RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 CELF1Q92879 486 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-213ENST00000579605 EYA3Q99504 573 aa17.46■□□□□ 0.39
CDK5RAP3-213ENST00000579605 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-213ENST00000579605 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-213ENST00000579605 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-213ENST00000579605 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-213ENST00000579605 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
CDK5RAP3-213ENST00000579605 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
CDK5RAP3-213ENST00000579605 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-213ENST00000579605 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-213ENST00000579605 SREBF2Q12772 1141 aa17.43■□□□□ 0.38
CDK5RAP3-213ENST00000579605 PRKG1Q13976 671 aa17.43■□□□□ 0.38
CDK5RAP3-213ENST00000579605 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
CDK5RAP3-213ENST00000579605 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
CDK5RAP3-213ENST00000579605 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-213ENST00000579605 DLL1O00548 723 aa17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 ZNF280AP59817 542 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 PDIA6Q15084 440 aa17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 HSP90AB3PQ58FF7 597 aa17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 OTOP1Q7RTM1 612 aa17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 MYOZ2Q9NPC6 264 aa17.42■□□□□ 0.38
CDK5RAP3-213ENST00000579605 MKI67P46013 3256 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-213ENST00000579605 RSBN1LQ6PCB5 846 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-213ENST00000579605 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
CDK5RAP3-213ENST00000579605 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
CDK5RAP3-213ENST00000579605 ERBB4Q15303 1308 aa17.41■□□□□ 0.38
CDK5RAP3-213ENST00000579605 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
CDK5RAP3-213ENST00000579605 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
CDK5RAP3-213ENST00000579605 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
CDK5RAP3-213ENST00000579605 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
CDK5RAP3-213ENST00000579605 PTPN12Q05209 780 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-213ENST00000579605 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-213ENST00000579605 AGBL3Q8NEM8 1001 aa17.39■□□□□ 0.37
CDK5RAP3-213ENST00000579605 PAPPA2Q9BXP8 1791 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 UFL1O94874 794 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 NEFMP07197 916 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 NF2P35240 595 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 NBPF9Q3BBW0 867 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 CFHR5Q9BXR6 569 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 ANKIB1Q9P2G1 1089 aa17.38■□□□□ 0.37
CDK5RAP3-213ENST00000579605 TAF1P21675 1872 aa17.37■□□□□ 0.37
CDK5RAP3-213ENST00000579605 SLC17A8Q8NDX2 589 aa17.37■□□□□ 0.37
CDK5RAP3-213ENST00000579605 PTPN22Q9Y2R2 807 aa17.37■□□□□ 0.37
CDK5RAP3-213ENST00000579605 PITPNM2Q9BZ72 1349 aa17.37■□□□□ 0.37
CDK5RAP3-213ENST00000579605 ALDH1A1P00352 501 aa17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 RPS8P62241 208 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 ARMC9Q7Z3E5 817 aa17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 CD99L2Q8TCZ2 262 aa17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 TMEM106CQ9BVX2 250 aa17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
CDK5RAP3-213ENST00000579605 H0YGN5 161 aa17.35■□□□□ 0.37
CDK5RAP3-213ENST00000579605 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
CDK5RAP3-213ENST00000579605 GMLQ99445 158 aa17.35■□□□□ 0.37
CDK5RAP3-213ENST00000579605 GGA1Q9UJY5 639 aa17.35■□□□□ 0.37
CDK5RAP3-213ENST00000579605 FZD1Q9UP38 647 aa17.35■□□□□ 0.37
CDK5RAP3-213ENST00000579605 LAMB2P55268 1798 aa17.35■□□□□ 0.37
CDK5RAP3-213ENST00000579605 IFNL1Q8IU54 200 aa17.34■□□□□ 0.37
CDK5RAP3-213ENST00000579605 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.37
CDK5RAP3-213ENST00000579605 USP17L3A6NCW0 530 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 USP17L4A6NCW7 530 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 MYCP01106 439 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 USP17L1Q7RTZ2 530 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 FBXW7Q969H0 707 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 ERO1AQ96HE7 468 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 MXD3Q9BW11 206 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 EFCC1Q9HA90 598 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 ANGEL1Q9UNK9 670 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-213ENST00000579605 MANSC4A6NHS7 340 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-213ENST00000579605 PPP2R1AP30153 589 aa17.32■□□□□ 0.36
CDK5RAP3-213ENST00000579605 CHRDL2Q6WN34 429 aa17.32■□□□□ 0.36
CDK5RAP3-213ENST00000579605 ARMC5Q96C12 935 aa17.32■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
CDK5RAP3-213ENST00000579605 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
CDK5RAP3-213ENST00000579605 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDK5RAP3-213ENST00000579605 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-213ENST00000579605 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SLC4A8Q2Y0W8 1093 aa17.31■□□□□ 0.36
CDK5RAP3-213ENST00000579605 OTUD5Q96G74 571 aa17.31■□□□□ 0.36
CDK5RAP3-213ENST00000579605 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 COL4A1P02462 1669 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 WNT10BO00744 389 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SASH1O94885 1247 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 INHBEP58166 350 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SZT2Q5T011 3432 aa17.29■□□□□ 0.36
CDK5RAP3-213ENST00000579605 HTTP42858 3142 aa17.29■□□□□ 0.36
CDK5RAP3-213ENST00000579605 CRHR2Q13324 411 aa17.28■□□□□ 0.36
CDK5RAP3-213ENST00000579605 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
CDK5RAP3-213ENST00000579605 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
CDK5RAP3-213ENST00000579605 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 CAP1Q01518 475 aa17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SP3Q02447 781 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms