RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W RXT3Q07458 294 aa5.78□□□□□ -1.48
PTC1YDL006W NOP12Q08208 459 aaKnown RBP5.78□□□□□ -1.48
PTC1YDL006W THI21Q08975 551 aa5.78□□□□□ -1.48
PTC1YDL006W DIF1O13577 133 aa5.77□□□□□ -1.49
PTC1YDL006W SOD2P00447 233 aa5.77□□□□□ -1.49
PTC1YDL006W HIS5P07172 385 aa5.77□□□□□ -1.49
PTC1YDL006W CTF8P38877 133 aa5.77□□□□□ -1.49
PTC1YDL006W RPN10P38886 268 aaKnown RBP5.77□□□□□ -1.49
PTC1YDL006W NIT1P40447 199 aa5.77□□□□□ -1.49
PTC1YDL006W PRC1P00729 532 aa5.76□□□□□ -1.49
PTC1YDL006W SFL1P20134 766 aa5.76□□□□□ -1.49
PTC1YDL006W YCL002CP25565 263 aa5.76□□□□□ -1.49
PTC1YDL006W RPD3P32561 433 aa5.76□□□□□ -1.49
PTC1YDL006W SEG2P34250 1132 aa5.76□□□□□ -1.49
PTC1YDL006W SAP190P36123 1033 aa5.76□□□□□ -1.49
PTC1YDL006W SDP1P40479 209 aa5.76□□□□□ -1.49
PTC1YDL006W SHR5P41912 237 aa5.76□□□□□ -1.49
PTC1YDL006W CHA4P43634 648 aa5.76□□□□□ -1.49
PTC1YDL006W RIM8P53179 542 aa5.76□□□□□ -1.49
PTC1YDL006W GTF1P53260 183 aaPredicted RBP5.76□□□□□ -1.49
PTC1YDL006W NHX1Q04121 633 aa5.76□□□□□ -1.49
PTC1YDL006W SSL1Q04673 461 aaPredicted RBP5.76□□□□□ -1.49
PTC1YDL006W CDA2Q06703 312 aa5.76□□□□□ -1.49
PTC1YDL006W ACK1Q07622 623 aaPredicted RBP5.76□□□□□ -1.49
PTC1YDL006W YOR093CQ12275 1648 aa5.75□□□□□ -1.49
PTC1YDL006W RPS13P05756 151 aaKnown RBP5.75□□□□□ -1.49
PTC1YDL006W TSR4P25040 408 aa5.75□□□□□ -1.49
PTC1YDL006W EMC1P25574 760 aa5.75□□□□□ -1.49
PTC1YDL006W PCM1P38628 557 aaKnown RBP5.75□□□□□ -1.49
PTC1YDL006W DUS1P53759 423 aaKnown RBP5.75□□□□□ -1.49
PTC1YDL006W THI73Q07904 523 aa5.75□□□□□ -1.49
PTC1YDL006W GUP2Q08929 609 aa5.75□□□□□ -1.49
PTC1YDL006W UPC2Q12151 913 aa5.75□□□□□ -1.49
PTC1YDL006W HAL9Q12180 1030 aa5.75□□□□□ -1.49
PTC1YDL006W YOR022CQ12204 715 aa5.75□□□□□ -1.49
PTC1YDL006W NUP145P49687 1317 aa5.74□□□□□ -1.49
PTC1YDL006W GAS1P22146 559 aaKnown RBP5.74□□□□□ -1.49
PTC1YDL006W SED4P25365 1065 aa5.74□□□□□ -1.49
PTC1YDL006W ELM1P32801 640 aa5.74□□□□□ -1.49
PTC1YDL006W HSL7P38274 827 aa5.74□□□□□ -1.49
PTC1YDL006W UME1Q03010 460 aa5.74□□□□□ -1.49
PTC1YDL006W YDR338CQ05497 695 aa5.74□□□□□ -1.49
PTC1YDL006W NUP188P52593 1655 aaKnown RBP5.74□□□□□ -1.49
PTC1YDL006W PDR5P33302 1511 aaKnown RBP5.74□□□□□ -1.49
PTC1YDL006W IML1P47170 1584 aa5.73□□□□□ -1.49
PTC1YDL006W PRP6P19735 899 aaPredicted RBP5.73□□□□□ -1.49
PTC1YDL006W CDC20P26309 610 aa5.73□□□□□ -1.49
PTC1YDL006W STE14P32584 239 aa5.73□□□□□ -1.49
PTC1YDL006W TYS1P36421 394 aaKnown RBP5.73□□□□□ -1.49
PTC1YDL006W YHR078WP38799 552 aa5.73□□□□□ -1.49
PTC1YDL006W BNA2P47125 453 aa5.73□□□□□ -1.49
PTC1YDL006W YGR237CP50089 785 aa5.73□□□□□ -1.49
PTC1YDL006W NCS6P53088 359 aa5.73□□□□□ -1.49
PTC1YDL006W MET13P53128 600 aa5.73□□□□□ -1.49
PTC1YDL006W YAP6Q03935 383 aa5.73□□□□□ -1.49
PTC1YDL006W ATG33Q06485 197 aa5.73□□□□□ -1.49
PTC1YDL006W GUD1Q07729 489 aa5.73□□□□□ -1.49
PTC1YDL006W YPL277CQ08989 487 aa5.73□□□□□ -1.49
PTC1YDL006W SSB1P11484 613 aaKnown RBP5.72□□□□□ -1.49
PTC1YDL006W DOT6P40059 670 aaKnown RBP5.72□□□□□ -1.49
PTC1YDL006W SSB2P40150 613 aaKnown RBP5.72□□□□□ -1.49
PTC1YDL006W GCV2P49095 1034 aa5.72□□□□□ -1.49
PTC1YDL006W SPT20P50875 604 aa5.72□□□□□ -1.49
PTC1YDL006W ZIP2P53061 704 aa5.72□□□□□ -1.49
PTC1YDL006W WHI4Q07655 649 aaKnown RBP5.72□□□□□ -1.49
PTC1YDL006W GIN4Q12263 1142 aa5.72□□□□□ -1.49
PTC1YDL006W VMR1P38735 1592 aa5.72□□□□□ -1.49
PTC1YDL006W HMG1P12683 1054 aa5.71□□□□□ -1.5
PTC1YDL006W MIH1P23748 554 aa5.71□□□□□ -1.5
PTC1YDL006W AIM3P38266 947 aaKnown RBP5.71□□□□□ -1.5
PTC1YDL006W YEN1P40028 759 aa5.71□□□□□ -1.5
PTC1YDL006W RAV1P47104 1357 aa5.7□□□□□ -1.5
PTC1YDL006W YFL052WP43551 465 aa5.7□□□□□ -1.5
PTC1YDL006W NPY1P53164 384 aa5.7□□□□□ -1.5
PTC1YDL006W MAK10Q02197 733 aa5.7□□□□□ -1.5
PTC1YDL006W YLR224WQ05947 369 aa5.7□□□□□ -1.5
PTC1YDL006W NPC2Q12408 173 aa5.7□□□□□ -1.5
PTC1YDL006W RTC1Q08281 1341 aa5.7□□□□□ -1.5
PTC1YDL006W PDR11P40550 1411 aa5.69□□□□□ -1.5
PTC1YDL006W STE11P23561 717 aa5.69□□□□□ -1.5
PTC1YDL006W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
PTC1YDL006W CCR4P31384 837 aaKnown RBP5.69□□□□□ -1.5
PTC1YDL006W CKB2P38930 258 aa5.69□□□□□ -1.5
PTC1YDL006W GPG1P53130 126 aa5.69□□□□□ -1.5
PTC1YDL006W HFD1Q04458 532 aa5.69□□□□□ -1.5
PTC1YDL006W CRR1Q05790 422 aa5.69□□□□□ -1.5
PTC1YDL006W KCS1Q12494 1050 aa5.69□□□□□ -1.5
PTC1YDL006W DNF3Q12674 1656 aa5.69□□□□□ -1.5
PTC1YDL006W PRE10P21242 288 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
PTC1YDL006W YKR018CP36114 725 aa5.68□□□□□ -1.5
PTC1YDL006W SSY5P47002 699 aa5.68□□□□□ -1.5
PTC1YDL006W YJR096WP47137 282 aa5.68□□□□□ -1.5
PTC1YDL006W AIM14P53109 570 aa5.68□□□□□ -1.5
PTC1YDL006W ASI2P53895 289 aa5.68□□□□□ -1.5
PTC1YDL006W MTQ2Q03920 221 aaPredicted RBP5.68□□□□□ -1.5
PTC1YDL006W FAP7Q12055 197 aaPredicted RBP5.68□□□□□ -1.5
PTC1YDL006W GLT1Q12680 2145 aaKnown RBP5.68□□□□□ -1.5
PTC1YDL006W MRC1P25588 1096 aa5.67□□□□□ -1.5
PTC1YDL006W NGG1P32494 702 aa5.67□□□□□ -1.5
PTC1YDL006W YKR051WP36142 418 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 122.5 ms