RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 FBXO46Q6PJ61 603 aaPredicted RBP14.85□□□□□ -0.03
SUPT4H1-203ENST00000579289 PNISRQ8TF01 805 aaKnown RBP14.85□□□□□ -0.03
SUPT4H1-203ENST00000579289 PSME4Q14997 1843 aa14.85□□□□□ -0.03
SUPT4H1-203ENST00000579289 RANBP2P49792 3224 aaKnown RBP14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 RIMBP2O15034 1052 aa14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 TCIRG1Q13488 830 aa14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 SF3B3Q15393 1217 aaKnown RBP14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 DDX46Q7L014 1031 aaKnown RBP14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 TMC4Q7Z404 712 aa14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 TBC1D16Q8TBP0 767 aa14.84□□□□□ -0.03
SUPT4H1-203ENST00000579289 POTEFA5A3E0 1075 aa14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 FKBP1BP68106 108 aa14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 SCARF1Q14162 830 aa14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 ANGEL2Q5VTE6 544 aaKnown RBP14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 GCC1Q96CN9 775 aa14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 TMX4Q9H1E5 349 aaPredicted RBP14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 NSFL1CQ9UNZ2 370 aaKnown RBP14.83□□□□□ -0.04
SUPT4H1-203ENST00000579289 CAP1Q01518 475 aa14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 COPS6Q7L5N1 327 aa14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 SULF1Q8IWU6 871 aa14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 PODXL2Q9NZ53 605 aa14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 SCAF8Q9UPN6 1271 aaKnown RBP14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 NUDCQ9Y266 331 aa14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 SH3TC1Q8TE82 1336 aa14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 RBBP6Q7Z6E9 1792 aaKnown RBP14.82□□□□□ -0.04
SUPT4H1-203ENST00000579289 UBE2Q2LH0YL09 131 aa14.81□□□□□ -0.04
SUPT4H1-203ENST00000579289 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
SUPT4H1-203ENST00000579289 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
SUPT4H1-203ENST00000579289 ISCA1Q9BUE6 129 aa14.81□□□□□ -0.04
SUPT4H1-203ENST00000579289 TRMT112Q9UI30 125 aaKnown RBP14.81□□□□□ -0.04
SUPT4H1-203ENST00000579289 PRAMEF18Q5VWM3 479 aa14.8□□□□□ -0.04
SUPT4H1-203ENST00000579289 XAGE3Q8WTP9 111 aa14.8□□□□□ -0.04
SUPT4H1-203ENST00000579289 PITPNM2Q9BZ72 1349 aa14.8□□□□□ -0.04
SUPT4H1-203ENST00000579289 LAMB1P07942 1786 aa14.79□□□□□ -0.04
SUPT4H1-203ENST00000579289 NFE2L2Q16236 605 aa14.79□□□□□ -0.04
SUPT4H1-203ENST00000579289 RSBN1LQ6PCB5 846 aaPredicted RBP14.79□□□□□ -0.04
SUPT4H1-203ENST00000579289 WTIPA6NIX2 430 aaPredicted RBP14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 EIF2S2P20042 333 aaKnown RBP14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 HSP90AB3PQ58FF7 597 aa14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 AGBL3Q8NEM8 1001 aa14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 FAM89AQ96GI7 184 aa14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 HDAC9Q9UKV0 1011 aa14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 COL6A3P12111 3177 aa14.78□□□□□ -0.04
SUPT4H1-203ENST00000579289 C6orf229H3BNL8 230 aa14.77□□□□□ -0.05
SUPT4H1-203ENST00000579289 FKTNO75072 461 aa14.77□□□□□ -0.05
SUPT4H1-203ENST00000579289 NBPF9Q3BBW0 867 aa14.77□□□□□ -0.05
SUPT4H1-203ENST00000579289 LDLRAD1Q5T700 205 aa14.77□□□□□ -0.05
SUPT4H1-203ENST00000579289 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
SUPT4H1-203ENST00000579289 KRT24Q2M2I5 525 aa14.76□□□□□ -0.05
SUPT4H1-203ENST00000579289 NECTIN2Q92692 538 aa14.76□□□□□ -0.05
SUPT4H1-203ENST00000579289 MYOZ2Q9NPC6 264 aa14.76□□□□□ -0.05
SUPT4H1-203ENST00000579289 A0A0C4DFX4 3053 aa14.76□□□□□ -0.05
SUPT4H1-203ENST00000579289 RPS8P62241 208 aaKnown RBP14.75□□□□□ -0.05
SUPT4H1-203ENST00000579289 AIMP1Q12904 312 aaKnown RBP14.75□□□□□ -0.05
SUPT4H1-203ENST00000579289 OTOP1Q7RTM1 612 aa14.75□□□□□ -0.05
SUPT4H1-203ENST00000579289 SEC31BQ9NQW1 1179 aa14.75□□□□□ -0.05
SUPT4H1-203ENST00000579289 KIAA0100Q14667 2235 aaKnown RBP14.74□□□□□ -0.05
SUPT4H1-203ENST00000579289 ZBED3Q96IU2 234 aaPredicted RBP14.74□□□□□ -0.05
SUPT4H1-203ENST00000579289 EYA3Q99504 573 aa14.74□□□□□ -0.05
SUPT4H1-203ENST00000579289 WNT10BO00744 389 aa14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 USP17L8P0C7I0 530 aa14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 EN2P19622 333 aaPredicted RBP14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 TRIM28Q13263 835 aaKnown RBP14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 ARMC5Q96C12 935 aa14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 OTUD5Q96G74 571 aa14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 BABAM1Q9NWV8 329 aa14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 TSPYL4Q9UJ04 414 aa14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 COLQQ9Y215 455 aaPredicted RBP14.73□□□□□ -0.05
SUPT4H1-203ENST00000579289 LAMA3Q16787 3333 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 ATP5J2-PTCD1G3V325 749 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 SPRYD7Q5W111 196 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 INTS3Q68E01 1043 aaKnown RBP14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 PLBD2Q8NHP8 589 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 MXD3Q9BW11 206 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 FZD1Q9UP38 647 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 SSC5DA1L4H1 1573 aa14.72□□□□□ -0.05
SUPT4H1-203ENST00000579289 IGF2BP3O00425 579 aaKnown RBP eCLIP14.71□□□□□ -0.05
SUPT4H1-203ENST00000579289 UFL1O94874 794 aa14.71□□□□□ -0.05
SUPT4H1-203ENST00000579289 DACT2Q5SW24 774 aa14.71□□□□□ -0.05
SUPT4H1-203ENST00000579289 CHPF2Q9P2E5 772 aa14.71□□□□□ -0.05
SUPT4H1-203ENST00000579289 PTPN22Q9Y2R2 807 aa14.71□□□□□ -0.05
SUPT4H1-203ENST00000579289 IRS4O14654 1257 aaPredicted RBP14.7□□□□□ -0.06
SUPT4H1-203ENST00000579289 ANKRD13DQ6ZTN6 518 aa14.7□□□□□ -0.06
SUPT4H1-203ENST00000579289 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
SUPT4H1-203ENST00000579289 TRIM17Q9Y577 477 aa14.7□□□□□ -0.06
SUPT4H1-203ENST00000579289 SREBF2Q12772 1141 aa14.69□□□□□ -0.06
SUPT4H1-203ENST00000579289 MAP3K11Q16584 847 aa14.69□□□□□ -0.06
SUPT4H1-203ENST00000579289 RTL5Q5HYW3 569 aaPredicted RBP14.69□□□□□ -0.06
SUPT4H1-203ENST00000579289 PODNQ7Z5L7 613 aa14.69□□□□□ -0.06
SUPT4H1-203ENST00000579289 GGA1Q9UJY5 639 aa14.69□□□□□ -0.06
SUPT4H1-203ENST00000579289 TRIOBPQ9H2D6 2365 aa14.69□□□□□ -0.06
SUPT4H1-203ENST00000579289 USP17L3A6NCW0 530 aa14.68□□□□□ -0.06
SUPT4H1-203ENST00000579289 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
SUPT4H1-203ENST00000579289 CHL1O00533 1208 aa14.68□□□□□ -0.06
SUPT4H1-203ENST00000579289 GJA5P36382 358 aa14.68□□□□□ -0.06
SUPT4H1-203ENST00000579289 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
SUPT4H1-203ENST00000579289 CEP290O15078 2479 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms