RNA–Protein interactions for RNA: ENST00000590212.1

SNRPD2-208, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 454 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-208ENST00000590212 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 GPSM2P81274 684 aa12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 TCIRG1Q13488 830 aa12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 SCARF1Q14162 830 aa12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 PROSER3Q2NL68 480 aa12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 SCN9AQ15858 1988 aa12.79□□□□□ -0.36
SNRPD2-208ENST00000590212 TM4SF4P48230 202 aa12.78□□□□□ -0.36
SNRPD2-208ENST00000590212 ZNF280AP59817 542 aaPredicted RBP12.78□□□□□ -0.36
SNRPD2-208ENST00000590212 COPS6Q7L5N1 327 aa12.78□□□□□ -0.36
SNRPD2-208ENST00000590212 FKTNO75072 461 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 MOB2Q70IA6 237 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 AGBL3Q8NEM8 1001 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 TBC1D16Q8TBP0 767 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 XAGE3Q8WTP9 111 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 PITPNM2Q9BZ72 1349 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 ZNF609O15014 1411 aa12.77□□□□□ -0.37
SNRPD2-208ENST00000590212 G3V3G9 751 aa12.76□□□□□ -0.37
SNRPD2-208ENST00000590212 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
SNRPD2-208ENST00000590212 SF3B3Q15393 1217 aaKnown RBP12.76□□□□□ -0.37
SNRPD2-208ENST00000590212 NFE2L2Q16236 605 aa12.76□□□□□ -0.37
SNRPD2-208ENST00000590212 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
SNRPD2-208ENST00000590212 CFHR5Q9BXR6 569 aa12.76□□□□□ -0.37
SNRPD2-208ENST00000590212 COL4A1P02462 1669 aa12.75□□□□□ -0.37
SNRPD2-208ENST00000590212 SREBF2Q12772 1141 aa12.75□□□□□ -0.37
SNRPD2-208ENST00000590212 RSBN1LQ6PCB5 846 aaPredicted RBP12.75□□□□□ -0.37
SNRPD2-208ENST00000590212 NECTIN2Q92692 538 aa12.75□□□□□ -0.37
SNRPD2-208ENST00000590212 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
SNRPD2-208ENST00000590212 PSME4Q14997 1843 aa12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 USP17L8P0C7I0 530 aa12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 RPS8P62241 208 aaKnown RBP12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 TTLL12Q14166 644 aaPredicted RBP12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 ZNF428Q96B54 188 aa12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 FAM89AQ96GI7 184 aa12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 PLEKHF1Q96S99 279 aa12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
SNRPD2-208ENST00000590212 KIAA0100Q14667 2235 aaKnown RBP12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 UFL1O94874 794 aa12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 NF2P35240 595 aa12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 GMLQ99445 158 aa12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
SNRPD2-208ENST00000590212 RBBP6Q7Z6E9 1792 aaKnown RBP12.72□□□□□ -0.37
SNRPD2-208ENST00000590212 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
SNRPD2-208ENST00000590212 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
SNRPD2-208ENST00000590212 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
SNRPD2-208ENST00000590212 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
SNRPD2-208ENST00000590212 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
SNRPD2-208ENST00000590212 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
SNRPD2-208ENST00000590212 ALDH1A1P00352 501 aa12.71□□□□□ -0.37
SNRPD2-208ENST00000590212 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.37
SNRPD2-208ENST00000590212 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
SNRPD2-208ENST00000590212 TRIM17Q9Y577 477 aa12.71□□□□□ -0.37
SNRPD2-208ENST00000590212 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 NBPF9Q3BBW0 867 aa12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 RTL5Q5HYW3 569 aaPredicted RBP12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 PNNQ9H307 717 aaKnown RBP12.7□□□□□ -0.38
SNRPD2-208ENST00000590212 ATP5J2-PTCD1G3V325 749 aa12.69□□□□□ -0.38
SNRPD2-208ENST00000590212 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
SNRPD2-208ENST00000590212 SPRYD7Q5W111 196 aa12.69□□□□□ -0.38
SNRPD2-208ENST00000590212 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
SNRPD2-208ENST00000590212 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
SNRPD2-208ENST00000590212 PODNQ7Z5L7 613 aa12.69□□□□□ -0.38
SNRPD2-208ENST00000590212 INHBEP58166 350 aa12.68□□□□□ -0.38
SNRPD2-208ENST00000590212 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
SNRPD2-208ENST00000590212 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
SNRPD2-208ENST00000590212 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
SNRPD2-208ENST00000590212 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
SNRPD2-208ENST00000590212 MKI67P46013 3256 aaKnown RBP12.68□□□□□ -0.38
SNRPD2-208ENST00000590212 XDHP47989 1333 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 CEP290O15078 2479 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 WNT10BO00744 389 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 PRKG1Q13976 671 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 LDLRAD1Q5T700 205 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 ERO1AQ96HE7 468 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 HTTP42858 3142 aa12.67□□□□□ -0.38
SNRPD2-208ENST00000590212 TRIOBPQ9H2D6 2365 aa12.66□□□□□ -0.38
SNRPD2-208ENST00000590212 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
SNRPD2-208ENST00000590212 RIPK4P57078 832 aa12.66□□□□□ -0.38
SNRPD2-208ENST00000590212 ARMC5Q96C12 935 aa12.66□□□□□ -0.38
SNRPD2-208ENST00000590212 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
SNRPD2-208ENST00000590212 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
SNRPD2-208ENST00000590212 MYO3BQ8WXR4 1341 aa12.65□□□□□ -0.38
SNRPD2-208ENST00000590212 ATP2B4P23634 1241 aa12.65□□□□□ -0.38
SNRPD2-208ENST00000590212 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms