RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	ANKRD1	Q15327	319 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	TSGA10IP	Q3SY00	556 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	KBTBD3	Q8NAB2	608 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	LEO1	Q8WVC0	666 aa	Predicted RBP	19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	GPHN	Q9NQX3	736 aa	Predicted RBP	19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	UQCRHL	A0A096LP55	91 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	UQCRH	P07919	91 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	FGD1	P98174	961 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	PAG1	Q9NWQ8	432 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	SPATA31A3	Q5VYP0	1347 aa		19.94	■□□□□ 0.78
PHGDH-223	ENST00000641597	NR1I2	O75469	434 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	SYNE4	Q8N205	404 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	TSC1	Q92574	1164 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	ARID3A	Q99856	593 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597		A0A087WWV3	80 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	UVSSA	Q2YD98	709 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	PRDM11	Q9NQV5	511 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	TNS3	Q68CZ2	1445 aa		19.93	■□□□□ 0.78
PHGDH-223	ENST00000641597	GUCY1B3	Q02153	619 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	KIAA2012	Q0VF49	1180 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	CWC25	Q9NXE8	425 aa	Predicted RBP	19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	FAM13B	Q9NYF5	915 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	MRVI1	Q9Y6F6	885 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	LMTK3	Q96Q04	1460 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	LETM1	O95202	739 aa	Predicted RBP	19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	NUP62CL	Q9H1M0	184 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	STRN4	Q9NRL3	753 aa		19.92	■□□□□ 0.78
PHGDH-223	ENST00000641597	PDC	P20941	246 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	ADORA1	P30542	326 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	PI16	Q6UXB8	463 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597		A0A1B0GUL7	405 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	CTDNEP1	O95476	244 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	MCM5	P33992	734 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	FKBP4	Q02790	459 aa	Known RBP eCLIP	19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	CSPP1	Q1MSJ5	1256 aa		19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	ZCRB1	Q8TBF4	217 aa	Known RBP	19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597		U3KPZ7	1027 aa	Predicted RBP	19.91	■□□□□ 0.78
PHGDH-223	ENST00000641597	TYRO3	Q06418	890 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	RAB11FIP4	Q86YS3	637 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	KCNF1	Q9H3M0	494 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	GOLGA6L4	A6NEF3	574 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	FAM177B	A6PVY3	158 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597		M0R2C6	588 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	HAND2	P61296	217 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	REST	Q13127	1097 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	DNTTIP2	Q5QJE6	756 aa	Known RBP	19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	TNMD	Q9H2S6	317 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	MAST3	O60307	1309 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597		H3BQV1	296 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	CCDC192	P0DO97	292 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	MAP3K11	Q16584	847 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	IFFO2	Q5TF58	517 aa		19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	19.9	■□□□□ 0.78
PHGDH-223	ENST00000641597	HSPD1	P10809	573 aa	Known RBP	19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	SCARF1	Q14162	830 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	ANO6	Q4KMQ2	910 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	BICD2	Q8TD16	824 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	PYCARD	Q9ULZ3	195 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	LAMA4	Q16363	1823 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	KRT32	Q14532	448 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	FAM89A	Q96GI7	184 aa		19.89	■□□□□ 0.77
PHGDH-223	ENST00000641597	PKD1L3	Q7Z443	1732 aa		19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	RRP9	O43818	475 aa	Known RBP	19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	IFIT1	P09914	478 aa	Known RBP	19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	EYA2	O00167	538 aa		19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	NOLC1	Q14978	699 aa	Known RBP eCLIP	19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	BRINP3	Q76B58	766 aa		19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	NSUN7	Q8NE18	718 aa	Known RBP	19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	ERCC4	Q92889	916 aa	Predicted RBP	19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	OSBP2	Q969R2	916 aa		19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	TAOK2	Q9UL54	1235 aa		19.88	■□□□□ 0.77
PHGDH-223	ENST00000641597	ELP1	O95163	1332 aa		19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597		E7EWF7	191 aa		19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597	CADPS2	Q86UW7	1296 aa		19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597	ZMYM1	Q5SVZ6	1142 aa		19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597	OTUD7B	Q6GQQ9	843 aa		19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597	DHX32	Q7L7V1	743 aa	Known RBP	19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597	SCAND2P	Q9GZW5	306 aa	Predicted RBP	19.87	■□□□□ 0.77
PHGDH-223	ENST00000641597	SH3TC1	Q8TE82	1336 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	TJP1	Q07157	1748 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	PTPDC1	A2A3K4	754 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	CBX8	Q9HC52	389 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	FOXP2	O15409	715 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	IL15	P40933	162 aa	Predicted RBP	19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	PIBF1	Q8WXW3	757 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	DNAJC25	Q9H1X3	360 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	GJB4	Q9NTQ9	266 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	NRBP1	Q9UHY1	535 aa		19.86	■□□□□ 0.77
PHGDH-223	ENST00000641597	WDR17	Q8IZU2	1322 aa		19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	KAT6B	Q8WYB5	2073 aa		19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	ADD1	P35611	737 aa	Known RBP	19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	PCDH11X	Q9BZA7	1347 aa		19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	PCDH11Y	Q9BZA8	1340 aa		19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	FAM200A	Q8TCP9	573 aa		19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	DENND2A	Q9ULE3	1009 aa		19.85	■□□□□ 0.77
PHGDH-223	ENST00000641597	PFKFB2	O60825	505 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	PTGS1	P23219	599 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	EXOSC10	Q01780	885 aa	Known RBP	19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	NKX2-3	Q8TAU0	364 aa		19.84	■□□□□ 0.77
PHGDH-223	ENST00000641597	UBE2Q2	Q8WVN8	375 aa		19.84	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms