RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SIK1P57059 783 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 GPLD1P80108 840 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 PCSK7Q16549 785 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 TRIM11Q96F44 468 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 PLVAPQ9BX97 442 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 ABI2Q9NYB9 513 aaPredicted RBP10.96□□□□□ -0.65
SMG1-204ENST00000561940 CNTN3Q9P232 1028 aa10.96□□□□□ -0.65
SMG1-204ENST00000561940 SOWAHDA6NJG2 315 aa10.95□□□□□ -0.66
SMG1-204ENST00000561940 LILRB5O75023 590 aa10.95□□□□□ -0.66
SMG1-204ENST00000561940 CCDC27Q2M243 656 aa10.95□□□□□ -0.66
SMG1-204ENST00000561940 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
SMG1-204ENST00000561940 COL8A1P27658 744 aa10.94□□□□□ -0.66
SMG1-204ENST00000561940 COL9A3Q14050 684 aaPredicted RBP10.94□□□□□ -0.66
SMG1-204ENST00000561940 TMEM151AQ8N4L1 468 aa10.94□□□□□ -0.66
SMG1-204ENST00000561940 OR13H1Q8NG92 308 aa10.94□□□□□ -0.66
SMG1-204ENST00000561940 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
SMG1-204ENST00000561940 LPIN3Q9BQK8 851 aa10.94□□□□□ -0.66
SMG1-204ENST00000561940 SMG9Q9H0W8 520 aaKnown RBP10.94□□□□□ -0.66
SMG1-204ENST00000561940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.94□□□□□ -0.66
SMG1-204ENST00000561940 RPLP1P05386 114 aaKnown RBP10.93□□□□□ -0.66
SMG1-204ENST00000561940 ARHGAP4P98171 946 aa10.93□□□□□ -0.66
SMG1-204ENST00000561940 PDE12Q6L8Q7 609 aaKnown RBP10.93□□□□□ -0.66
SMG1-204ENST00000561940 C1orf127Q8N9H9 656 aa10.93□□□□□ -0.66
SMG1-204ENST00000561940 KANSL3Q9P2N6 904 aa10.93□□□□□ -0.66
SMG1-204ENST00000561940 BRPF3Q9ULD4 1205 aa10.93□□□□□ -0.66
SMG1-204ENST00000561940 GHRHP01286 108 aa10.92□□□□□ -0.66
SMG1-204ENST00000561940 AFF1P51825 1210 aaKnown RBP10.92□□□□□ -0.66
SMG1-204ENST00000561940 FAM229AH3BQW9 127 aa10.91□□□□□ -0.66
SMG1-204ENST00000561940 SOX18P35713 384 aa10.91□□□□□ -0.66
SMG1-204ENST00000561940 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
SMG1-204ENST00000561940 NPM2Q86SE8 214 aaKnown RBP10.91□□□□□ -0.66
SMG1-204ENST00000561940 PLD4Q96BZ4 506 aa10.91□□□□□ -0.66
SMG1-204ENST00000561940 DCAF5Q96JK2 942 aa10.91□□□□□ -0.66
SMG1-204ENST00000561940 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
SMG1-204ENST00000561940 PIK3R2O00459 728 aa10.9□□□□□ -0.66
SMG1-204ENST00000561940 NID1P14543 1247 aa10.9□□□□□ -0.66
SMG1-204ENST00000561940 HYAL2Q12891 473 aa10.9□□□□□ -0.66
SMG1-204ENST00000561940 XKR5Q6UX68 686 aa10.9□□□□□ -0.66
SMG1-204ENST00000561940 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
SMG1-204ENST00000561940 USP5P45974 858 aa10.89□□□□□ -0.67
SMG1-204ENST00000561940 NCAPG2Q86XI2 1143 aa10.89□□□□□ -0.67
SMG1-204ENST00000561940 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
SMG1-204ENST00000561940 CES1P23141 567 aa10.88□□□□□ -0.67
SMG1-204ENST00000561940 GDF6Q6KF10 455 aaPredicted RBP10.88□□□□□ -0.67
SMG1-204ENST00000561940 TMC1Q8TDI8 760 aa10.88□□□□□ -0.67
SMG1-204ENST00000561940 SPACA7Q96KW9 195 aa10.88□□□□□ -0.67
SMG1-204ENST00000561940 RBSNQ9H1K0 784 aa10.88□□□□□ -0.67
SMG1-204ENST00000561940 PRDM6Q9NQX0 595 aa10.88□□□□□ -0.67
SMG1-204ENST00000561940 NOP53Q9NZM5 478 aaKnown RBP10.88□□□□□ -0.67
SMG1-204ENST00000561940 TNFRSF21O75509 655 aa10.87□□□□□ -0.67
SMG1-204ENST00000561940 ATP11AP98196 1134 aa10.87□□□□□ -0.67
SMG1-204ENST00000561940 GRIK5Q16478 980 aa10.87□□□□□ -0.67
SMG1-204ENST00000561940 GJD3Q8N144 294 aa10.87□□□□□ -0.67
SMG1-204ENST00000561940 FRRS1LQ9P0K9 344 aa10.87□□□□□ -0.67
SMG1-204ENST00000561940 KRBA1A5PL33 1030 aa10.86□□□□□ -0.67
SMG1-204ENST00000561940 NDUFB5O43674 189 aa10.86□□□□□ -0.67
SMG1-204ENST00000561940 HOXD8P13378 290 aaPredicted RBP10.86□□□□□ -0.67
SMG1-204ENST00000561940 ACPPP15309 386 aa10.86□□□□□ -0.67
SMG1-204ENST00000561940 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
SMG1-204ENST00000561940 CHRDQ9H2X0 955 aa10.86□□□□□ -0.67
SMG1-204ENST00000561940 EREGO14944 169 aa10.85□□□□□ -0.67
SMG1-204ENST00000561940 PHACTR2O75167 634 aa10.85□□□□□ -0.67
SMG1-204ENST00000561940 TRPA1O75762 1119 aa10.85□□□□□ -0.67
SMG1-204ENST00000561940 EHHADHQ08426 723 aa10.85□□□□□ -0.67
SMG1-204ENST00000561940 RASSF4Q9H2L5 321 aa10.85□□□□□ -0.67
SMG1-204ENST00000561940 TRIM33Q9UPN9 1127 aa10.85□□□□□ -0.67
SMG1-204ENST00000561940 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
SMG1-204ENST00000561940 CEP135Q66GS9 1140 aa10.84□□□□□ -0.67
SMG1-204ENST00000561940 MSL1Q68DK7 614 aa10.84□□□□□ -0.67
SMG1-204ENST00000561940 LOC100996750A0A140TA64 210 aa10.83□□□□□ -0.68
SMG1-204ENST00000561940 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
SMG1-204ENST00000561940 KIF4AO95239 1232 aa10.83□□□□□ -0.68
SMG1-204ENST00000561940 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.68
SMG1-204ENST00000561940 KRTAP4-6Q9BYQ5 205 aa10.83□□□□□ -0.68
SMG1-204ENST00000561940 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
SMG1-204ENST00000561940 SALL4Q9UJQ4 1053 aa10.83□□□□□ -0.68
SMG1-204ENST00000561940 GRIK4Q16099 956 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 PRRT3Q5FWE3 981 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 WFDC8Q8IUA0 241 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 IL22RA1Q8N6P7 574 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 CEP120Q8N960 986 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 SNX29Q8TEQ0 813 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 TTC9Q92623 222 aa10.82□□□□□ -0.68
SMG1-204ENST00000561940 A0A0A0MRY4 1105 aa10.81□□□□□ -0.68
SMG1-204ENST00000561940 CDC25BP30305 580 aa10.81□□□□□ -0.68
SMG1-204ENST00000561940 PLA2G4EQ3MJ16 856 aa10.81□□□□□ -0.68
SMG1-204ENST00000561940 GPAT2Q6NUI2 795 aa10.81□□□□□ -0.68
SMG1-204ENST00000561940 DNAJC14Q6Y2X3 702 aaPredicted RBP10.81□□□□□ -0.68
SMG1-204ENST00000561940 PMEPA1Q969W9 287 aa10.81□□□□□ -0.68
SMG1-204ENST00000561940 ADAMTSL4Q6UY14 1074 aa10.8□□□□□ -0.68
SMG1-204ENST00000561940 PBX4Q9BYU1 374 aa10.8□□□□□ -0.68
SMG1-204ENST00000561940 NIF3L1Q9GZT8 377 aa10.8□□□□□ -0.68
SMG1-204ENST00000561940 ZFYVE28Q9HCC9 887 aa10.8□□□□□ -0.68
SMG1-204ENST00000561940 SMNDC1O75940 238 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMG1-204ENST00000561940 ORC1Q13415 861 aa10.79□□□□□ -0.68
SMG1-204ENST00000561940 USPL1Q5W0Q7 1092 aa10.79□□□□□ -0.68
SMG1-204ENST00000561940 HHIPQ96QV1 700 aa10.79□□□□□ -0.68
SMG1-204ENST00000561940 ITGB2P05107 769 aa10.78□□□□□ -0.68
SMG1-204ENST00000561940 SPATA31C1P0DKV0 1188 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms