RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 MOB2Q70IA6 237 aa17.96■□□□□ 0.47
HLA-C-210ENST00000640219 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
HLA-C-210ENST00000640219 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
HLA-C-210ENST00000640219 PAPPA2Q9BXP8 1791 aa17.96■□□□□ 0.47
HLA-C-210ENST00000640219 KDM3BQ7LBC6 1761 aa17.95■□□□□ 0.46
HLA-C-210ENST00000640219 VIL1P09327 827 aaKnown RBP17.95■□□□□ 0.46
HLA-C-210ENST00000640219 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
HLA-C-210ENST00000640219 EYA3Q99504 573 aa17.95■□□□□ 0.46
HLA-C-210ENST00000640219 PRKRIP1Q9H875 184 aaPredicted RBP17.95■□□□□ 0.46
HLA-C-210ENST00000640219 TAF1P21675 1872 aa17.95■□□□□ 0.46
HLA-C-210ENST00000640219 POTEFA5A3E0 1075 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 GPSM2P81274 684 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 HSP90AB3PQ58FF7 597 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 LRP10Q7Z4F1 713 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 LRRC37AA6NMS7 1700 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 SH3TC1Q8TE82 1336 aa17.94■□□□□ 0.46
HLA-C-210ENST00000640219 INTS3Q68E01 1043 aaKnown RBP17.93■□□□□ 0.46
HLA-C-210ENST00000640219 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
HLA-C-210ENST00000640219 ZNF280AP59817 542 aaPredicted RBP17.92■□□□□ 0.46
HLA-C-210ENST00000640219 SREBF2Q12772 1141 aa17.92■□□□□ 0.46
HLA-C-210ENST00000640219 MKRN3Q13064 507 aaKnown RBP17.92■□□□□ 0.46
HLA-C-210ENST00000640219 PDIA6Q15084 440 aa17.92■□□□□ 0.46
HLA-C-210ENST00000640219 CELF1Q92879 486 aaKnown RBP17.92■□□□□ 0.46
HLA-C-210ENST00000640219 CFHR5Q9BXR6 569 aa17.92■□□□□ 0.46
HLA-C-210ENST00000640219 R3HDMLQ9H3Y0 253 aa17.92■□□□□ 0.46
HLA-C-210ENST00000640219 MKI67P46013 3256 aaKnown RBP17.91■□□□□ 0.46
HLA-C-210ENST00000640219 G3V3G9 751 aa17.91■□□□□ 0.46
HLA-C-210ENST00000640219 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
HLA-C-210ENST00000640219 TTLL12Q14166 644 aaPredicted RBP17.91■□□□□ 0.46
HLA-C-210ENST00000640219 CCDC184Q52MB2 194 aa17.91■□□□□ 0.46
HLA-C-210ENST00000640219 DCAF8Q5TAQ9 597 aa17.91■□□□□ 0.46
HLA-C-210ENST00000640219 ZC3H12CQ9C0D7 883 aaKnown RBP17.91■□□□□ 0.46
HLA-C-210ENST00000640219 PITPNM2Q9BZ72 1349 aa17.91■□□□□ 0.46
HLA-C-210ENST00000640219 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
HLA-C-210ENST00000640219 ANXA1P04083 346 aa17.9■□□□□ 0.46
HLA-C-210ENST00000640219 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
HLA-C-210ENST00000640219 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
HLA-C-210ENST00000640219 SCAF8Q9UPN6 1271 aaKnown RBP17.9■□□□□ 0.46
HLA-C-210ENST00000640219 TRIM17Q9Y577 477 aa17.9■□□□□ 0.46
HLA-C-210ENST00000640219 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
HLA-C-210ENST00000640219 TCIRG1Q13488 830 aa17.89■□□□□ 0.45
HLA-C-210ENST00000640219 PRAMEF18Q5VWM3 479 aa17.89■□□□□ 0.45
HLA-C-210ENST00000640219 RSBN1LQ6PCB5 846 aaPredicted RBP17.89■□□□□ 0.45
HLA-C-210ENST00000640219 AGBL3Q8NEM8 1001 aa17.89■□□□□ 0.45
HLA-C-210ENST00000640219 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
HLA-C-210ENST00000640219 NEFMP07197 916 aa17.88■□□□□ 0.45
HLA-C-210ENST00000640219 COPS6Q7L5N1 327 aa17.88■□□□□ 0.45
HLA-C-210ENST00000640219 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
HLA-C-210ENST00000640219 COLQQ9Y215 455 aaPredicted RBP17.88■□□□□ 0.45
HLA-C-210ENST00000640219 SCN9AQ15858 1988 aa17.88■□□□□ 0.45
HLA-C-210ENST00000640219 USP17L8P0C7I0 530 aa17.87■□□□□ 0.45
HLA-C-210ENST00000640219 SF3B3Q15393 1217 aaKnown RBP17.87■□□□□ 0.45
HLA-C-210ENST00000640219 OTOP1Q7RTM1 612 aa17.87■□□□□ 0.45
HLA-C-210ENST00000640219 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
HLA-C-210ENST00000640219 ALDH1A1P00352 501 aa17.86■□□□□ 0.45
HLA-C-210ENST00000640219 EN2P19622 333 aaPredicted RBP17.86■□□□□ 0.45
HLA-C-210ENST00000640219 NF2P35240 595 aa17.86■□□□□ 0.45
HLA-C-210ENST00000640219 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
HLA-C-210ENST00000640219 XAGE3Q8WTP9 111 aa17.86■□□□□ 0.45
HLA-C-210ENST00000640219 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
HLA-C-210ENST00000640219 ZNF609O15014 1411 aa17.86■□□□□ 0.45
HLA-C-210ENST00000640219 PTPN12Q05209 780 aaKnown RBP17.85■□□□□ 0.45
HLA-C-210ENST00000640219 NEUROD2Q15784 382 aa17.85■□□□□ 0.45
HLA-C-210ENST00000640219 GMLQ99445 158 aa17.85■□□□□ 0.45
HLA-C-210ENST00000640219 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
HLA-C-210ENST00000640219 UFL1O94874 794 aa17.84■□□□□ 0.45
HLA-C-210ENST00000640219 RPS8P62241 208 aaKnown RBP17.84■□□□□ 0.45
HLA-C-210ENST00000640219 FAM89AQ96GI7 184 aa17.84■□□□□ 0.45
HLA-C-210ENST00000640219 PODXL2Q9NZ53 605 aa17.84■□□□□ 0.45
HLA-C-210ENST00000640219 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
HLA-C-210ENST00000640219 HTTP42858 3142 aa17.84■□□□□ 0.45
HLA-C-210ENST00000640219 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.44
HLA-C-210ENST00000640219 NBPF9Q3BBW0 867 aa17.83■□□□□ 0.44
HLA-C-210ENST00000640219 ARMC9Q7Z3E5 817 aa17.83■□□□□ 0.44
HLA-C-210ENST00000640219 ANKIB1Q9P2G1 1089 aa17.83■□□□□ 0.44
HLA-C-210ENST00000640219 GGA1Q9UJY5 639 aa17.83■□□□□ 0.44
HLA-C-210ENST00000640219 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
HLA-C-210ENST00000640219 COL4A1P02462 1669 aa17.83■□□□□ 0.44
HLA-C-210ENST00000640219 DLL1O00548 723 aa17.82■□□□□ 0.44
HLA-C-210ENST00000640219 SPRYD7Q5W111 196 aa17.82■□□□□ 0.44
HLA-C-210ENST00000640219 RBBP6Q7Z6E9 1792 aaKnown RBP17.81■□□□□ 0.44
HLA-C-210ENST00000640219 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 RIPK4P57078 832 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 INHBEP58166 350 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 PRKG1Q13976 671 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 ARMC5Q96C12 935 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 ERO1AQ96HE7 468 aa17.81■□□□□ 0.44
HLA-C-210ENST00000640219 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
HLA-C-210ENST00000640219 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
HLA-C-210ENST00000640219 IFNL1Q8IU54 200 aa17.8■□□□□ 0.44
HLA-C-210ENST00000640219 TMEM106CQ9BVX2 250 aa17.8■□□□□ 0.44
HLA-C-210ENST00000640219 MANSC4A6NHS7 340 aaPredicted RBP17.79■□□□□ 0.44
HLA-C-210ENST00000640219 LDLRAD1Q5T700 205 aa17.79■□□□□ 0.44
HLA-C-210ENST00000640219 KIAA0100Q14667 2235 aaKnown RBP17.79■□□□□ 0.44
HLA-C-210ENST00000640219 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
HLA-C-210ENST00000640219 IRS4O14654 1257 aaPredicted RBP17.78■□□□□ 0.44
HLA-C-210ENST00000640219 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms