RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ARHGAP4P98171 946 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 HYAL2Q12891 473 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 LINC00114Q6XXX2 140 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 C20orf204Q6ZNR8 217 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 GJD3Q8N144 294 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 KCTD17Q8N5Z5 321 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 TMEM63CQ9P1W3 806 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 BIN2Q9UBW5 565 aaPredicted RBP8.86□□□□□ -0.99
LINC00254-201ENST00000563416 NAGPAQ9UK23 515 aa8.86□□□□□ -0.99
LINC00254-201ENST00000563416 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
LINC00254-201ENST00000563416 HFE2Q6ZVN8 426 aa8.85□□□□□ -0.99
LINC00254-201ENST00000563416 ALYREFQ86V81 257 aaKnown RBP8.85□□□□□ -0.99
LINC00254-201ENST00000563416 NUDT8Q8WV74 236 aa8.85□□□□□ -0.99
LINC00254-201ENST00000563416 CITED4Q96RK1 184 aa8.85□□□□□ -0.99
LINC00254-201ENST00000563416 A6NHS1 94 aa8.84□□□□□ -0.99
LINC00254-201ENST00000563416 ECM1Q16610 540 aa8.84□□□□□ -0.99
LINC00254-201ENST00000563416 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
LINC00254-201ENST00000563416 SNX29Q8TEQ0 813 aa8.84□□□□□ -0.99
LINC00254-201ENST00000563416 CES1P23141 567 aa8.83□□□□□ -1
LINC00254-201ENST00000563416 AEBP1Q8IUX7 1158 aa8.83□□□□□ -1
LINC00254-201ENST00000563416 TTC9Q92623 222 aa8.83□□□□□ -1
LINC00254-201ENST00000563416 LPIN3Q9BQK8 851 aa8.83□□□□□ -1
LINC00254-201ENST00000563416 SMG9Q9H0W8 520 aaKnown RBP8.83□□□□□ -1
LINC00254-201ENST00000563416 J3QW42 95 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 TNFRSF21O75509 655 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 NEFLP07196 543 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 RASSF7Q02833 373 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 NCAPG2Q86XI2 1143 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 TMC1Q8TDI8 760 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 PLD4Q96BZ4 506 aa8.82□□□□□ -1
LINC00254-201ENST00000563416 PHACTR2O75167 634 aa8.81□□□□□ -1
LINC00254-201ENST00000563416 KIF4AO95239 1232 aa8.81□□□□□ -1
LINC00254-201ENST00000563416 C8orf86Q6ZUL3 223 aa8.81□□□□□ -1
LINC00254-201ENST00000563416 PLVAPQ9BX97 442 aa8.81□□□□□ -1
LINC00254-201ENST00000563416 GDF11O95390 407 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 CYP2E1P05181 493 aaPredicted RBP8.8□□□□□ -1
LINC00254-201ENST00000563416 NID1P14543 1247 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 AFF1P51825 1210 aaKnown RBP8.8□□□□□ -1
LINC00254-201ENST00000563416 PRRT3Q5FWE3 981 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 TMEM151AQ8N4L1 468 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 C1orf127Q8N9H9 656 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 TRIM11Q96F44 468 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 CNTN3Q9P232 1028 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
LINC00254-201ENST00000563416 SMNDC1O75940 238 aaKnown RBP eCLIP8.79□□□□□ -1
LINC00254-201ENST00000563416 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
LINC00254-201ENST00000563416 CACTIN-AS1Q8N1I8 211 aa8.79□□□□□ -1
LINC00254-201ENST00000563416 FAM129BQ96TA1 746 aa8.79□□□□□ -1
LINC00254-201ENST00000563416 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
LINC00254-201ENST00000563416 SUV39H2Q9H5I1 410 aa8.79□□□□□ -1
LINC00254-201ENST00000563416 KANSL3Q9P2N6 904 aa8.79□□□□□ -1
LINC00254-201ENST00000563416 COL9A3Q14050 684 aaPredicted RBP8.78□□□□□ -1
LINC00254-201ENST00000563416 COL13A1Q5TAT6 717 aaPredicted RBP8.78□□□□□ -1
LINC00254-201ENST00000563416 DMRTB1Q96MA1 342 aa8.78□□□□□ -1
LINC00254-201ENST00000563416 FOXD3Q9UJU5 478 aaPredicted RBP8.78□□□□□ -1
LINC00254-201ENST00000563416 EDN3P14138 238 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 GSK3AP49840 483 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 TRIM28Q13263 835 aaKnown RBP8.77□□□□□ -1.01
LINC00254-201ENST00000563416 MSL1Q68DK7 614 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 WFDC8Q8IUA0 241 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 CHRDQ9H2X0 955 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 SALL4Q9UJQ4 1053 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 AMOTL2Q9Y2J4 779 aa8.77□□□□□ -1.01
LINC00254-201ENST00000563416 FAM177BA6PVY3 158 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 SPATA31C1P0DKV0 1188 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 COL8A1P27658 744 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 MAPK1P28482 360 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 RAC1P63000 192 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 CEP120Q8N960 986 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
LINC00254-201ENST00000563416 EREGO14944 169 aa8.75□□□□□ -1.01
LINC00254-201ENST00000563416 ATP11AP98196 1134 aa8.75□□□□□ -1.01
LINC00254-201ENST00000563416 GRIK5Q16478 980 aa8.75□□□□□ -1.01
LINC00254-201ENST00000563416 GDF6Q6KF10 455 aaPredicted RBP8.75□□□□□ -1.01
LINC00254-201ENST00000563416 PBX4Q9BYU1 374 aa8.75□□□□□ -1.01
LINC00254-201ENST00000563416 RASSF4Q9H2L5 321 aa8.75□□□□□ -1.01
LINC00254-201ENST00000563416 ZFYVE28Q9HCC9 887 aa8.75□□□□□ -1.01
LINC00254-201ENST00000563416 ZSCAN29Q8IWY8 852 aaPredicted RBP8.74□□□□□ -1.01
LINC00254-201ENST00000563416 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
LINC00254-201ENST00000563416 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
LINC00254-201ENST00000563416 DTWD1Q8N5C7 304 aa8.74□□□□□ -1.01
LINC00254-201ENST00000563416 ALKBH8Q96BT7 664 aaKnown RBP8.74□□□□□ -1.01
LINC00254-201ENST00000563416 MUC3BQ9H195 1237 aa8.74□□□□□ -1.01
LINC00254-201ENST00000563416 CPNE3O75131 537 aaKnown RBP8.73□□□□□ -1.01
LINC00254-201ENST00000563416 TRIM33Q9UPN9 1127 aa8.73□□□□□ -1.01
LINC00254-201ENST00000563416 A0A0A0MRY4 1105 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 GPR182O15218 404 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 APBA3O96018 575 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 IL22RA1Q8N6P7 574 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 NACC1Q96RE7 527 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 DNAJC25Q9H1X3 360 aa8.72□□□□□ -1.01
LINC00254-201ENST00000563416 ELNP15502 786 aa8.71□□□□□ -1.02
LINC00254-201ENST00000563416 PTPRAP18433 802 aa8.71□□□□□ -1.02
LINC00254-201ENST00000563416 OSMRQ99650 979 aa8.71□□□□□ -1.02
LINC00254-201ENST00000563416 SRA1Q9HD15 236 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms