa		4.16	□□□□□ -1.74
RRP42	YDL111C	DAL7	P21826	554 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	URA1	P28272	314 aa	Predicted RBP	4.15	□□□□□ -1.75
RRP42	YDL111C	MOH1	P38191	138 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	CCT5	P40413	562 aa	Known RBP	4.15	□□□□□ -1.75
RRP42	YDL111C	RLP7	P40693	322 aa	Known RBP	4.15	□□□□□ -1.75
RRP42	YDL111C	RET2	P43621	546 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	ALY2	P47029	1046 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	TAD1	P53065	400 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	AIM14	P53109	570 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	SFB2	P53953	876 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	BUD21	Q08492	214 aa	Predicted RBP	4.15	□□□□□ -1.75
RRP42	YDL111C	RMP1	Q12530	201 aa		4.15	□□□□□ -1.75
RRP42	YDL111C	DIF1	O13577	133 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	KAR4	P25583	335 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	CCR4	P31384	837 aa	Known RBP	4.14	□□□□□ -1.75
RRP42	YDL111C	TFC4	P33339	1025 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	FUI1	P38196	639 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	EMP65	P40085	556 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	GPP2	P40106	250 aa	Known RBP	4.14	□□□□□ -1.75
RRP42	YDL111C	YGR153W	P48238	217 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	YNL034W	P53963	612 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	YNL018C	P53976	612 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	VPS30	Q02948	557 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	ATG16	Q03818	150 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	WHI4	Q07655	649 aa	Known RBP	4.14	□□□□□ -1.75
RRP42	YDL111C	YBR182C-A	Q8TGU6	64 aa		4.14	□□□□□ -1.75
RRP42	YDL111C	YEF3	P16521	1044 aa	Known RBP	4.13	□□□□□ -1.75
RRP42	YDL111C	EFT1	P32324	842 aa	Known RBP	4.13	□□□□□ -1.75
RRP42	YDL111C	STE13	P33894	931 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	TDA3	P38758	523 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	SET5	P38890	526 aa	Known RBP	4.13	□□□□□ -1.75
RRP42	YDL111C	BUL1	P48524	976 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	PIP2	P52960	996 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	YGR021W	P53212	290 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	PAP2	P53632	584 aa	Known RBP	4.13	□□□□□ -1.75
RRP42	YDL111C	UBX4	P54730	416 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	YDR338C	Q05497	695 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	UPC2	Q12151	913 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	MPD2	Q99316	277 aa		4.13	□□□□□ -1.75
RRP42	YDL111C	RPS9A	O13516	197 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	NOT3	P06102	836 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	TRX2	P22803	104 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	MIH1	P23748	554 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	CYS3	P31373	394 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	TYE7	P33122	291 aa	Predicted RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	NIC96	P34077	839 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	SHR5	P41912	237 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	RAI1	P53063	387 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	HDA1	P53973	706 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	MET14	Q02196	202 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	ECM9	Q02202	377 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	LRS4	Q04087	347 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	RRP6	Q12149	733 aa	Known RBP	4.12	□□□□□ -1.75
RRP42	YDL111C	APM4	Q99186	491 aa		4.12	□□□□□ -1.75
RRP42	YDL111C	PIF1	P07271	859 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	YCL002C	P25565	263 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	PTP2	P29461	750 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	STE14	P32584	239 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	YKL133C	P36066	463 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	SAP190	P36123	1033 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	BIT2	P38346	545 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	RIM4	P38741	713 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	IES5	P40060	125 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	CEP3	P40969	608 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	BNA2	P47125	453 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	UBA2	P52488	636 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	SLD3	P53135	668 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	NPY1	P53164	384 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	YKR011C	Q02209	353 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	SKY1	Q03656	742 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	ECM16	Q04217	1267 aa	Known RBP	4.11	□□□□□ -1.75
RRP42	YDL111C	PHM6	Q05637	104 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	YDL121C	Q07541	149 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	THI21	Q08975	551 aa		4.11	□□□□□ -1.75
RRP42	YDL111C	GAL1	P04385	528 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	PGI1	P12709	554 aa	Known RBP	4.1	□□□□□ -1.75
RRP42	YDL111C	HEM12	P32347	362 aa	Predicted RBP	4.1	□□□□□ -1.75
RRP42	YDL111C	PTH2	P34222	208 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	YKR018C	P36114	725 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	MAL31	P38156	614 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	RRP8	P38961	392 aa	Known RBP	4.1	□□□□□ -1.75
RRP42	YDL111C	YFL052W	P43551	465 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	UBC9	P50623	157 aa	Predicted RBP	4.1	□□□□□ -1.75
RRP42	YDL111C	SPC105	P53148	917 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	PTA1	Q01329	785 aa	Predicted RBP	4.1	□□□□□ -1.75
RRP42	YDL111C	MLC2	Q06580	163 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	YLR040C	Q07988	224 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	PEX15	Q08215	383 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	HFI1	Q12060	488 aa		4.1	□□□□□ -1.75
RRP42	YDL111C	NKP1	Q12493	238 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms