RNA–Protein interactions for RNA: YBR152W

SPP381, Transcript of mRNA splicing factor, component of U4/U6.U5 tri-snRNP, yeast

Gene SPP381, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP381	YBR152W	KTR4	P38131	464 aa		5.07	□□□□□ -1.6
SPP381	YBR152W	PAF1	P38351	445 aa		5.07	□□□□□ -1.6
SPP381	YBR152W	MSS4	P38994	779 aa		5.07	□□□□□ -1.6
SPP381	YBR152W	RET2	P43621	546 aa		5.07	□□□□□ -1.6
SPP381	YBR152W	AIM14	P53109	570 aa		5.07	□□□□□ -1.6
SPP381	YBR152W	GPD1	Q00055	391 aa	Known RBP	5.07	□□□□□ -1.6
SPP381	YBR152W	MTQ2	Q03920	221 aa	Predicted RBP	5.07	□□□□□ -1.6
SPP381	YBR152W	MCM21	Q06675	368 aa		5.07	□□□□□ -1.6
SPP381	YBR152W	PMI40	P29952	429 aa	Known RBP	5.06	□□□□□ -1.6
SPP381	YBR152W	APL2	P36000	726 aa	Predicted RBP	5.06	□□□□□ -1.6
SPP381	YBR152W	APT2	P36973	181 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	GID8	P40208	455 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	CCT5	P40413	562 aa	Known RBP	5.06	□□□□□ -1.6
SPP381	YBR152W	YJR039W	P47107	1121 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	YJR096W	P47137	282 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	ERG5	P54781	538 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	NRG1	Q03125	231 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	FAP7	Q12055	197 aa	Predicted RBP	5.06	□□□□□ -1.6
SPP381	YBR152W	NTO1	Q12311	748 aa		5.06	□□□□□ -1.6
SPP381	YBR152W	MET3	P08536	511 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	SSB1	P11484	613 aa	Known RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	PRP4	P20053	465 aa	Known RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
SPP381	YBR152W	TSR4	P25040	408 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	MRC1	P25588	1096 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	PRP19	P32523	503 aa	Known RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	DEF1	P35732	738 aa	Known RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	DID4	P36108	232 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	SHM2	P37291	469 aa	Known RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	SSB2	P40150	613 aa	Known RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	BFA1	P47113	574 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	PRP31	P49704	494 aa	Predicted RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	UBC9	P50623	157 aa	Predicted RBP	5.05	□□□□□ -1.6
SPP381	YBR152W	REC102	Q02721	264 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	DLT1	Q04216	342 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	AIM39	Q08223	395 aa		5.05	□□□□□ -1.6
SPP381	YBR152W	YCR015C	P25616	317 aa		5.04	□□□□□ -1.6
SPP381	YBR152W	TDA3	P38758	523 aa		5.04	□□□□□ -1.6
SPP381	YBR152W	SSZ1	P38788	538 aa	Known RBP	5.04	□□□□□ -1.6
SPP381	YBR152W	GPP1	P41277	250 aa	Known RBP	5.04	□□□□□ -1.6
SPP381	YBR152W	MNN11	P46985	422 aa	Known RBP	5.04	□□□□□ -1.6
SPP381	YBR152W	GPG1	P53130	126 aa		5.04	□□□□□ -1.6
SPP381	YBR152W	ARG5,6	Q01217	863 aa		5.04	□□□□□ -1.6
SPP381	YBR152W	EFT1	P32324	842 aa	Known RBP	5.03	□□□□□ -1.6
SPP381	YBR152W	TRM2	P33753	639 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	MNN4	P36044	1178 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	TRZ1	P36159	838 aa	Predicted RBP	5.03	□□□□□ -1.6
SPP381	YBR152W	YEN1	P40028	759 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	YIR042C	P40586	236 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	DUG1	P43616	481 aa	Known RBP	5.03	□□□□□ -1.6
SPP381	YBR152W	SET2	P46995	733 aa	Known RBP	5.03	□□□□□ -1.6
SPP381	YBR152W	GSF2	Q04697	403 aa	Known RBP	5.03	□□□□□ -1.6
SPP381	YBR152W	GAD1	Q04792	585 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	DCS2	Q12123	353 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	LAS17	Q12446	633 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	APM4	Q99186	491 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	Q0142	Q9ZZW4	58 aa		5.03	□□□□□ -1.6
SPP381	YBR152W	LAT1	P12695	482 aa	Known RBP	5.02	□□□□□ -1.61
SPP381	YBR152W	YKR075C	P36155	307 aa		5.02	□□□□□ -1.61
SPP381	YBR152W	APN2	P38207	520 aa		5.02	□□□□□ -1.61
SPP381	YBR152W	OAF1	P39720	1047 aa	Predicted RBP	5.02	□□□□□ -1.61
SPP381	YBR152W	GIP4	P39732	760 aa		5.02	□□□□□ -1.61
SPP381	YBR152W	YGR153W	P48238	217 aa		5.02	□□□□□ -1.61
SPP381	YBR152W	CAF20	P12962	161 aa	Known RBP	5.01	□□□□□ -1.61
SPP381	YBR152W	BEM4	P39011	633 aa		5.01	□□□□□ -1.61
SPP381	YBR152W	BAP3	P41815	604 aa		5.01	□□□□□ -1.61
SPP381	YBR152W	BUL1	P48524	976 aa		5.01	□□□□□ -1.61
SPP381	YBR152W	HMO1	Q03973	246 aa	Known RBP	5.01	□□□□□ -1.61
SPP381	YBR152W	ADE2	P21264	571 aa	Known RBP	5	□□□□□ -1.61
SPP381	YBR152W	ERG4	P25340	473 aa		5	□□□□□ -1.61
SPP381	YBR152W	HRR25	P29295	494 aa	Known RBP	5	□□□□□ -1.61
SPP381	YBR152W	AKL1	P38080	1108 aa	Known RBP	5	□□□□□ -1.61
SPP381	YBR152W	ELO3	P40319	345 aa		5	□□□□□ -1.61
SPP381	YBR152W	PHO23	P50947	330 aa		5	□□□□□ -1.61
SPP381	YBR152W	ARP4	P80428	489 aa		5	□□□□□ -1.61
SPP381	YBR152W	RNT1	Q02555	471 aa		5	□□□□□ -1.61
SPP381	YBR152W	CTK1	Q03957	528 aa	Known RBP	5	□□□□□ -1.61
SPP381	YBR152W	ASM4	Q05166	528 aa		5	□□□□□ -1.61
SPP381	YBR152W	TRE2	Q08693	809 aa		5	□□□□□ -1.61
SPP381	YBR152W	TGL5	Q12043	749 aa		5	□□□□□ -1.61
SPP381	YBR152W	YKL222C	P35995	705 aa		4.99	□□□□□ -1.61
SPP381	YBR152W	FKH2	P41813	862 aa		4.99	□□□□□ -1.61
SPP381	YBR152W	TAF1	P46677	1066 aa		4.99	□□□□□ -1.61
SPP381	YBR152W	BRE5	P53741	515 aa	Known RBP	4.99	□□□□□ -1.61
SPP381	YBR152W	TEX1	P53851	422 aa	Known RBP	4.99	□□□□□ -1.61
SPP381	YBR152W	PTA1	Q01329	785 aa	Predicted RBP	4.99	□□□□□ -1.61
SPP381	YBR152W	ECM9	Q02202	377 aa		4.99	□□□□□ -1.61
SPP381	YBR152W	HFI1	Q12060	488 aa		4.99	□□□□□ -1.61
SPP381	YBR152W	SWI6	P09959	803 aa		4.98	□□□□□ -1.61
SPP381	YBR152W	YHR112C	P38716	378 aa		4.98	□□□□□ -1.61
SPP381	YBR152W	CLF1	Q12309	687 aa	Predicted RBP	4.98	□□□□□ -1.61
SPP381	YBR152W	TUB2	P02557	457 aa	Known RBP	4.97	□□□□□ -1.61
SPP381	YBR152W	PPR1	P07272	904 aa	Predicted RBP	4.97	□□□□□ -1.61
SPP381	YBR152W	PYC1	P11154	1178 aa	Known RBP	4.97	□□□□□ -1.61
SPP381	YBR152W	PET127	P32606	800 aa		4.97	□□□□□ -1.61
SPP381	YBR152W	TOM20	P35180	183 aa		4.97	□□□□□ -1.61
SPP381	YBR152W	YBR053C	P38235	358 aa		4.97	□□□□□ -1.61
SPP381	YBR152W	YBR071W	P38243	211 aa		4.97	□□□□□ -1.61
SPP381	YBR152W	YHR202W	P38887	602 aa		4.97	□□□□□ -1.61
SPP381	YBR152W	HXT6	P39003	570 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms