RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KCNA6P17658 529 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 BAG6P46379 1132 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 PCBP4P57723 403 aaKnown RBP6.35□□□□□ -1.39
HERC1-211ENST00000560983 GRIN2CQ14957 1233 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 TXNDC2Q86VQ3 553 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 TNFRSF25Q93038 417 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 TRIM11Q96F44 468 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 KIF14Q15058 1648 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 SAMD9LQ8IVG5 1584 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 UGGT1Q9NYU2 1555 aa6.35□□□□□ -1.39
HERC1-211ENST00000560983 PZPP20742 1482 aa6.34□□□□□ -1.39
HERC1-211ENST00000560983 NLRP1Q9C000 1473 aa6.34□□□□□ -1.39
HERC1-211ENST00000560983 POLR1AO95602 1720 aaPredicted RBP6.34□□□□□ -1.39
HERC1-211ENST00000560983 SFSWAPQ12872 951 aaKnown RBP6.34□□□□□ -1.39
HERC1-211ENST00000560983 COL9A3Q14050 684 aaPredicted RBP6.34□□□□□ -1.39
HERC1-211ENST00000560983 CD163Q86VB7 1156 aa6.34□□□□□ -1.39
HERC1-211ENST00000560983 PROSER2Q86WR7 435 aaPredicted RBP6.34□□□□□ -1.39
HERC1-211ENST00000560983 RHPN1Q8TCX5 695 aa6.34□□□□□ -1.39
HERC1-211ENST00000560983 PRDM6Q9NQX0 595 aa6.34□□□□□ -1.39
HERC1-211ENST00000560983 ZNF777Q9ULD5 760 aaPredicted RBP6.34□□□□□ -1.39
HERC1-211ENST00000560983 PLXNC1O60486 1568 aa6.34□□□□□ -1.39
HERC1-211ENST00000560983 EP400Q96L91 3159 aa6.34□□□□□ -1.4
HERC1-211ENST00000560983 FGD6Q6ZV73 1430 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 SUPT6HQ7KZ85 1726 aaKnown RBP6.33□□□□□ -1.4
HERC1-211ENST00000560983 ATAD2Q6PL18 1390 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 ROBO1Q9Y6N7 1651 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 WASHC2CQ9Y4E1 1318 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 C1QTNF9BB2RNN3 333 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 TMEM132AQ24JP5 1023 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 SYT9Q86SS6 491 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 TSEN2Q8NCE0 465 aaKnown RBP6.33□□□□□ -1.4
HERC1-211ENST00000560983 GAS2L2Q8NHY3 880 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 GLMNQ92990 594 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 CLUAP1Q96AJ1 413 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 SLC30A3Q99726 388 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 PHACTR1Q9C0D0 580 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 PRR12Q9ULL5 1215 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 ZNF232Q9UNY5 417 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 MAFBQ9Y5Q3 323 aaPredicted RBP6.33□□□□□ -1.4
HERC1-211ENST00000560983 MYO5CQ9NQX4 1742 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 IQGAP1P46940 1657 aa6.33□□□□□ -1.4
HERC1-211ENST00000560983 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 KIF3BO15066 747 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 YY1P25490 414 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 CHRNA4P43681 627 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 TYRO3Q06418 890 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 SUSD3Q96L08 255 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 C2orf49Q9BVC5 232 aaPredicted RBP6.32□□□□□ -1.4
HERC1-211ENST00000560983 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
HERC1-211ENST00000560983 DHX29Q7Z478 1369 aaKnown RBP6.31□□□□□ -1.4
HERC1-211ENST00000560983 ATP7AQ04656 1500 aa6.31□□□□□ -1.4
HERC1-211ENST00000560983 MAP3K1Q13233 1512 aa6.31□□□□□ -1.4
HERC1-211ENST00000560983 A6NJR5 290 aa6.31□□□□□ -1.4
HERC1-211ENST00000560983 K7ELQ4 463 aaPredicted RBP6.31□□□□□ -1.4
HERC1-211ENST00000560983 KANK4Q5T7N3 995 aaPredicted RBP6.31□□□□□ -1.4
HERC1-211ENST00000560983 HSH2DQ96JZ2 352 aa6.31□□□□□ -1.4
HERC1-211ENST00000560983 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
HERC1-211ENST00000560983 TFIP11Q9UBB9 837 aaKnown RBP6.31□□□□□ -1.4
HERC1-211ENST00000560983 HCN4Q9Y3Q4 1203 aa6.31□□□□□ -1.4
HERC1-211ENST00000560983 XIRP1Q702N8 1843 aaKnown RBP6.3□□□□□ -1.4
HERC1-211ENST00000560983 LRRC9Q6ZRR7 1453 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 SCAF11Q99590 1463 aaKnown RBP6.3□□□□□ -1.4
HERC1-211ENST00000560983 SPEM2Q0P670 501 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 PTK7Q13308 1070 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 ZNF280CQ8ND82 737 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 NGLY1Q96IV0 654 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
HERC1-211ENST00000560983 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 CHMP3Q9Y3E7 222 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 CLIP1P30622 1438 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 KIAA1107Q9UPP5 1409 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 ITSN2Q9NZM3 1697 aa6.3□□□□□ -1.4
HERC1-211ENST00000560983 UTRNP46939 3433 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 COL16A1Q07092 1604 aaPredicted RBP6.29□□□□□ -1.4
HERC1-211ENST00000560983 PPP1R12BO60237 982 aaPredicted RBP6.29□□□□□ -1.4
HERC1-211ENST00000560983 SPATA31C1P0DKV0 1188 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 SEC13P55735 322 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 IER5Q5VY09 327 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 ALDH16A1Q8IZ83 802 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 SLC26A8Q96RN1 970 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 PPP1R12CQ9BZL4 782 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 KCNH4Q9UQ05 1017 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 ZC3H13Q5T200 1668 aaKnown RBP6.29□□□□□ -1.4
HERC1-211ENST00000560983 MSH6P52701 1360 aa6.29□□□□□ -1.4
HERC1-211ENST00000560983 NCOA2Q15596 1464 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 ARHGAP23Q9P227 1491 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 NID1P14543 1247 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 RASA1P20936 1047 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 ALAS2P22557 587 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 CRTC2Q53ET0 693 aaPredicted RBP6.28□□□□□ -1.4
HERC1-211ENST00000560983 DEFB132Q7Z7B7 95 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 NEUROD4Q9HD90 331 aa6.28□□□□□ -1.4
HERC1-211ENST00000560983 DMGDHQ9UI17 866 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms