RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 MMP14P50281 582 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 ZNF157P51786 506 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-215ENST00000592911 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 NGEFQ8N5V2 710 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 RNF186Q9NXI6 227 aa11.45□□□□□ -0.58
SMAD4-215ENST00000592911 KIF23Q02241 960 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-215ENST00000592911 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
SMAD4-215ENST00000592911 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
SMAD4-215ENST00000592911 WASHC4Q2M389 1173 aa11.44□□□□□ -0.58
SMAD4-215ENST00000592911 NLRP10Q86W26 655 aa11.44□□□□□ -0.58
SMAD4-215ENST00000592911 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
SMAD4-215ENST00000592911 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
SMAD4-215ENST00000592911 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
SMAD4-215ENST00000592911 KIAA0100Q14667 2235 aaKnown RBP11.43□□□□□ -0.58
SMAD4-215ENST00000592911 TCIRG1Q13488 830 aa11.43□□□□□ -0.58
SMAD4-215ENST00000592911 PDIA6Q15084 440 aa11.43□□□□□ -0.58
SMAD4-215ENST00000592911 AGBL3Q8NEM8 1001 aa11.43□□□□□ -0.58
SMAD4-215ENST00000592911 CSRNP1Q96S65 589 aa11.43□□□□□ -0.58
SMAD4-215ENST00000592911 PLEKHF1Q96S99 279 aa11.43□□□□□ -0.58
SMAD4-215ENST00000592911 SCN9AQ15858 1988 aa11.43□□□□□ -0.58
SMAD4-215ENST00000592911 LAMB1P07942 1786 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 RBBP6Q7Z6E9 1792 aaKnown RBP11.42□□□□□ -0.58
SMAD4-215ENST00000592911 PSMD14O00487 310 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 TCERG1O14776 1098 aaKnown RBP11.42□□□□□ -0.58
SMAD4-215ENST00000592911 TRPA1O75762 1119 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 VIL1P09327 827 aaKnown RBP11.42□□□□□ -0.58
SMAD4-215ENST00000592911 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 ZIC5Q96T25 663 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
SMAD4-215ENST00000592911 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
SMAD4-215ENST00000592911 HOXB7P09629 217 aa11.41□□□□□ -0.58
SMAD4-215ENST00000592911 ZNF280AP59817 542 aaPredicted RBP11.41□□□□□ -0.58
SMAD4-215ENST00000592911 KIF4BQ2VIQ3 1234 aa11.41□□□□□ -0.58
SMAD4-215ENST00000592911 POTEHQ6S545 545 aa11.41□□□□□ -0.58
SMAD4-215ENST00000592911 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
SMAD4-215ENST00000592911 TSPYL4Q9UJ04 414 aa11.41□□□□□ -0.58
SMAD4-215ENST00000592911 MAPK8IP3Q9UPT6 1336 aa11.4□□□□□ -0.58
SMAD4-215ENST00000592911 ECE2O60344 883 aa11.4□□□□□ -0.58
SMAD4-215ENST00000592911 SOX10P56693 466 aa11.4□□□□□ -0.58
SMAD4-215ENST00000592911 TRIM28Q13263 835 aaKnown RBP11.4□□□□□ -0.58
SMAD4-215ENST00000592911 SAMD7Q7Z3H4 446 aa11.4□□□□□ -0.58
SMAD4-215ENST00000592911 RASAL3Q86YV0 1011 aa11.4□□□□□ -0.58
SMAD4-215ENST00000592911 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
SMAD4-215ENST00000592911 RTL9Q8NET4 1388 aa11.4□□□□□ -0.59
SMAD4-215ENST00000592911 HCLS1P14317 486 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-215ENST00000592911 TM4SF4P48230 202 aa11.39□□□□□ -0.59
SMAD4-215ENST00000592911 TBC1D10BQ4KMP7 808 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-215ENST00000592911 FBXO46Q6PJ61 603 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-215ENST00000592911 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
SMAD4-215ENST00000592911 CDCA5Q96FF9 252 aa11.39□□□□□ -0.59
SMAD4-215ENST00000592911 GGA3Q9NZ52 723 aa11.39□□□□□ -0.59
SMAD4-215ENST00000592911 HDAC9Q9UKV0 1011 aa11.39□□□□□ -0.59
SMAD4-215ENST00000592911 NSFL1CQ9UNZ2 370 aaKnown RBP11.39□□□□□ -0.59
SMAD4-215ENST00000592911 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
SMAD4-215ENST00000592911 SREBF2Q12772 1141 aa11.38□□□□□ -0.59
SMAD4-215ENST00000592911 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
SMAD4-215ENST00000592911 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
SMAD4-215ENST00000592911 PLBD2Q8NHP8 589 aa11.38□□□□□ -0.59
SMAD4-215ENST00000592911 ZC3H12CQ9C0D7 883 aaKnown RBP11.38□□□□□ -0.59
SMAD4-215ENST00000592911 DBNDD1Q9H9R9 158 aa11.38□□□□□ -0.59
SMAD4-215ENST00000592911 POLLQ9UGP5 575 aa11.38□□□□□ -0.59
SMAD4-215ENST00000592911 SHTN1A0MZ66 631 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 UNCXA6NJT0 531 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 ADM5C9JUS6 153 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 C6orf229H3BNL8 230 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
SMAD4-215ENST00000592911 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 SLC51AQ86UW1 340 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 TBC1D16Q8TBP0 767 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
SMAD4-215ENST00000592911 MYO3BQ8WXR4 1341 aa11.36□□□□□ -0.59
SMAD4-215ENST00000592911 EGFRP00533 1210 aa11.36□□□□□ -0.59
SMAD4-215ENST00000592911 INHBEP58166 350 aa11.36□□□□□ -0.59
SMAD4-215ENST00000592911 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-215ENST00000592911 XAGE3Q8WTP9 111 aa11.36□□□□□ -0.59
SMAD4-215ENST00000592911 GMLQ99445 158 aa11.36□□□□□ -0.59
SMAD4-215ENST00000592911 COL1A1P02452 1464 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-215ENST00000592911 MYH3P11055 1940 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 USP17L8P0C7I0 530 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 EIF2S2P20042 333 aaKnown RBP11.35□□□□□ -0.59
SMAD4-215ENST00000592911 NF2P35240 595 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 GPSM2P81274 684 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 PROSER3Q2NL68 480 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-215ENST00000592911 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
SMAD4-215ENST00000592911 THUMPD2Q9BTF0 503 aaKnown RBP11.35□□□□□ -0.59
SMAD4-215ENST00000592911 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 DBF4Q9UBU7 674 aaPredicted RBP11.35□□□□□ -0.59
SMAD4-215ENST00000592911 GGA1Q9UJY5 639 aa11.35□□□□□ -0.59
SMAD4-215ENST00000592911 MKI67P46013 3256 aaKnown RBP11.34□□□□□ -0.59
SMAD4-215ENST00000592911 G3V3G9 751 aa11.34□□□□□ -0.59
SMAD4-215ENST00000592911 GPR25O00155 361 aa11.34□□□□□ -0.59
SMAD4-215ENST00000592911 SCARF1Q14162 830 aa11.34□□□□□ -0.59
SMAD4-215ENST00000592911 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
SMAD4-215ENST00000592911 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
SMAD4-215ENST00000592911 MYOZ2Q9NPC6 264 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 1379.8 ms